RNA–Protein interactions for RNA: ENST00000543939.5

COPS7A-218, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 1,728 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-218ENST00000543939 ERMNQ8TAM6 284 aa22.22■■□□□ 1.15
COPS7A-218ENST00000543939 CLMNQ96JQ2 1002 aa22.22■■□□□ 1.15
COPS7A-218ENST00000543939 MXRA8Q9BRK3 442 aa22.22■■□□□ 1.15
COPS7A-218ENST00000543939 IFNKQ9P0W0 207 aa22.22■■□□□ 1.15
COPS7A-218ENST00000543939 GDAQ9Y2T3 454 aa22.22■■□□□ 1.15
COPS7A-218ENST00000543939 SYNRGQ9UMZ2 1314 aa22.21■■□□□ 1.15
COPS7A-218ENST00000543939 SPDYE5A6NIY4 337 aa22.21■■□□□ 1.15
COPS7A-218ENST00000543939 PSMD10O75832 226 aa22.21■■□□□ 1.15
COPS7A-218ENST00000543939 TREML2Q5T2D2 321 aa22.21■■□□□ 1.15
COPS7A-218ENST00000543939 SPATA1Q5VX52 437 aa22.21■■□□□ 1.15
COPS7A-218ENST00000543939 RNF207Q6ZRF8 634 aa22.21■■□□□ 1.15
COPS7A-218ENST00000543939 DRC7Q8IY82 874 aa22.21■■□□□ 1.15
COPS7A-218ENST00000543939 IL31RAQ8NI17 732 aa22.21■■□□□ 1.15
COPS7A-218ENST00000543939 TAAR1Q96RJ0 339 aa22.21■■□□□ 1.15
COPS7A-218ENST00000543939 LRRC27Q9C0I9 530 aa22.21■■□□□ 1.15
COPS7A-218ENST00000543939 EIF2AK3Q9NZJ5 1116 aaKnown RBP22.21■■□□□ 1.15
COPS7A-218ENST00000543939 KIAA1024Q9UPX6 916 aa22.21■■□□□ 1.15
COPS7A-218ENST00000543939 A0A0G2JMZ2 1700 aa22.21■■□□□ 1.15
COPS7A-218ENST00000543939 A0A0G2JLL6 359 aaPredicted RBP22.2■■□□□ 1.14
COPS7A-218ENST00000543939 POTEB3A0JP26 581 aa22.2■■□□□ 1.14
COPS7A-218ENST00000543939 CXCL11O14625 94 aa22.2■■□□□ 1.14
COPS7A-218ENST00000543939 IRF6O14896 467 aa22.2■■□□□ 1.14
COPS7A-218ENST00000543939 TTLL12Q14166 644 aaPredicted RBP22.2■■□□□ 1.14
COPS7A-218ENST00000543939 PCNX4Q63HM2 1172 aa22.2■■□□□ 1.14
COPS7A-218ENST00000543939 POTEBQ6S5H4 581 aa22.2■■□□□ 1.14
COPS7A-218ENST00000543939 NIPA1Q7RTP0 329 aa22.2■■□□□ 1.14
COPS7A-218ENST00000543939 PRRT2Q7Z6L0 340 aaPredicted RBP22.2■■□□□ 1.14
COPS7A-218ENST00000543939 GIMAP8Q8ND71 665 aaPredicted RBP22.2■■□□□ 1.14
COPS7A-218ENST00000543939 CCDC47Q96A33 483 aaKnown RBP22.2■■□□□ 1.14
COPS7A-218ENST00000543939 OTUD5Q96G74 571 aa22.2■■□□□ 1.14
COPS7A-218ENST00000543939 TEX13BQ9BXU2 312 aa22.2■■□□□ 1.14
COPS7A-218ENST00000543939 XPO4Q9C0E2 1151 aaKnown RBP22.2■■□□□ 1.14
COPS7A-218ENST00000543939 SRCAPQ6ZRS2 3230 aa22.2■■□□□ 1.14
COPS7A-218ENST00000543939 SPATA31C1P0DKV0 1188 aa22.2■■□□□ 1.14
COPS7A-218ENST00000543939 ARP10275 920 aa22.2■■□□□ 1.14
COPS7A-218ENST00000543939 BCRP11274 1271 aa22.2■■□□□ 1.14
COPS7A-218ENST00000543939 RPA1P27694 616 aa22.2■■□□□ 1.14
COPS7A-218ENST00000543939 PRCPP42785 496 aa22.2■■□□□ 1.14
COPS7A-218ENST00000543939 PPP2R5CQ13362 524 aa22.2■■□□□ 1.14
COPS7A-218ENST00000543939 TKFCQ3LXA3 575 aa22.2■■□□□ 1.14
COPS7A-218ENST00000543939 NSMFQ6X4W1 530 aa22.2■■□□□ 1.14
COPS7A-218ENST00000543939 OTOP1Q7RTM1 612 aa22.2■■□□□ 1.14
COPS7A-218ENST00000543939 CATSPER3Q86XQ3 398 aa22.2■■□□□ 1.14
COPS7A-218ENST00000543939 PROCA1Q8NCQ7 364 aaPredicted RBP22.2■■□□□ 1.14
COPS7A-218ENST00000543939 ZFP91Q96JP5 570 aaPredicted RBP22.2■■□□□ 1.14
COPS7A-218ENST00000543939 RWDD2AQ9UIY3 292 aa22.2■■□□□ 1.14
COPS7A-218ENST00000543939 CTNND2Q9UQB3 1225 aa22.2■■□□□ 1.14
COPS7A-218ENST00000543939 ZKSCAN5Q9Y2L8 839 aa22.2■■□□□ 1.14
COPS7A-218ENST00000543939 PVALEFA0A1B0GWK0 134 aa22.19■■□□□ 1.14
COPS7A-218ENST00000543939 TPM3P06753 285 aa22.19■■□□□ 1.14
COPS7A-218ENST00000543939 ITGB5P18084 799 aa22.19■■□□□ 1.14
COPS7A-218ENST00000543939 STX17P56962 302 aa22.19■■□□□ 1.14
COPS7A-218ENST00000543939 LRCH2Q5VUJ6 765 aa22.19■■□□□ 1.14
COPS7A-218ENST00000543939 ADSSL1Q8N142 457 aa22.19■■□□□ 1.14
COPS7A-218ENST00000543939 FAM43AQ8N2R8 423 aa22.19■■□□□ 1.14
COPS7A-218ENST00000543939 GTPBP4Q9BZE4 634 aaKnown RBP22.19■■□□□ 1.14
COPS7A-218ENST00000543939 EXOC1Q9NV70 894 aa22.19■■□□□ 1.14
COPS7A-218ENST00000543939 KCNH4Q9UQ05 1017 aa22.19■■□□□ 1.14
COPS7A-218ENST00000543939 UBIAD1Q9Y5Z9 338 aa22.19■■□□□ 1.14
COPS7A-218ENST00000543939 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP22.19■■□□□ 1.14
COPS7A-218ENST00000543939 E9PMD0 336 aa22.18■■□□□ 1.14
COPS7A-218ENST00000543939 EML1O00423 815 aa22.18■■□□□ 1.14
COPS7A-218ENST00000543939 HOXA7P31268 230 aaPredicted RBP22.18■■□□□ 1.14
COPS7A-218ENST00000543939 PDE4DQ08499 809 aa22.18■■□□□ 1.14
COPS7A-218ENST00000543939 PAK1Q13153 545 aa22.18■■□□□ 1.14
COPS7A-218ENST00000543939 PPIL2Q13356 520 aa22.18■■□□□ 1.14
COPS7A-218ENST00000543939 UNC13DQ70J99 1090 aa22.18■■□□□ 1.14
COPS7A-218ENST00000543939 ARMC9Q7Z3E5 817 aa22.18■■□□□ 1.14
COPS7A-218ENST00000543939 ZNF577Q9BSK1 485 aa22.18■■□□□ 1.14
COPS7A-218ENST00000543939 POLR3CQ9BUI4 534 aaPredicted RBP22.18■■□□□ 1.14
COPS7A-218ENST00000543939 MAF1Q9H063 256 aa22.18■■□□□ 1.14
COPS7A-218ENST00000543939 SAMSN1Q9NSI8 373 aaKnown RBP22.18■■□□□ 1.14
COPS7A-218ENST00000543939 MRPS9P82933 396 aaKnown RBP22.17■■□□□ 1.14
COPS7A-218ENST00000543939 BAATQ14032 418 aaPredicted RBP22.17■■□□□ 1.14
COPS7A-218ENST00000543939 PGM5Q15124 567 aa22.17■■□□□ 1.14
COPS7A-218ENST00000543939 NELFBQ8WX92 580 aa22.17■■□□□ 1.14
COPS7A-218ENST00000543939 PXMP2Q9NR77 195 aa22.17■■□□□ 1.14
COPS7A-218ENST00000543939 NRBP1Q9UHY1 535 aa22.17■■□□□ 1.14
COPS7A-218ENST00000543939 POTEFA5A3E0 1075 aa22.17■■□□□ 1.14
COPS7A-218ENST00000543939 SERPINC1P01008 464 aa22.17■■□□□ 1.14
COPS7A-218ENST00000543939 PLA2G4BP0C869 781 aa22.17■■□□□ 1.14
COPS7A-218ENST00000543939 POTEIP0CG38 1075 aa22.17■■□□□ 1.14
COPS7A-218ENST00000543939 LDLRAD1Q5T700 205 aa22.17■■□□□ 1.14
COPS7A-218ENST00000543939 POTEGQ6S5H5 508 aa22.17■■□□□ 1.14
COPS7A-218ENST00000543939 POTEEQ6S8J3 1075 aa22.17■■□□□ 1.14
COPS7A-218ENST00000543939 B3GNT9Q6UX72 402 aa22.17■■□□□ 1.14
COPS7A-218ENST00000543939 GADL1Q6ZQY3 521 aa22.17■■□□□ 1.14
COPS7A-218ENST00000543939 DDX12PQ92771 950 aa22.17■■□□□ 1.14
COPS7A-218ENST00000543939 RMDN3Q96TC7 470 aa22.17■■□□□ 1.14
COPS7A-218ENST00000543939 RIT2Q99578 217 aa22.17■■□□□ 1.14
COPS7A-218ENST00000543939 EIF2AK1Q9BQI3 630 aaKnown RBP22.17■■□□□ 1.14
COPS7A-218ENST00000543939 PDCD2LQ9BRP1 358 aa22.17■■□□□ 1.14
COPS7A-218ENST00000543939 WDR11Q9BZH6 1224 aa22.17■■□□□ 1.14
COPS7A-218ENST00000543939 RRAGDQ9NQL2 400 aaPredicted RBP22.17■■□□□ 1.14
COPS7A-218ENST00000543939 IPO5O00410 1097 aaKnown RBP22.16■■□□□ 1.14
COPS7A-218ENST00000543939 CBFA2T2O43439 604 aa22.16■■□□□ 1.14
COPS7A-218ENST00000543939 GAS7O60861 476 aa22.16■■□□□ 1.14
COPS7A-218ENST00000543939 EIF2AK2P19525 551 aaKnown RBP22.16■■□□□ 1.14
COPS7A-218ENST00000543939 UBASH3AP57075 661 aa22.16■■□□□ 1.14
COPS7A-218ENST00000543939 COBLL1Q53SF7 1204 aa22.16■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms