RNA–Protein interactions for RNA: ENST00000544040.5

CHD4-210, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CHD4, Length 6,514 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-210ENST00000544040 H0Y3Z8 333 aa16.71■□□□□ 0.27
CHD4-210ENST00000544040 MEIS1O00470 390 aa16.71■□□□□ 0.27
CHD4-210ENST00000544040 TRIM67Q6ZTA4 783 aa16.71■□□□□ 0.27
CHD4-210ENST00000544040 TMEM232C9JQI7 657 aa16.71■□□□□ 0.27
CHD4-210ENST00000544040 XPAP23025 273 aaPredicted RBP16.71■□□□□ 0.27
CHD4-210ENST00000544040 YWHAHQ04917 246 aaPredicted RBP16.71■□□□□ 0.27
CHD4-210ENST00000544040 CERKLQ49MI3 558 aaPredicted RBP16.71■□□□□ 0.27
CHD4-210ENST00000544040 PI4K2BQ8TCG2 481 aa16.71■□□□□ 0.27
CHD4-210ENST00000544040 FTOQ9C0B1 505 aaKnown RBP eCLIP16.71■□□□□ 0.274e-11■■□□□ 11.8
CHD4-210ENST00000544040 IRAK4Q9NWZ3 460 aa16.71■□□□□ 0.27
CHD4-210ENST00000544040 PHLPP2Q6ZVD8 1323 aa16.71■□□□□ 0.27
CHD4-210ENST00000544040 PSMC2P35998 433 aaKnown RBP16.71■□□□□ 0.27
CHD4-210ENST00000544040 DOK7Q18PE1 504 aa16.71■□□□□ 0.27
CHD4-210ENST00000544040 ZC3H18Q86VM9 953 aaKnown RBP16.71■□□□□ 0.27
CHD4-210ENST00000544040 CACTINQ8WUQ7 758 aaKnown RBP16.71■□□□□ 0.27
CHD4-210ENST00000544040 ZC4H2Q9NQZ6 224 aa16.71■□□□□ 0.27
CHD4-210ENST00000544040 MAN1B1Q9UKM7 699 aa16.71■□□□□ 0.27
CHD4-210ENST00000544040 H3BRJ5 948 aa16.71■□□□□ 0.27
CHD4-210ENST00000544040 TRIM59Q8IWR1 403 aa16.71■□□□□ 0.27
CHD4-210ENST00000544040 CENPKQ9BS16 269 aa16.71■□□□□ 0.27
CHD4-210ENST00000544040 UBE2TQ9NPD8 197 aaPredicted RBP16.71■□□□□ 0.27
CHD4-210ENST00000544040 GINM1Q9NU53 330 aa16.71■□□□□ 0.27
CHD4-210ENST00000544040 JRKLQ9Y4A0 524 aa16.71■□□□□ 0.27
CHD4-210ENST00000544040 PPIP5K2O43314 1243 aa16.71■□□□□ 0.27
CHD4-210ENST00000544040 ATG16L1Q676U5 607 aa16.71■□□□□ 0.27
CHD4-210ENST00000544040 SLC24A3Q9HC58 644 aa16.71■□□□□ 0.27
CHD4-210ENST00000544040 ABCB6Q9NP58 842 aa16.71■□□□□ 0.27
CHD4-210ENST00000544040 RASGRF2O14827 1237 aa16.7■□□□□ 0.26
CHD4-210ENST00000544040 ACSL3O95573 720 aa16.7■□□□□ 0.26
CHD4-210ENST00000544040 EIF3CLB5ME19 914 aaKnown RBP16.7■□□□□ 0.26
CHD4-210ENST00000544040 NIM1KQ8IY84 436 aa16.7■□□□□ 0.26
CHD4-210ENST00000544040 LARP4BQ92615 738 aaKnown RBP16.7■□□□□ 0.26
CHD4-210ENST00000544040 TSC22D3Q99576 134 aa16.7■□□□□ 0.26
CHD4-210ENST00000544040 EIF3CQ99613 913 aaKnown RBP16.7■□□□□ 0.26
CHD4-210ENST00000544040 CHL1O00533 1208 aa16.7■□□□□ 0.26
CHD4-210ENST00000544040 PDE6AP16499 860 aa16.7■□□□□ 0.26
CHD4-210ENST00000544040 NOP14P78316 857 aaKnown RBP16.7■□□□□ 0.26
CHD4-210ENST00000544040 AOC3Q16853 763 aa16.7■□□□□ 0.26
CHD4-210ENST00000544040 ANKRD36BP1Q96IX9 119 aa16.7■□□□□ 0.26
CHD4-210ENST00000544040 ELAC2Q9BQ52 826 aaKnown RBP16.7■□□□□ 0.26
CHD4-210ENST00000544040 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.7■□□□□ 0.26
CHD4-210ENST00000544040 BTDP43251 543 aa16.7■□□□□ 0.26
CHD4-210ENST00000544040 ARHGDIAP52565 204 aa16.7■□□□□ 0.26
CHD4-210ENST00000544040 ST13P4Q8IZP2 240 aaPredicted RBP16.7■□□□□ 0.26
CHD4-210ENST00000544040 P2RX5Q93086 422 aa16.7■□□□□ 0.26
CHD4-210ENST00000544040 KIF19Q2TAC6 998 aa16.7■□□□□ 0.26
CHD4-210ENST00000544040 RSRC2Q7L4I2 434 aaKnown RBP16.7■□□□□ 0.26
CHD4-210ENST00000544040 HOOK2Q96ED9 719 aa16.7■□□□□ 0.26
CHD4-210ENST00000544040 PPP1R16BQ96T49 567 aa16.7■□□□□ 0.26
CHD4-210ENST00000544040 SFMBT1Q9UHJ3 866 aa16.7■□□□□ 0.26
CHD4-210ENST00000544040 CCPG1Q9ULG6 757 aa16.7■□□□□ 0.26
CHD4-210ENST00000544040 Q3C1V9 767 aa16.7■□□□□ 0.26
CHD4-210ENST00000544040 FAM186BQ8IYM0 893 aa16.7■□□□□ 0.26
CHD4-210ENST00000544040 KCNV2Q8TDN2 545 aa16.7■□□□□ 0.26
CHD4-210ENST00000544040 ZMYND12Q9H0C1 365 aa16.7■□□□□ 0.26
CHD4-210ENST00000544040 SMYD3Q9H7B4 428 aa16.7■□□□□ 0.26
CHD4-210ENST00000544040 YY1AP1Q9H869 796 aa16.7■□□□□ 0.26
CHD4-210ENST00000544040 SAMSN1Q9NSI8 373 aaKnown RBP16.7■□□□□ 0.26
CHD4-210ENST00000544040 AKT3Q9Y243 479 aa16.7■□□□□ 0.26
CHD4-210ENST00000544040 PCDHA13Q9Y5I0 950 aa16.7■□□□□ 0.26
CHD4-210ENST00000544040 A0A0G2JND7 137 aa16.69■□□□□ 0.26
CHD4-210ENST00000544040 EIF4A3P38919 411 aaKnown RBP16.69■□□□□ 0.26
CHD4-210ENST00000544040 OCRLQ01968 901 aa16.69■□□□□ 0.26
CHD4-210ENST00000544040 ADCK5Q3MIX3 580 aa16.69■□□□□ 0.26
CHD4-210ENST00000544040 BBS9Q3SYG4 887 aa16.69■□□□□ 0.26
CHD4-210ENST00000544040 LRRC24Q50LG9 513 aa16.69■□□□□ 0.26
CHD4-210ENST00000544040 SPICE1Q8N0Z3 855 aa16.69■□□□□ 0.26
CHD4-210ENST00000544040 NRBF2Q96F24 287 aa16.69■□□□□ 0.26
CHD4-210ENST00000544040 GCNT4Q9P109 453 aa16.69■□□□□ 0.26
CHD4-210ENST00000544040 TRPM2O94759 1503 aa16.69■□□□□ 0.26
CHD4-210ENST00000544040 URB2Q14146 1524 aaKnown RBP16.69■□□□□ 0.26
CHD4-210ENST00000544040 TOM1O60784 492 aa16.69■□□□□ 0.26
CHD4-210ENST00000544040 PDHA1P08559 390 aa16.69■□□□□ 0.26
CHD4-210ENST00000544040 SLMAPQ14BN4 828 aa16.69■□□□□ 0.26
CHD4-210ENST00000544040 C16orf87Q6PH81 154 aa16.69■□□□□ 0.26
CHD4-210ENST00000544040 ZBTB33Q86T24 672 aa16.69■□□□□ 0.26
CHD4-210ENST00000544040 C7orf31Q8N865 590 aa16.69■□□□□ 0.26
CHD4-210ENST00000544040 TDRD7Q8NHU6 1098 aaKnown RBP16.69■□□□□ 0.26
CHD4-210ENST00000544040 ZMYM4Q5VZL5 1548 aa16.69■□□□□ 0.26
CHD4-210ENST00000544040 DDAH1O94760 285 aa16.69■□□□□ 0.26
CHD4-210ENST00000544040 KITP10721 976 aa16.69■□□□□ 0.26
CHD4-210ENST00000544040 DR1Q01658 176 aa16.69■□□□□ 0.26
CHD4-210ENST00000544040 RPS6KC1Q96S38 1066 aa16.69■□□□□ 0.26
CHD4-210ENST00000544040 CNOT10Q9H9A5 744 aaKnown RBP16.69■□□□□ 0.26
CHD4-210ENST00000544040 H0YCG3 227 aa16.69■□□□□ 0.26
CHD4-210ENST00000544040 SOX5P35711 763 aa16.69■□□□□ 0.26
CHD4-210ENST00000544040 ICA1Q05084 483 aa16.69■□□□□ 0.26
CHD4-210ENST00000544040 ATP8B1O43520 1251 aa16.69■□□□□ 0.26
CHD4-210ENST00000544040 CASP8Q14790 479 aa16.69■□□□□ 0.26
CHD4-210ENST00000544040 GRAMD4Q6IC98 578 aa16.69■□□□□ 0.26
CHD4-210ENST00000544040 EAF2Q96CJ1 260 aaPredicted RBP16.69■□□□□ 0.26
CHD4-210ENST00000544040 AS3MTQ9HBK9 375 aa16.69■□□□□ 0.26
CHD4-210ENST00000544040 NFU1Q9UMS0 254 aa16.69■□□□□ 0.26
CHD4-210ENST00000544040 CD58P19256 250 aa16.68■□□□□ 0.26
CHD4-210ENST00000544040 BPIFB4P59827 614 aa16.68■□□□□ 0.26
CHD4-210ENST00000544040 NUGGCQ68CJ6 796 aa16.68■□□□□ 0.26
CHD4-210ENST00000544040 ACTR5Q9H9F9 607 aaPredicted RBP16.68■□□□□ 0.26
CHD4-210ENST00000544040 SPC25Q9HBM1 224 aa16.68■□□□□ 0.26
CHD4-210ENST00000544040 STK32BQ9NY57 414 aa16.68■□□□□ 0.26
CHD4-210ENST00000544040 ARPP19P56211 112 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms