RNA–Protein interactions for RNA: ENST00000543046.1

MDM2-229, Transcript of MDM2 proto-oncogene, humanhuman

TSL 3

Gene MDM2, Length 432 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-229ENST00000543046 TRIM61Q5EBN2 209 aa5.93□□□□□ -1.46
MDM2-229ENST00000543046 OTOP3Q7RTS5 596 aa5.93□□□□□ -1.46
MDM2-229ENST00000543046 TMEFF1Q8IYR6 380 aa5.93□□□□□ -1.46
MDM2-229ENST00000543046 GSTCDQ8NEC7 633 aa5.93□□□□□ -1.46
MDM2-229ENST00000543046 SLC7A14Q8TBB6 771 aa5.93□□□□□ -1.46
MDM2-229ENST00000543046 PIP4K2CQ8TBX8 421 aa5.93□□□□□ -1.46
MDM2-229ENST00000543046 KCNJ15Q99712 375 aa5.93□□□□□ -1.46
MDM2-229ENST00000543046 KRTAP4-12Q9BQ66 201 aa5.93□□□□□ -1.46
MDM2-229ENST00000543046 KRTAP9-2Q9BYQ4 174 aa5.93□□□□□ -1.46
MDM2-229ENST00000543046 SFMBT1Q9UHJ3 866 aa5.93□□□□□ -1.46
MDM2-229ENST00000543046 KCTD3Q9Y597 815 aa5.93□□□□□ -1.46
MDM2-229ENST00000543046 PCDHB4Q9Y5E5 795 aa5.93□□□□□ -1.46
MDM2-229ENST00000543046 LOC101059915A0A1B0GWI6 518 aaPredicted RBP5.92□□□□□ -1.46
MDM2-229ENST00000543046 ESYT3A0FGR9 886 aa5.92□□□□□ -1.46
MDM2-229ENST00000543046 ARVCFO00192 962 aa5.92□□□□□ -1.46
MDM2-229ENST00000543046 MAFKO60675 156 aa5.92□□□□□ -1.46
MDM2-229ENST00000543046 YBX3P16989 372 aaKnown RBP eCLIP5.92□□□□□ -1.46
MDM2-229ENST00000543046 PI3P19957 117 aa5.92□□□□□ -1.46
MDM2-229ENST00000543046 SPIRE1Q08AE8 756 aa5.92□□□□□ -1.46
MDM2-229ENST00000543046 ETV3LQ6ZN32 361 aa5.92□□□□□ -1.46
MDM2-229ENST00000543046 MIB1Q86YT6 1006 aa5.92□□□□□ -1.46
MDM2-229ENST00000543046 KRTAP19-1Q8IUB9 90 aa5.92□□□□□ -1.46
MDM2-229ENST00000543046 CILP2Q8IUL8 1156 aa5.92□□□□□ -1.46
MDM2-229ENST00000543046 CPA5Q8WXQ8 436 aa5.92□□□□□ -1.46
MDM2-229ENST00000543046 SMOC1Q9H4F8 434 aa5.92□□□□□ -1.46
MDM2-229ENST00000543046 SLC6A20Q9NP91 592 aa5.92□□□□□ -1.46
MDM2-229ENST00000543046 MYOTQ9UBF9 498 aa5.92□□□□□ -1.46
MDM2-229ENST00000543046 FAN1Q9Y2M0 1017 aa5.92□□□□□ -1.46
MDM2-229ENST00000543046 TCRBV5S2A0A599 114 aa5.91□□□□□ -1.46
MDM2-229ENST00000543046 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.91□□□□□ -1.46
MDM2-229ENST00000543046 RFXAPO00287 272 aa5.91□□□□□ -1.46
MDM2-229ENST00000543046 WNT9AO14904 365 aa5.91□□□□□ -1.46
MDM2-229ENST00000543046 PLD2O14939 933 aa5.91□□□□□ -1.46
MDM2-229ENST00000543046 KCNQ2O43526 872 aa5.91□□□□□ -1.46
MDM2-229ENST00000543046 RASGRP1O95267 797 aa5.91□□□□□ -1.46
MDM2-229ENST00000543046 RAPGEF3O95398 923 aa5.91□□□□□ -1.46
MDM2-229ENST00000543046 COL6A2P12110 1019 aa5.91□□□□□ -1.46
MDM2-229ENST00000543046 LIMS1P48059 325 aa5.91□□□□□ -1.46
MDM2-229ENST00000543046 CACNB2Q08289 660 aaPredicted RBP5.91□□□□□ -1.46
MDM2-229ENST00000543046 ZNF385BQ569K4 471 aa5.91□□□□□ -1.46
MDM2-229ENST00000543046 CYP4F22Q6NT55 531 aa5.91□□□□□ -1.46
MDM2-229ENST00000543046 BRAPQ7Z569 592 aa5.91□□□□□ -1.46
MDM2-229ENST00000543046 JAZF1Q86VZ6 243 aa5.91□□□□□ -1.46
MDM2-229ENST00000543046 ARRDC4Q8NCT1 418 aa5.91□□□□□ -1.46
MDM2-229ENST00000543046 PCDH19Q8TAB3 1148 aa5.91□□□□□ -1.46
MDM2-229ENST00000543046 PHOSPHO1Q8TCT1 267 aa5.91□□□□□ -1.46
MDM2-229ENST00000543046 PANK1Q8TE04 598 aa5.91□□□□□ -1.46
MDM2-229ENST00000543046 TOX2Q96NM4 488 aa5.91□□□□□ -1.46
MDM2-229ENST00000543046 EPB41L4AQ9HCS5 686 aaPredicted RBP5.91□□□□□ -1.46
MDM2-229ENST00000543046 MRPL42Q9Y6G3 142 aaKnown RBP5.91□□□□□ -1.46
MDM2-229ENST00000543046 PPP1R12AO14974 1030 aaPredicted RBP5.9□□□□□ -1.46
MDM2-229ENST00000543046 SLC27A2O14975 620 aa5.9□□□□□ -1.46
MDM2-229ENST00000543046 NKRFO15226 690 aaKnown RBP eCLIP5.9□□□□□ -1.46
MDM2-229ENST00000543046 NUAK1O60285 661 aa5.9□□□□□ -1.46
MDM2-229ENST00000543046 ASMTLO95671 621 aa5.9□□□□□ -1.46
MDM2-229ENST00000543046 APPP05067 770 aa5.9□□□□□ -1.46
MDM2-229ENST00000543046 SRGAP2CP0DJJ0 459 aa5.9□□□□□ -1.46
MDM2-229ENST00000543046 FOXO4P98177 505 aa5.9□□□□□ -1.46
MDM2-229ENST00000543046 HABP4Q5JVS0 413 aaKnown RBP5.9□□□□□ -1.46
MDM2-229ENST00000543046 CIAPIN1Q6FI81 312 aa5.9□□□□□ -1.46
MDM2-229ENST00000543046 CNKSR3Q6P9H4 555 aa5.9□□□□□ -1.46
MDM2-229ENST00000543046 FGD2Q7Z6J4 655 aa5.9□□□□□ -1.46
MDM2-229ENST00000543046 B3GNT8Q7Z7M8 397 aa5.9□□□□□ -1.46
MDM2-229ENST00000543046 NOP9Q86U38 636 aaKnown RBP5.9□□□□□ -1.46
MDM2-229ENST00000543046 FAM129CQ86XR2 697 aa5.9□□□□□ -1.46
MDM2-229ENST00000543046 ZC3H7AQ8IWR0 971 aaKnown RBP5.9□□□□□ -1.46
MDM2-229ENST00000543046 FAM126BQ8IXS8 530 aa5.9□□□□□ -1.46
MDM2-229ENST00000543046 SMARCC2Q8TAQ2 1214 aa5.9□□□□□ -1.46
MDM2-229ENST00000543046 UHMK1Q8TAS1 419 aaKnown RBP5.9□□□□□ -1.46
MDM2-229ENST00000543046 FBXW5Q969U6 566 aa5.9□□□□□ -1.46
MDM2-229ENST00000543046 SCLYQ96I15 445 aa5.9□□□□□ -1.46
MDM2-229ENST00000543046 MAGEB10Q96LZ2 347 aaPredicted RBP5.9□□□□□ -1.46
MDM2-229ENST00000543046 CLUHP3Q96NS8 147 aa5.9□□□□□ -1.46
MDM2-229ENST00000543046 YIPF4Q9BSR8 244 aa5.9□□□□□ -1.46
MDM2-229ENST00000543046 TRIM39Q9HCM9 518 aa5.9□□□□□ -1.46
MDM2-229ENST00000543046 ASH2LQ9UBL3 628 aa5.9□□□□□ -1.46
MDM2-229ENST00000543046 KRTAP9-6A0A140TA67 174 aa5.89□□□□□ -1.47
MDM2-229ENST00000543046 C8BP07358 591 aa5.89□□□□□ -1.47
MDM2-229ENST00000543046 PYGMP11217 842 aa5.89□□□□□ -1.47
MDM2-229ENST00000543046 CFPP27918 469 aa5.89□□□□□ -1.47
MDM2-229ENST00000543046 FNDC3BQ53EP0 1204 aaKnown RBP5.89□□□□□ -1.47
MDM2-229ENST00000543046 HOMER1Q86YM7 354 aa5.89□□□□□ -1.47
MDM2-229ENST00000543046 LRRC56Q8IYG6 542 aaPredicted RBP5.89□□□□□ -1.47
MDM2-229ENST00000543046 FAM26EQ8N5C1 309 aa5.89□□□□□ -1.47
MDM2-229ENST00000543046 APPBP2Q92624 585 aa5.89□□□□□ -1.47
MDM2-229ENST00000543046 IRF2BPLQ9H1B7 796 aa5.89□□□□□ -1.47
MDM2-229ENST00000543046 FANCLQ9NW38 375 aa5.89□□□□□ -1.47
MDM2-229ENST00000543046 CYP2C8P10632 490 aa5.88□□□□□ -1.47
MDM2-229ENST00000543046 STAT5AP42229 794 aa5.88□□□□□ -1.47
MDM2-229ENST00000543046 ST5P78524 1137 aa5.88□□□□□ -1.47
MDM2-229ENST00000543046 FAM47CQ5HY64 1035 aa5.88□□□□□ -1.47
MDM2-229ENST00000543046 CD300LDQ6UXZ3 194 aa5.88□□□□□ -1.47
MDM2-229ENST00000543046 C16orf59Q7L2K0 433 aa5.88□□□□□ -1.47
MDM2-229ENST00000543046 ZC3H18Q86VM9 953 aaKnown RBP5.88□□□□□ -1.47
MDM2-229ENST00000543046 C1QL4Q86Z23 238 aa5.88□□□□□ -1.47
MDM2-229ENST00000543046 TRIM48Q8IWZ4 208 aa5.88□□□□□ -1.47
MDM2-229ENST00000543046 RBM12BQ8IXT5 1001 aaKnown RBP5.88□□□□□ -1.47
MDM2-229ENST00000543046 SYNPOQ8N3V7 929 aa5.88□□□□□ -1.47
MDM2-229ENST00000543046 ZSCAN18Q8TBC5 510 aaPredicted RBP5.88□□□□□ -1.47
MDM2-229ENST00000543046 DDX11Q96FC9 970 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms