RNA–Protein interactions for RNA: ENST00000542717.1

CHD4-209, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 204 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-209ENST00000542717 DUSP28Q4G0W2 176 aa3.99□□□□□ -1.77
CHD4-209ENST00000542717 NAALADL2Q58DX5 795 aa3.99□□□□□ -1.77
CHD4-209ENST00000542717 KIAA1755Q5JYT7 1200 aa3.99□□□□□ -1.77
CHD4-209ENST00000542717 ATAT1Q5SQI0 421 aa3.99□□□□□ -1.77
CHD4-209ENST00000542717 SPOUT1Q5T280 376 aaKnown RBP3.99□□□□□ -1.77
CHD4-209ENST00000542717 CCDC102BQ68D86 513 aa3.99□□□□□ -1.77
CHD4-209ENST00000542717 NAA16Q6N069 864 aaPredicted RBP3.99□□□□□ -1.77
CHD4-209ENST00000542717 TATDN1Q6P1N9 297 aa3.99□□□□□ -1.77
CHD4-209ENST00000542717 XRRA1Q6P2D8 792 aa3.99□□□□□ -1.77
CHD4-209ENST00000542717 TSSK4Q6SA08 328 aa3.99□□□□□ -1.77
CHD4-209ENST00000542717 TBC1D9Q6ZT07 1266 aa3.99□□□□□ -1.77
CHD4-209ENST00000542717 ARHGAP30Q7Z6I6 1101 aaPredicted RBP3.99□□□□□ -1.77
CHD4-209ENST00000542717 TTC6Q86TZ1 520 aa3.99□□□□□ -1.77
CHD4-209ENST00000542717 MAML2Q8IZL2 1156 aaPredicted RBP3.99□□□□□ -1.77
CHD4-209ENST00000542717 C7orf31Q8N865 590 aa3.99□□□□□ -1.77
CHD4-209ENST00000542717 ZBTB44Q8NCP5 570 aa3.99□□□□□ -1.77
CHD4-209ENST00000542717 DHX38Q92620 1227 aaKnown RBP3.99□□□□□ -1.77
CHD4-209ENST00000542717 CASP10Q92851 521 aa3.99□□□□□ -1.77
CHD4-209ENST00000542717 SUCLG2Q96I99 432 aa3.99□□□□□ -1.77
CHD4-209ENST00000542717 FGD4Q96M96 766 aa3.99□□□□□ -1.77
CHD4-209ENST00000542717 MYL10Q9BUA6 226 aa3.99□□□□□ -1.77
CHD4-209ENST00000542717 TMEM121BQ9BXQ6 578 aaPredicted RBP3.99□□□□□ -1.77
CHD4-209ENST00000542717 WDR11Q9BZH6 1224 aa3.99□□□□□ -1.77
CHD4-209ENST00000542717 FOXQ1Q9C009 403 aa3.99□□□□□ -1.77
CHD4-209ENST00000542717 ADAM7Q9H2U9 754 aa3.99□□□□□ -1.77
CHD4-209ENST00000542717 BICC1Q9H694 974 aaKnown RBP3.99□□□□□ -1.77
CHD4-209ENST00000542717 CLMPQ9H6B4 373 aa3.99□□□□□ -1.77
CHD4-209ENST00000542717 VCPKMTQ9H867 229 aa3.99□□□□□ -1.77
CHD4-209ENST00000542717 CEP126Q9P2H0 1117 aa3.99□□□□□ -1.77
CHD4-209ENST00000542717 FBXO40Q9UH90 709 aa3.99□□□□□ -1.77
CHD4-209ENST00000542717 PPP1R9AQ9ULJ8 1098 aa3.99□□□□□ -1.77
CHD4-209ENST00000542717 TRIM35Q9UPQ4 493 aa3.99□□□□□ -1.77
CHD4-209ENST00000542717 ASXL3Q9C0F0 2248 aa3.99□□□□□ -1.77
CHD4-209ENST00000542717 CEP295Q9C0D2 2601 aa3.99□□□□□ -1.77
CHD4-209ENST00000542717 RALGAPA1Q6GYQ0 2036 aa3.99□□□□□ -1.77
CHD4-209ENST00000542717 TEP1Q99973 2627 aaKnown RBP3.98□□□□□ -1.77
CHD4-209ENST00000542717 SIPA1L1O43166 1804 aa3.98□□□□□ -1.77
CHD4-209ENST00000542717 LOC101059915A0A1B0GWI6 518 aaPredicted RBP3.98□□□□□ -1.77
CHD4-209ENST00000542717 EYA2O00167 538 aa3.98□□□□□ -1.77
CHD4-209ENST00000542717 LILRB5O75023 590 aa3.98□□□□□ -1.77
CHD4-209ENST00000542717 ZBED4O75132 1171 aa3.98□□□□□ -1.77
CHD4-209ENST00000542717 LRRN2O75325 713 aa3.98□□□□□ -1.77
CHD4-209ENST00000542717 EOMESO95936 686 aa3.98□□□□□ -1.77
CHD4-209ENST00000542717 ADORA1P30542 326 aa3.98□□□□□ -1.77
CHD4-209ENST00000542717 GUCY1A2P33402 732 aa3.98□□□□□ -1.77
CHD4-209ENST00000542717 CA8P35219 290 aa3.98□□□□□ -1.77
CHD4-209ENST00000542717 LIMK1P53667 647 aa3.98□□□□□ -1.77
CHD4-209ENST00000542717 KCNC4Q03721 635 aa3.98□□□□□ -1.77
CHD4-209ENST00000542717 ICA1Q05084 483 aa3.98□□□□□ -1.77
CHD4-209ENST00000542717 PDE4BQ07343 736 aa3.98□□□□□ -1.77
CHD4-209ENST00000542717 RBL2Q08999 1139 aa3.98□□□□□ -1.77
CHD4-209ENST00000542717 SIM2Q14190 667 aaPredicted RBP3.98□□□□□ -1.77
CHD4-209ENST00000542717 MBTPS1Q14703 1052 aa3.98□□□□□ -1.77
CHD4-209ENST00000542717 UBXN2BQ14CS0 331 aa3.98□□□□□ -1.77
CHD4-209ENST00000542717 PAN2Q504Q3 1202 aaKnown RBP3.98□□□□□ -1.77
CHD4-209ENST00000542717 PLEKHG4Q58EX7 1191 aa3.98□□□□□ -1.77
CHD4-209ENST00000542717 RARS2Q5T160 578 aaKnown RBP3.98□□□□□ -1.77
CHD4-209ENST00000542717 BEND3Q5T5X7 828 aa3.98□□□□□ -1.77
CHD4-209ENST00000542717 STPG1Q5TH74 334 aa3.98□□□□□ -1.77
CHD4-209ENST00000542717 PLPP4Q5VZY2 271 aa3.98□□□□□ -1.77
CHD4-209ENST00000542717 PHLDB3Q6NSJ2 640 aa3.98□□□□□ -1.77
CHD4-209ENST00000542717 KIAA1211LQ6NV74 962 aa3.98□□□□□ -1.77
CHD4-209ENST00000542717 TAPT1Q6NXT6 567 aa3.98□□□□□ -1.77
CHD4-209ENST00000542717 DCLRE1AQ6PJP8 1040 aa3.98□□□□□ -1.77
CHD4-209ENST00000542717 TMEM184AQ6ZMB5 413 aa3.98□□□□□ -1.77
CHD4-209ENST00000542717 OTOP3Q7RTS5 596 aa3.98□□□□□ -1.77
CHD4-209ENST00000542717 ATG9AQ7Z3C6 839 aa3.98□□□□□ -1.77
CHD4-209ENST00000542717 PROSER1Q86XN7 944 aa3.98□□□□□ -1.77
CHD4-209ENST00000542717 DHX37Q8IY37 1157 aaKnown RBP3.98□□□□□ -1.77
CHD4-209ENST00000542717 CELF5Q8N6W0 485 aaKnown RBP3.98□□□□□ -1.77
CHD4-209ENST00000542717 TSPYL6Q8N831 410 aa3.98□□□□□ -1.77
CHD4-209ENST00000542717 TMEM87AQ8NBN3 555 aa3.98□□□□□ -1.77
CHD4-209ENST00000542717 CHST13Q8NET6 341 aa3.98□□□□□ -1.77
CHD4-209ENST00000542717 SLC39A7Q92504 469 aa3.98□□□□□ -1.77
CHD4-209ENST00000542717 MAP4K1Q92918 833 aa3.98□□□□□ -1.77
CHD4-209ENST00000542717 CLP1Q92989 425 aaKnown RBP3.98□□□□□ -1.77
CHD4-209ENST00000542717 GPR20Q99678 358 aa3.98□□□□□ -1.77
CHD4-209ENST00000542717 SLF1Q9BQI6 1058 aa3.98□□□□□ -1.77
CHD4-209ENST00000542717 ALG1Q9BT22 464 aa3.98□□□□□ -1.77
CHD4-209ENST00000542717 KCNK12Q9HB15 430 aa3.98□□□□□ -1.77
CHD4-209ENST00000542717 RAVER2Q9HCJ3 691 aaKnown RBP3.98□□□□□ -1.77
CHD4-209ENST00000542717 VTA1Q9NP79 307 aa3.98□□□□□ -1.77
CHD4-209ENST00000542717 ARHGEF3Q9NR81 526 aa3.98□□□□□ -1.77
CHD4-209ENST00000542717 RXFP3Q9NSD7 469 aa3.98□□□□□ -1.77
CHD4-209ENST00000542717 KCNK4Q9NYG8 393 aa3.98□□□□□ -1.77
CHD4-209ENST00000542717 DLGAP2Q9P1A6 1054 aa3.98□□□□□ -1.77
CHD4-209ENST00000542717 ADAMTS5Q9UNA0 930 aa3.98□□□□□ -1.77
CHD4-209ENST00000542717 USTQ9Y2C2 406 aa3.98□□□□□ -1.77
CHD4-209ENST00000542717 MRPL42Q9Y6G3 142 aaKnown RBP3.98□□□□□ -1.77
CHD4-209ENST00000542717 DDX49Q9Y6V7 483 aaKnown RBP3.98□□□□□ -1.77
CHD4-209ENST00000542717 LOC400499M0QZD8 3231 aa3.97□□□□□ -1.77
CHD4-209ENST00000542717 HECTD1Q9ULT8 2610 aa3.97□□□□□ -1.77
CHD4-209ENST00000542717 SCN10AQ9Y5Y9 1956 aa3.97□□□□□ -1.77
CHD4-209ENST00000542717 ENO4A6NNW6 628 aa3.97□□□□□ -1.77
CHD4-209ENST00000542717 GIPC1O14908 333 aa3.97□□□□□ -1.77
CHD4-209ENST00000542717 POLR3DP05423 398 aaPredicted RBP3.97□□□□□ -1.77
CHD4-209ENST00000542717 CTSHP09668 335 aa3.97□□□□□ -1.77
CHD4-209ENST00000542717 LINC00271P0C7V0 271 aa3.97□□□□□ -1.77
CHD4-209ENST00000542717 HOXD8P13378 290 aaPredicted RBP3.97□□□□□ -1.77
CHD4-209ENST00000542717 GLULP15104 373 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms