RNA–Protein interactions for RNA: ENST00000544342.1

AL590560.1-203, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene AL590560.1, Length 408 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL590560.1-203ENST00000544342 GPNMBQ14956 572 aa9.38□□□□□ -0.91
AL590560.1-203ENST00000544342 CDC37Q16543 378 aaPredicted RBP9.38□□□□□ -0.91
AL590560.1-203ENST00000544342 ZNF618Q5T7W0 954 aa9.38□□□□□ -0.91
AL590560.1-203ENST00000544342 VPS53Q5VIR6 699 aa9.38□□□□□ -0.91
AL590560.1-203ENST00000544342 FAM117BQ6P1L5 589 aa9.38□□□□□ -0.91
AL590560.1-203ENST00000544342 SPRED2Q7Z698 418 aa9.38□□□□□ -0.91
AL590560.1-203ENST00000544342 TMCO2Q7Z6W1 182 aaPredicted RBP9.38□□□□□ -0.91
AL590560.1-203ENST00000544342 ALYREFQ86V81 257 aaKnown RBP9.38□□□□□ -0.91
AL590560.1-203ENST00000544342 FBXO11Q86XK2 927 aa9.38□□□□□ -0.91
AL590560.1-203ENST00000544342 SAMD3Q8N6K7 520 aa9.38□□□□□ -0.91
AL590560.1-203ENST00000544342 BANK1Q8NDB2 785 aa9.38□□□□□ -0.91
AL590560.1-203ENST00000544342 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.38□□□□□ -0.91
AL590560.1-203ENST00000544342 NEK9Q8TD19 979 aa9.38□□□□□ -0.91
AL590560.1-203ENST00000544342 SYTL5Q8TDW5 730 aaPredicted RBP9.38□□□□□ -0.91
AL590560.1-203ENST00000544342 KHSRPQ92945 711 aaKnown RBP eCLIP9.38□□□□□ -0.91
AL590560.1-203ENST00000544342 IPO9Q96P70 1041 aaKnown RBP9.38□□□□□ -0.91
AL590560.1-203ENST00000544342 CTAGE1Q96RT6 745 aa9.38□□□□□ -0.91
AL590560.1-203ENST00000544342 YME1L1Q96TA2 773 aa9.38□□□□□ -0.91
AL590560.1-203ENST00000544342 POP1Q99575 1024 aaKnown RBP9.38□□□□□ -0.91
AL590560.1-203ENST00000544342 KAT14Q9H8E8 782 aa9.38□□□□□ -0.91
AL590560.1-203ENST00000544342 MAP3K20Q9NYL2 800 aaKnown RBP9.38□□□□□ -0.91
AL590560.1-203ENST00000544342 DDX41Q9UJV9 622 aaKnown RBP9.38□□□□□ -0.91
AL590560.1-203ENST00000544342 RWDD3Q9Y3V2 267 aa9.38□□□□□ -0.91
AL590560.1-203ENST00000544342 COL4A6Q14031 1691 aa9.38□□□□□ -0.91
AL590560.1-203ENST00000544342 ZNF318Q5VUA4 2279 aa9.37□□□□□ -0.91
AL590560.1-203ENST00000544342 RSPH10B2B2RC85 870 aa9.37□□□□□ -0.91
AL590560.1-203ENST00000544342 HAS3O00219 553 aa9.37□□□□□ -0.91
AL590560.1-203ENST00000544342 RSPH10BP0C881 870 aa9.37□□□□□ -0.91
AL590560.1-203ENST00000544342 ZNF286BP0CG31 522 aa9.37□□□□□ -0.91
AL590560.1-203ENST00000544342 TGFB3P10600 412 aa9.37□□□□□ -0.91
AL590560.1-203ENST00000544342 GNAT1P11488 350 aa9.37□□□□□ -0.91
AL590560.1-203ENST00000544342 IL9P15248 144 aa9.37□□□□□ -0.91
AL590560.1-203ENST00000544342 EIF2AK2P19525 551 aaKnown RBP9.37□□□□□ -0.91
AL590560.1-203ENST00000544342 THPOP40225 353 aa9.37□□□□□ -0.91
AL590560.1-203ENST00000544342 GPM6BQ13491 265 aa9.37□□□□□ -0.91
AL590560.1-203ENST00000544342 EPC2Q52LR7 807 aa9.37□□□□□ -0.91
AL590560.1-203ENST00000544342 C20orf194Q5TEA3 1177 aa9.37□□□□□ -0.91
AL590560.1-203ENST00000544342 EP400NLQ6ZTU2 488 aa9.37□□□□□ -0.91
AL590560.1-203ENST00000544342 SERINC5Q86VE9 423 aa9.37□□□□□ -0.91
AL590560.1-203ENST00000544342 PNMA1Q8ND90 353 aa9.37□□□□□ -0.91
AL590560.1-203ENST00000544342 SP7Q8TDD2 431 aaPredicted RBP9.37□□□□□ -0.91
AL590560.1-203ENST00000544342 SEPT8Q92599 483 aa9.37□□□□□ -0.91
AL590560.1-203ENST00000544342 APBB2Q92870 758 aa9.37□□□□□ -0.91
AL590560.1-203ENST00000544342 PABPC5Q96DU9 382 aaKnown RBP9.37□□□□□ -0.91
AL590560.1-203ENST00000544342 TAAR1Q96RJ0 339 aa9.37□□□□□ -0.91
AL590560.1-203ENST00000544342 C17orf80Q9BSJ5 609 aa9.37□□□□□ -0.91
AL590560.1-203ENST00000544342 NSUN3Q9H649 340 aaKnown RBP9.37□□□□□ -0.91
AL590560.1-203ENST00000544342 CD320Q9NPF0 282 aa9.37□□□□□ -0.91
AL590560.1-203ENST00000544342 TRIOO75962 3097 aa9.37□□□□□ -0.91
AL590560.1-203ENST00000544342 WDFY4Q6ZS81 3184 aa9.36□□□□□ -0.91
AL590560.1-203ENST00000544342 CCDC171Q6TFL3 1326 aa9.36□□□□□ -0.91
AL590560.1-203ENST00000544342 C17orf102A2RUQ5 167 aa9.36□□□□□ -0.91
AL590560.1-203ENST00000544342 H3BNC9 293 aa9.36□□□□□ -0.91
AL590560.1-203ENST00000544342 ZNF213O14771 459 aa9.36□□□□□ -0.91
AL590560.1-203ENST00000544342 CFBP00751 764 aa9.36□□□□□ -0.91
AL590560.1-203ENST00000544342 NR3C2P08235 984 aa9.36□□□□□ -0.91
AL590560.1-203ENST00000544342 PARP1P09874 1014 aaKnown RBP9.36□□□□□ -0.91
AL590560.1-203ENST00000544342 GOLGA8HP0CJ92 632 aa9.36□□□□□ -0.91
AL590560.1-203ENST00000544342 HOXD8P13378 290 aaPredicted RBP9.36□□□□□ -0.91
AL590560.1-203ENST00000544342 MRE11P49959 708 aa9.36□□□□□ -0.91
AL590560.1-203ENST00000544342 HAND2P61296 217 aa9.36□□□□□ -0.91
AL590560.1-203ENST00000544342 TRIM71Q2Q1W2 868 aaKnown RBP9.36□□□□□ -0.91
AL590560.1-203ENST00000544342 PLEKHG4Q58EX7 1191 aa9.36□□□□□ -0.91
AL590560.1-203ENST00000544342 ADHFE1Q8IWW8 467 aa9.36□□□□□ -0.91
AL590560.1-203ENST00000544342 TMEM192Q8IY95 271 aa9.36□□□□□ -0.91
AL590560.1-203ENST00000544342 ADGRF4Q8IZF3 695 aa9.36□□□□□ -0.91
AL590560.1-203ENST00000544342 DBF4BQ8NFT6 615 aa9.36□□□□□ -0.91
AL590560.1-203ENST00000544342 ATP6V0A1Q93050 837 aa9.36□□□□□ -0.91
AL590560.1-203ENST00000544342 PPP2R3CQ969Q6 453 aa9.36□□□□□ -0.91
AL590560.1-203ENST00000544342 MFSD14AQ96MC6 490 aa9.36□□□□□ -0.91
AL590560.1-203ENST00000544342 SPATA33Q96N06 139 aa9.36□□□□□ -0.91
AL590560.1-203ENST00000544342 AMNQ9BXJ7 453 aa9.36□□□□□ -0.91
AL590560.1-203ENST00000544342 UBA5Q9GZZ9 404 aa9.36□□□□□ -0.91
AL590560.1-203ENST00000544342 PXMP2Q9NR77 195 aa9.36□□□□□ -0.91
AL590560.1-203ENST00000544342 TRIM6-TRIM34B2RNG4 842 aa9.35□□□□□ -0.91
AL590560.1-203ENST00000544342 H3BQ06 376 aaPredicted RBP9.35□□□□□ -0.91
AL590560.1-203ENST00000544342 H3BRB1 525 aa9.35□□□□□ -0.91
AL590560.1-203ENST00000544342 NOP56O00567 594 aaKnown RBP9.35□□□□□ -0.91
AL590560.1-203ENST00000544342 RB1P06400 928 aa9.35□□□□□ -0.91
AL590560.1-203ENST00000544342 QRICH1Q2TAL8 776 aa9.35□□□□□ -0.91
AL590560.1-203ENST00000544342 CELF3Q5SZQ8 465 aaKnown RBP9.35□□□□□ -0.91
AL590560.1-203ENST00000544342 MYSM1Q5VVJ2 828 aa9.35□□□□□ -0.91
AL590560.1-203ENST00000544342 TRAF7Q6Q0C0 670 aa9.35□□□□□ -0.91
AL590560.1-203ENST00000544342 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.35□□□□□ -0.91
AL590560.1-203ENST00000544342 TOP1MTQ969P6 601 aa9.35□□□□□ -0.91
AL590560.1-203ENST00000544342 PRRX2Q99811 253 aa9.35□□□□□ -0.91
AL590560.1-203ENST00000544342 C11orf84Q9BUA3 381 aaPredicted RBP9.35□□□□□ -0.91
AL590560.1-203ENST00000544342 IFIH1Q9BYX4 1025 aaKnown RBP9.35□□□□□ -0.91
AL590560.1-203ENST00000544342 LMAN2LQ9H0V9 348 aa9.35□□□□□ -0.91
AL590560.1-203ENST00000544342 TUT1Q9H6E5 874 aaKnown RBP9.35□□□□□ -0.91
AL590560.1-203ENST00000544342 MLXIPQ9HAP2 919 aa9.35□□□□□ -0.91
AL590560.1-203ENST00000544342 CLDND1Q9NY35 253 aa9.35□□□□□ -0.91
AL590560.1-203ENST00000544342 C5orf42Q9H799 3197 aa9.35□□□□□ -0.91
AL590560.1-203ENST00000544342 A0A0D9SFI3 127 aa9.34□□□□□ -0.91
AL590560.1-203ENST00000544342 POTEB3A0JP26 581 aa9.34□□□□□ -0.91
AL590560.1-203ENST00000544342 STAM2O75886 525 aa9.34□□□□□ -0.91
AL590560.1-203ENST00000544342 UPP2O95045 317 aa9.34□□□□□ -0.91
AL590560.1-203ENST00000544342 GGPS1O95749 300 aa9.34□□□□□ -0.91
AL590560.1-203ENST00000544342 MYCLP12524 364 aaPredicted RBP9.34□□□□□ -0.91
AL590560.1-203ENST00000544342 CCND2P30279 289 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms