RNA–Protein interactions for RNA: ENST00000540574.5

PHC1-208, Transcript of polyhomeotic homolog 1, humanhuman

TSL 1 (best)

Gene PHC1, Length 3,869 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC1-208ENST00000540574 ADAM21Q9UKJ8 722 aa10.9□□□□□ -0.66
PHC1-208ENST00000540574 PCDHA13Q9Y5I0 950 aa10.9□□□□□ -0.66
PHC1-208ENST00000540574 GOLGA6BA6NDN3 693 aa10.9□□□□□ -0.66
PHC1-208ENST00000540574 LAD1O00515 517 aa10.9□□□□□ -0.66
PHC1-208ENST00000540574 HARSP12081 509 aaKnown RBP10.9□□□□□ -0.66
PHC1-208ENST00000540574 ACTN1P12814 892 aa10.9□□□□□ -0.66
PHC1-208ENST00000540574 XRCC5P13010 732 aaKnown RBP10.9□□□□□ -0.66
PHC1-208ENST00000540574 GYS1P13807 737 aa10.9□□□□□ -0.66
PHC1-208ENST00000540574 VAV2P52735 878 aa10.9□□□□□ -0.66
PHC1-208ENST00000540574 HNRNPH2P55795 449 aaKnown RBP10.9□□□□□ -0.66
PHC1-208ENST00000540574 UHMK1Q8TAS1 419 aaKnown RBP10.9□□□□□ -0.66
PHC1-208ENST00000540574 MS4A14Q96JA4 679 aa10.9□□□□□ -0.66
PHC1-208ENST00000540574 EXOC3O60645 756 aa10.9□□□□□ -0.66
PHC1-208ENST00000540574 GAS7O60861 476 aa10.9□□□□□ -0.66
PHC1-208ENST00000540574 EPB41P11171 864 aaKnown RBP10.9□□□□□ -0.66
PHC1-208ENST00000540574 ALDH1B1P30837 517 aa10.9□□□□□ -0.66
PHC1-208ENST00000540574 GUCY2DQ02846 1103 aa10.9□□□□□ -0.66
PHC1-208ENST00000540574 COASYQ13057 564 aa10.9□□□□□ -0.66
PHC1-208ENST00000540574 SLC10A5Q5PT55 438 aa10.9□□□□□ -0.66
PHC1-208ENST00000540574 C16orf86Q6ZW13 317 aa10.9□□□□□ -0.66
PHC1-208ENST00000540574 AMNQ9BXJ7 453 aa10.9□□□□□ -0.66
PHC1-208ENST00000540574 CCSER1Q9C0I3 900 aa10.9□□□□□ -0.66
PHC1-208ENST00000540574 ZMYND12Q9H0C1 365 aa10.9□□□□□ -0.66
PHC1-208ENST00000540574 NT5C3AQ9H0P0 336 aa10.9□□□□□ -0.66
PHC1-208ENST00000540574 JMJD4Q9H9V9 463 aa10.9□□□□□ -0.66
PHC1-208ENST00000540574 COL4A3BPQ9Y5P4 624 aa10.9□□□□□ -0.66
PHC1-208ENST00000540574 FHOD1Q9Y613 1164 aa10.9□□□□□ -0.66
PHC1-208ENST00000540574 CCDC169A6NNP5 214 aa10.89□□□□□ -0.67
PHC1-208ENST00000540574 F5H6K3 240 aa10.89□□□□□ -0.67
PHC1-208ENST00000540574 ZBTB5O15062 677 aa10.89□□□□□ -0.67
PHC1-208ENST00000540574 MCM3P25205 808 aa10.89□□□□□ -0.67
PHC1-208ENST00000540574 KLRC3Q07444 240 aa10.89□□□□□ -0.67
PHC1-208ENST00000540574 TBX2Q13207 712 aaPredicted RBP10.89□□□□□ -0.67
PHC1-208ENST00000540574 E2F4Q16254 413 aa10.89□□□□□ -0.67
PHC1-208ENST00000540574 NAALADL2Q58DX5 795 aa10.89□□□□□ -0.67
PHC1-208ENST00000540574 GPATCH4Q5T3I0 446 aaKnown RBP10.89□□□□□ -0.67
PHC1-208ENST00000540574 RNF187Q5TA31 235 aaPredicted RBP10.89□□□□□ -0.67
PHC1-208ENST00000540574 CDC42EP5Q6NZY7 148 aa10.89□□□□□ -0.67
PHC1-208ENST00000540574 KRT27Q7Z3Y8 459 aa10.89□□□□□ -0.67
PHC1-208ENST00000540574 KCNK18Q7Z418 384 aa10.89□□□□□ -0.67
PHC1-208ENST00000540574 GIMAP8Q8ND71 665 aaPredicted RBP10.89□□□□□ -0.67
PHC1-208ENST00000540574 TRIM58Q8NG06 486 aa10.89□□□□□ -0.67
PHC1-208ENST00000540574 KRT12Q99456 494 aa10.89□□□□□ -0.67
PHC1-208ENST00000540574 SASH3O75995 380 aa10.89□□□□□ -0.67
PHC1-208ENST00000540574 ALAS1P13196 640 aa10.89□□□□□ -0.67
PHC1-208ENST00000540574 NPY5RQ15761 445 aa10.89□□□□□ -0.67
PHC1-208ENST00000540574 UNC13DQ70J99 1090 aa10.89□□□□□ -0.67
PHC1-208ENST00000540574 TMEM139Q8IV31 216 aa10.89□□□□□ -0.67
PHC1-208ENST00000540574 BICD1Q96G01 975 aa10.89□□□□□ -0.67
PHC1-208ENST00000540574 RHOBTB3O94955 611 aa10.89□□□□□ -0.67
PHC1-208ENST00000540574 TNIP1Q15025 636 aa10.89□□□□□ -0.67
PHC1-208ENST00000540574 NT5DC1Q5TFE4 455 aa10.89□□□□□ -0.67
PHC1-208ENST00000540574 BARGINQ6ZT62 677 aa10.89□□□□□ -0.67
PHC1-208ENST00000540574 SFR1Q86XK3 245 aa10.89□□□□□ -0.67
PHC1-208ENST00000540574 CCDC127Q96BQ5 260 aa10.89□□□□□ -0.67
PHC1-208ENST00000540574 ZBTB12Q9Y330 459 aaPredicted RBP10.89□□□□□ -0.67
PHC1-208ENST00000540574 GJA3Q9Y6H8 435 aa10.89□□□□□ -0.67
PHC1-208ENST00000540574 GPR75-ASB3A0A0A6YYF3 556 aa10.88□□□□□ -0.67
PHC1-208ENST00000540574 ARHGEF35A5YM69 484 aa10.88□□□□□ -0.67
PHC1-208ENST00000540574 GOLGA6CA6NDK9 693 aa10.88□□□□□ -0.67
PHC1-208ENST00000540574 GOLGA6DP0CG33 693 aa10.88□□□□□ -0.67
PHC1-208ENST00000540574 H2AFXP16104 143 aaPredicted RBP10.88□□□□□ -0.67
PHC1-208ENST00000540574 DLGAP5Q15398 846 aa10.88□□□□□ -0.67
PHC1-208ENST00000540574 VPS72Q15906 364 aa10.88□□□□□ -0.67
PHC1-208ENST00000540574 CCDC25Q86WR0 208 aa10.88□□□□□ -0.67
PHC1-208ENST00000540574 AFAP1L1Q8TED9 768 aa10.88□□□□□ -0.67
PHC1-208ENST00000540574 RAD54LQ92698 747 aa10.88□□□□□ -0.67
PHC1-208ENST00000540574 SPZ1Q9BXG8 430 aa10.88□□□□□ -0.67
PHC1-208ENST00000540574 GOLGA6AQ9NYA3 693 aa10.88□□□□□ -0.67
PHC1-208ENST00000540574 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.88□□□□□ -0.67
PHC1-208ENST00000540574 MYO1AQ9UBC5 1043 aa10.88□□□□□ -0.67
PHC1-208ENST00000540574 GFPT2O94808 682 aa10.88□□□□□ -0.67
PHC1-208ENST00000540574 TBC1D8O95759 1140 aa10.88□□□□□ -0.67
PHC1-208ENST00000540574 ZNF543Q08ER8 600 aa10.88□□□□□ -0.67
PHC1-208ENST00000540574 CFAP58Q5T655 872 aa10.88□□□□□ -0.67
PHC1-208ENST00000540574 PHLDB2Q86SQ0 1253 aa10.88□□□□□ -0.67
PHC1-208ENST00000540574 UBLCP1Q8WVY7 318 aaPredicted RBP10.88□□□□□ -0.67
PHC1-208ENST00000540574 AP1M1Q9BXS5 423 aa10.88□□□□□ -0.67
PHC1-208ENST00000540574 TSGA10Q9BZW7 698 aa10.88□□□□□ -0.67
PHC1-208ENST00000540574 COA1Q9GZY4 146 aa10.88□□□□□ -0.67
PHC1-208ENST00000540574 DPH5Q9H2P9 285 aa10.88□□□□□ -0.67
PHC1-208ENST00000540574 TRPC5Q9UL62 973 aaPredicted RBP10.88□□□□□ -0.67
PHC1-208ENST00000540574 CNTNAP4Q9C0A0 1308 aa10.88□□□□□ -0.67
PHC1-208ENST00000540574 ARHGAP4P98171 946 aa10.88□□□□□ -0.67
PHC1-208ENST00000540574 MKRN4PQ13434 485 aaPredicted RBP10.88□□□□□ -0.67
PHC1-208ENST00000540574 EXOC3L4Q17RC7 722 aa10.88□□□□□ -0.67
PHC1-208ENST00000540574 TTI2Q6NXR4 508 aa10.88□□□□□ -0.67
PHC1-208ENST00000540574 SH3RF1Q7Z6J0 888 aa10.88□□□□□ -0.67
PHC1-208ENST00000540574 SEMA6BQ9H3T3 888 aa10.88□□□□□ -0.67
PHC1-208ENST00000540574 CUEDC2Q9H467 287 aa10.88□□□□□ -0.67
PHC1-208ENST00000540574 CAPN11Q9UMQ6 739 aa10.88□□□□□ -0.67
PHC1-208ENST00000540574 RABGAP1Q9Y3P9 1069 aa10.88□□□□□ -0.67
PHC1-208ENST00000540574 FAM237AA0A1B0GTK4 181 aa10.87□□□□□ -0.67
PHC1-208ENST00000540574 VGLL3A8MV65 326 aa10.87□□□□□ -0.67
PHC1-208ENST00000540574 RNF40O75150 1001 aa10.87□□□□□ -0.67
PHC1-208ENST00000540574 BMP3P12645 472 aa10.87□□□□□ -0.67
PHC1-208ENST00000540574 KCNJ6P48051 423 aa10.87□□□□□ -0.67
PHC1-208ENST00000540574 GRB10Q13322 594 aa10.87□□□□□ -0.67
PHC1-208ENST00000540574 ODR4Q5SWX8 454 aa10.87□□□□□ -0.67
PHC1-208ENST00000540574 LRCH2Q5VUJ6 765 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms