RNA–Protein interactions for RNA: ENST00000543210.6

ABR-204, Transcript of ABR, RhoGEF and GTPase activating protein, humanhuman

TSL 2 BASIC

Gene ABR, Length 1,049 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABR-204ENST00000543210 TRIM22Q8IYM9 498 aa20.57■□□□□ 0.88
ABR-204ENST00000543210 ZFP91Q96JP5 570 aaPredicted RBP20.57■□□□□ 0.88
ABR-204ENST00000543210 POLR3EQ9NVU0 708 aa20.57■□□□□ 0.88
ABR-204ENST00000543210 DDX41Q9UJV9 622 aaKnown RBP20.57■□□□□ 0.88
ABR-204ENST00000543210 A6NJR5 290 aa20.56■□□□□ 0.88
ABR-204ENST00000543210 NEK4P51957 841 aa20.56■□□□□ 0.88
ABR-204ENST00000543210 SSRP1Q08945 709 aaKnown RBP20.56■□□□□ 0.88
ABR-204ENST00000543210 PCNX4Q63HM2 1172 aa20.56■□□□□ 0.88
ABR-204ENST00000543210 XRRA1Q6P2D8 792 aa20.56■□□□□ 0.88
ABR-204ENST00000543210 SLKQ9H2G2 1235 aaPredicted RBP20.56■□□□□ 0.88
ABR-204ENST00000543210 RGS20O76081 388 aa20.55■□□□□ 0.88
ABR-204ENST00000543210 MYL3P08590 195 aa20.55■□□□□ 0.88
ABR-204ENST00000543210 TGFB3P10600 412 aa20.55■□□□□ 0.88
ABR-204ENST00000543210 AK2P54819 239 aa20.55■□□□□ 0.88
ABR-204ENST00000543210 MRPS9P82933 396 aaKnown RBP20.55■□□□□ 0.88
ABR-204ENST00000543210 FPGSQ05932 587 aa20.55■□□□□ 0.88
ABR-204ENST00000543210 PKN1Q16512 942 aa20.55■□□□□ 0.88
ABR-204ENST00000543210 SEZ6LQ9BYH1 1024 aa20.55■□□□□ 0.88
ABR-204ENST00000543210 RTEL1Q9NZ71 1219 aa20.55■□□□□ 0.88
ABR-204ENST00000543210 PCDHA6Q9UN73 950 aa20.55■□□□□ 0.88
ABR-204ENST00000543210 PCDHA8Q9Y5H6 950 aa20.55■□□□□ 0.88
ABR-204ENST00000543210 TLR3O15455 904 aaKnown RBP20.54■□□□□ 0.88
ABR-204ENST00000543210 KPNA6O60684 536 aa20.54■□□□□ 0.88
ABR-204ENST00000543210 FOSP01100 380 aaPredicted RBP20.54■□□□□ 0.88
ABR-204ENST00000543210 MFSD5Q6N075 450 aa20.54■□□□□ 0.88
ABR-204ENST00000543210 Q7L0L9 218 aa20.54■□□□□ 0.88
ABR-204ENST00000543210 DHX37Q8IY37 1157 aaKnown RBP20.54■□□□□ 0.88
ABR-204ENST00000543210 TRPV6Q9H1D0 765 aa20.54■□□□□ 0.88
ABR-204ENST00000543210 C6orf50Q9HD87 102 aa20.54■□□□□ 0.88
ABR-204ENST00000543210 TPCN1Q9ULQ1 816 aa20.54■□□□□ 0.88
ABR-204ENST00000543210 LAMA2P24043 3122 aaKnown RBP20.54■□□□□ 0.88
ABR-204ENST00000543210 B4GALT4O60513 344 aa20.53■□□□□ 0.88
ABR-204ENST00000543210 CDKL5O76039 1030 aa20.53■□□□□ 0.88
ABR-204ENST00000543210 ARHGAP1Q07960 439 aa20.53■□□□□ 0.88
ABR-204ENST00000543210 LAMC2Q13753 1193 aa20.53■□□□□ 0.88
ABR-204ENST00000543210 C16orf59Q7L2K0 433 aa20.53■□□□□ 0.88
ABR-204ENST00000543210 NLRX1Q86UT6 975 aa20.53■□□□□ 0.88
ABR-204ENST00000543210 DEFB123Q8N688 67 aa20.53■□□□□ 0.88
ABR-204ENST00000543210 CCDC148Q8NFR7 591 aa20.53■□□□□ 0.88
ABR-204ENST00000543210 AFG1LQ8WV93 481 aa20.53■□□□□ 0.88
ABR-204ENST00000543210 INPP4AQ96PE3 977 aaPredicted RBP20.53■□□□□ 0.88
ABR-204ENST00000543210 PPP1R12CQ9BZL4 782 aa20.53■□□□□ 0.88
ABR-204ENST00000543210 UPF2Q9HAU5 1272 aaKnown RBP20.53■□□□□ 0.88
ABR-204ENST00000543210 ESYT2A0FGR8 921 aa20.52■□□□□ 0.88
ABR-204ENST00000543210 FIBPO43427 364 aa20.52■□□□□ 0.88
ABR-204ENST00000543210 PFKFB2O60825 505 aa20.52■□□□□ 0.88
ABR-204ENST00000543210 GNA11P29992 359 aa20.52■□□□□ 0.88
ABR-204ENST00000543210 SCRN1Q12765 414 aa20.52■□□□□ 0.88
ABR-204ENST00000543210 AP3B2Q13367 1082 aa20.52■□□□□ 0.88
ABR-204ENST00000543210 EMID1Q96A84 441 aaPredicted RBP20.52■□□□□ 0.88
ABR-204ENST00000543210 MTG1Q9BT17 334 aaPredicted RBP20.52■□□□□ 0.88
ABR-204ENST00000543210 C22orf23Q9BZE7 217 aa20.52■□□□□ 0.88
ABR-204ENST00000543210 ZMYND12Q9H0C1 365 aa20.52■□□□□ 0.88
ABR-204ENST00000543210 UMODL1Q5DID0 1318 aa20.52■□□□□ 0.87
ABR-204ENST00000543210 MYH7BA7E2Y1 1941 aa20.51■□□□□ 0.87
ABR-204ENST00000543210 SORBS3O60504 671 aa20.51■□□□□ 0.87
ABR-204ENST00000543210 DEXIO95424 95 aa20.51■□□□□ 0.87
ABR-204ENST00000543210 GGPS1O95749 300 aa20.51■□□□□ 0.87
ABR-204ENST00000543210 MMP3P08254 477 aa20.51■□□□□ 0.87
ABR-204ENST00000543210 UBA1P22314 1058 aaKnown RBP20.51■□□□□ 0.87
ABR-204ENST00000543210 CYP2C18P33260 490 aa20.51■□□□□ 0.87
ABR-204ENST00000543210 CELF3Q5SZQ8 465 aaKnown RBP20.51■□□□□ 0.87
ABR-204ENST00000543210 BICD2Q8TD16 824 aa20.51■□□□□ 0.87
ABR-204ENST00000543210 PGBD1Q96JS3 809 aa20.51■□□□□ 0.87
ABR-204ENST00000543210 ANO3Q9BYT9 981 aa20.51■□□□□ 0.87
ABR-204ENST00000543210 MLXIPQ9HAP2 919 aa20.51■□□□□ 0.87
ABR-204ENST00000543210 MTMR10Q9NXD2 777 aa20.51■□□□□ 0.87
ABR-204ENST00000543210 VPS54Q9P1Q0 977 aa20.51■□□□□ 0.87
ABR-204ENST00000543210 SPATA31C2B4DYI2 1134 aa20.5■□□□□ 0.87
ABR-204ENST00000543210 CSF2RAP15509 400 aa20.5■□□□□ 0.87
ABR-204ENST00000543210 ICAM3P32942 547 aa20.5■□□□□ 0.87
ABR-204ENST00000543210 CLK2P49760 499 aaKnown RBP20.5■□□□□ 0.87
ABR-204ENST00000543210 SP2Q02086 613 aa20.5■□□□□ 0.87
ABR-204ENST00000543210 NEDD9Q14511 834 aa20.5■□□□□ 0.87
ABR-204ENST00000543210 DGKDQ16760 1214 aa20.5■□□□□ 0.87
ABR-204ENST00000543210 NBPF20Q3BBV1 942 aa20.5■□□□□ 0.87
ABR-204ENST00000543210 MYSM1Q5VVJ2 828 aa20.5■□□□□ 0.87
ABR-204ENST00000543210 MCTP2Q6DN12 878 aa20.5■□□□□ 0.87
ABR-204ENST00000543210 FAM109BQ6ICB4 259 aaPredicted RBP20.5■□□□□ 0.87
ABR-204ENST00000543210 REXO1Q8N1G1 1221 aaKnown RBP20.5■□□□□ 0.87
ABR-204ENST00000543210 PPTC7Q8NI37 304 aa20.5■□□□□ 0.87
ABR-204ENST00000543210 PPP1R13LQ8WUF5 828 aa20.5■□□□□ 0.87
ABR-204ENST00000543210 CDHR1Q96JP9 859 aa20.5■□□□□ 0.87
ABR-204ENST00000543210 SPATA33Q96N06 139 aa20.5■□□□□ 0.87
ABR-204ENST00000543210 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.5■□□□□ 0.87
ABR-204ENST00000543210 NOC4LQ9BVI4 516 aaKnown RBP20.5■□□□□ 0.87
ABR-204ENST00000543210 SH3GLB2Q9NR46 395 aa20.5■□□□□ 0.87
ABR-204ENST00000543210 TMEM260Q9NX78 707 aa20.5■□□□□ 0.87
ABR-204ENST00000543210 NLRP5P59047 1200 aa20.49■□□□□ 0.87
ABR-204ENST00000543210 PPIGQ13427 754 aaKnown RBP eCLIP20.49■□□□□ 0.87
ABR-204ENST00000543210 TMEM240Q5SV17 173 aa20.49■□□□□ 0.87
ABR-204ENST00000543210 JAKMIP3Q5VZ66 844 aa20.49■□□□□ 0.87
ABR-204ENST00000543210 GPRASP2Q96D09 838 aa20.49■□□□□ 0.87
ABR-204ENST00000543210 RNPC3Q96LT9 517 aaKnown RBP20.49■□□□□ 0.87
ABR-204ENST00000543210 HIPK3Q9H422 1215 aa20.49■□□□□ 0.87
ABR-204ENST00000543210 TRMT13Q9NUP7 481 aaKnown RBP20.49■□□□□ 0.87
ABR-204ENST00000543210 GTF3C3Q9Y5Q9 886 aa20.49■□□□□ 0.87
ABR-204ENST00000543210 NOP56O00567 594 aaKnown RBP20.48■□□□□ 0.87
ABR-204ENST00000543210 CHMP4BP1P59074 171 aa20.48■□□□□ 0.87
ABR-204ENST00000543210 MTMR1Q13613 665 aa20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms