RNA–Protein interactions for RNA: ENST00000544909.5

PAAF1-215, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 1 (best) BASIC

Gene PAAF1, Length 1,802 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-215ENST00000544909 COL4A3BPQ9Y5P4 624 aa13.82□□□□□ -0.2
PAAF1-215ENST00000544909 ATAD5Q96QE3 1844 aa13.82□□□□□ -0.2
PAAF1-215ENST00000544909 AFF2P51816 1311 aa13.82□□□□□ -0.2
PAAF1-215ENST00000544909 POTEMA6NI47 508 aa13.81□□□□□ -0.2
PAAF1-215ENST00000544909 TCP1P17987 556 aaKnown RBP13.81□□□□□ -0.2
PAAF1-215ENST00000544909 MMP14P50281 582 aa13.81□□□□□ -0.2
PAAF1-215ENST00000544909 ERMNQ8TAM6 284 aa13.81□□□□□ -0.2
PAAF1-215ENST00000544909 GMCL1Q96IK5 515 aa13.81□□□□□ -0.2
PAAF1-215ENST00000544909 PCMTD1Q96MG8 357 aaPredicted RBP13.81□□□□□ -0.2
PAAF1-215ENST00000544909 IFIH1Q9BYX4 1025 aaKnown RBP13.81□□□□□ -0.2
PAAF1-215ENST00000544909 SH2D4AQ9H788 454 aa13.81□□□□□ -0.2
PAAF1-215ENST00000544909 PI4KBQ9UBF8 816 aa13.81□□□□□ -0.2
PAAF1-215ENST00000544909 ATRNL1Q5VV63 1379 aa13.81□□□□□ -0.2
PAAF1-215ENST00000544909 PPP1R11O60927 126 aaPredicted RBP13.8□□□□□ -0.2
PAAF1-215ENST00000544909 OAS2P29728 719 aaKnown RBP13.8□□□□□ -0.2
PAAF1-215ENST00000544909 COASYQ13057 564 aa13.8□□□□□ -0.2
PAAF1-215ENST00000544909 SF3B2Q13435 895 aaKnown RBP13.8□□□□□ -0.2
PAAF1-215ENST00000544909 PICALMQ13492 652 aa13.8□□□□□ -0.2
PAAF1-215ENST00000544909 STRIP1Q5VSL9 837 aa13.8□□□□□ -0.2
PAAF1-215ENST00000544909 TATDN1Q6P1N9 297 aa13.8□□□□□ -0.2
PAAF1-215ENST00000544909 TMEM179Q6ZVK1 233 aa13.8□□□□□ -0.2
PAAF1-215ENST00000544909 NEK11Q8NG66 645 aa13.8□□□□□ -0.2
PAAF1-215ENST00000544909 MASTLQ96GX5 879 aa13.8□□□□□ -0.2
PAAF1-215ENST00000544909 FAM20AQ96MK3 541 aa13.8□□□□□ -0.2
PAAF1-215ENST00000544909 PNKPQ96T60 521 aa13.8□□□□□ -0.2
PAAF1-215ENST00000544909 CALCOCO1Q9P1Z2 691 aa13.8□□□□□ -0.2
PAAF1-215ENST00000544909 KIF11P52732 1056 aa13.8□□□□□ -0.2
PAAF1-215ENST00000544909 CCDC96Q2M329 555 aa13.8□□□□□ -0.2
PAAF1-215ENST00000544909 Q4G0T1 1027 aa13.8□□□□□ -0.2
PAAF1-215ENST00000544909 MEX3CQ5U5Q3 659 aaKnown RBP13.8□□□□□ -0.2
PAAF1-215ENST00000544909 FAM71BQ8TC56 605 aa13.8□□□□□ -0.2
PAAF1-215ENST00000544909 BAP1Q92560 729 aa13.8□□□□□ -0.2
PAAF1-215ENST00000544909 GPCPD1Q9NPB8 672 aa13.8□□□□□ -0.2
PAAF1-215ENST00000544909 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.8□□□□□ -0.2
PAAF1-215ENST00000544909 SERPINA10Q9UK55 444 aa13.8□□□□□ -0.2
PAAF1-215ENST00000544909 SNX12Q9UMY4 172 aa13.8□□□□□ -0.2
PAAF1-215ENST00000544909 MYH7BA7E2Y1 1941 aa13.79□□□□□ -0.2
PAAF1-215ENST00000544909 MARCH6O60337 910 aa13.79□□□□□ -0.2
PAAF1-215ENST00000544909 ABL1P00519 1130 aa13.79□□□□□ -0.2
PAAF1-215ENST00000544909 CIITAP33076 1130 aa13.79□□□□□ -0.2
PAAF1-215ENST00000544909 AARSP49588 968 aaKnown RBP eCLIP13.79□□□□□ -0.2
PAAF1-215ENST00000544909 ASTE1Q2TB18 679 aaPredicted RBP13.79□□□□□ -0.2
PAAF1-215ENST00000544909 SLC51AQ86UW1 340 aa13.79□□□□□ -0.2
PAAF1-215ENST00000544909 TRIM59Q8IWR1 403 aa13.79□□□□□ -0.2
PAAF1-215ENST00000544909 LACRTQ9GZZ8 138 aa13.79□□□□□ -0.2
PAAF1-215ENST00000544909 PANK4Q9NVE7 773 aa13.79□□□□□ -0.2
PAAF1-215ENST00000544909 ARHGAP20Q9P2F6 1191 aa13.79□□□□□ -0.2
PAAF1-215ENST00000544909 ATP1A1P05023 1023 aaKnown RBP13.78□□□□□ -0.2
PAAF1-215ENST00000544909 IDEP14735 1019 aa13.78□□□□□ -0.2
PAAF1-215ENST00000544909 MUTP22033 750 aa13.78□□□□□ -0.2
PAAF1-215ENST00000544909 SLC1A4P43007 532 aa13.78□□□□□ -0.2
PAAF1-215ENST00000544909 CRKP46108 304 aa13.78□□□□□ -0.2
PAAF1-215ENST00000544909 VSNL1P62760 191 aa13.78□□□□□ -0.2
PAAF1-215ENST00000544909 SLC9C1Q4G0N8 1177 aa13.78□□□□□ -0.2
PAAF1-215ENST00000544909 HSP90B2PQ58FF3 399 aa13.78□□□□□ -0.2
PAAF1-215ENST00000544909 C10orf76Q5T2E6 689 aa13.78□□□□□ -0.2
PAAF1-215ENST00000544909 FAM182BQ5T319 152 aa13.78□□□□□ -0.2
PAAF1-215ENST00000544909 PDXDC1Q6P996 788 aa13.78□□□□□ -0.2
PAAF1-215ENST00000544909 BTNL9Q6UXG8 535 aa13.78□□□□□ -0.2
PAAF1-215ENST00000544909 C2CD5Q86YS7 1000 aa13.78□□□□□ -0.2
PAAF1-215ENST00000544909 MMGT1Q8N4V1 131 aa13.78□□□□□ -0.2
PAAF1-215ENST00000544909 AMNQ9BXJ7 453 aa13.78□□□□□ -0.2
PAAF1-215ENST00000544909 ANO3Q9BYT9 981 aa13.78□□□□□ -0.2
PAAF1-215ENST00000544909 DEF6Q9H4E7 631 aa13.78□□□□□ -0.2
PAAF1-215ENST00000544909 FBXL5Q9UKA1 691 aa13.78□□□□□ -0.2
PAAF1-215ENST00000544909 DAAM1Q9Y4D1 1078 aa13.78□□□□□ -0.2
PAAF1-215ENST00000544909 PCDHA2Q9Y5H9 948 aa13.78□□□□□ -0.2
PAAF1-215ENST00000544909 PCDHA13Q9Y5I0 950 aa13.78□□□□□ -0.2
PAAF1-215ENST00000544909 SIPA1L1O43166 1804 aa13.78□□□□□ -0.2
PAAF1-215ENST00000544909 ARFGEF1Q9Y6D6 1849 aa13.78□□□□□ -0.2
PAAF1-215ENST00000544909 PIK3CDO00329 1044 aa13.78□□□□□ -0.2
PAAF1-215ENST00000544909 AKR1B10O60218 316 aa13.78□□□□□ -0.2
PAAF1-215ENST00000544909 RPA1P27694 616 aa13.78□□□□□ -0.2
PAAF1-215ENST00000544909 SREBF1P36956 1147 aa13.78□□□□□ -0.2
PAAF1-215ENST00000544909 CASP8Q14790 479 aa13.78□□□□□ -0.2
PAAF1-215ENST00000544909 QRICH1Q2TAL8 776 aa13.78□□□□□ -0.2
PAAF1-215ENST00000544909 GLE1Q53GS7 698 aaKnown RBP13.78□□□□□ -0.2
PAAF1-215ENST00000544909 MUM1L1Q5H9M0 696 aa13.78□□□□□ -0.2
PAAF1-215ENST00000544909 DYMQ7RTS9 669 aa13.78□□□□□ -0.2
PAAF1-215ENST00000544909 NOA1Q8NC60 698 aaKnown RBP13.78□□□□□ -0.2
PAAF1-215ENST00000544909 EPC1Q9H2F5 836 aa13.78□□□□□ -0.2
PAAF1-215ENST00000544909 ZSWIM4Q9H7M6 989 aa13.78□□□□□ -0.2
PAAF1-215ENST00000544909 ABCB6Q9NP58 842 aa13.78□□□□□ -0.2
PAAF1-215ENST00000544909 TRAF3IP3Q9Y228 551 aa13.78□□□□□ -0.2
PAAF1-215ENST00000544909 PCDHA1Q9Y5I3 950 aa13.78□□□□□ -0.2
PAAF1-215ENST00000544909 BZW2Q9Y6E2 419 aaKnown RBP13.78□□□□□ -0.2
PAAF1-215ENST00000544909 BTNL10A8MVZ5 291 aa13.77□□□□□ -0.21
PAAF1-215ENST00000544909 USP17L10C9JJH3 530 aa13.77□□□□□ -0.21
PAAF1-215ENST00000544909 PLSCR1O15162 318 aa13.77□□□□□ -0.21
PAAF1-215ENST00000544909 ENTPD3O75355 529 aa13.77□□□□□ -0.21
PAAF1-215ENST00000544909 SERPING1P05155 500 aa13.77□□□□□ -0.21
PAAF1-215ENST00000544909 CYP3A4P08684 503 aa13.77□□□□□ -0.21
PAAF1-215ENST00000544909 PLA2G4BP0C869 781 aa13.77□□□□□ -0.21
PAAF1-215ENST00000544909 TNFRSF8P28908 595 aa13.77□□□□□ -0.21
PAAF1-215ENST00000544909 CDC37Q16543 378 aaPredicted RBP13.77□□□□□ -0.21
PAAF1-215ENST00000544909 BMT2Q1RMZ1 405 aa13.77□□□□□ -0.21
PAAF1-215ENST00000544909 CERKLQ49MI3 558 aaPredicted RBP13.77□□□□□ -0.21
PAAF1-215ENST00000544909 NCAPH2Q6IBW4 605 aa13.77□□□□□ -0.21
PAAF1-215ENST00000544909 CACNA2D4Q7Z3S7 1137 aa13.77□□□□□ -0.21
PAAF1-215ENST00000544909 KCNK18Q7Z418 384 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms