RNA–Protein interactions for RNA: ENST00000540352.5

MDM2-226, Transcript of MDM2 proto-oncogene, humanhuman

TSL 1 (best)

Gene MDM2, Length 1,315 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-226ENST00000540352 ZSCAN26Q16670 478 aa5.58□□□□□ -1.52
MDM2-226ENST00000540352 SLC10A6Q3KNW5 377 aa5.58□□□□□ -1.52
MDM2-226ENST00000540352 CCDC144BQ3MJ40 725 aa5.58□□□□□ -1.52
MDM2-226ENST00000540352 MAP9Q49MG5 647 aa5.58□□□□□ -1.52
MDM2-226ENST00000540352 TIGD5Q53EQ6 642 aa5.58□□□□□ -1.52
MDM2-226ENST00000540352 ZNF227Q86WZ6 799 aa5.58□□□□□ -1.52
MDM2-226ENST00000540352 TRIM59Q8IWR1 403 aa5.58□□□□□ -1.52
MDM2-226ENST00000540352 SIRT2Q8IXJ6 389 aa5.58□□□□□ -1.52
MDM2-226ENST00000540352 EXOC8Q8IYI6 725 aa5.58□□□□□ -1.52
MDM2-226ENST00000540352 ZNF397Q8NF99 534 aaPredicted RBP5.58□□□□□ -1.52
MDM2-226ENST00000540352 BTN2A2Q8WVV5 523 aa5.58□□□□□ -1.52
MDM2-226ENST00000540352 TNPO1Q92973 898 aaKnown RBP5.58□□□□□ -1.52
MDM2-226ENST00000540352 RNF32Q9H0A6 362 aa5.58□□□□□ -1.52
MDM2-226ENST00000540352 EPN3Q9H201 632 aa5.58□□□□□ -1.52
MDM2-226ENST00000540352 ZKSCAN7Q9P0L1 754 aaPredicted RBP5.58□□□□□ -1.52
MDM2-226ENST00000540352 POLKQ9UBT6 870 aa5.58□□□□□ -1.52
MDM2-226ENST00000540352 RNF114Q9Y508 228 aa5.58□□□□□ -1.52
MDM2-226ENST00000540352 NUB1Q9Y5A7 615 aa5.58□□□□□ -1.52
MDM2-226ENST00000540352 V9GYY5 206 aaPredicted RBP5.58□□□□□ -1.52
MDM2-226ENST00000540352 PLEKHG2Q9H7P9 1386 aa5.58□□□□□ -1.52
MDM2-226ENST00000540352 KDM5BQ9UGL1 1544 aa5.58□□□□□ -1.52
MDM2-226ENST00000540352 C2orf71A6NGG8 1288 aa5.57□□□□□ -1.52
MDM2-226ENST00000540352 AURKAO14965 403 aa5.57□□□□□ -1.52
MDM2-226ENST00000540352 FGF10O15520 208 aaPredicted RBP5.57□□□□□ -1.52
MDM2-226ENST00000540352 CCP110O43303 1012 aa5.57□□□□□ -1.52
MDM2-226ENST00000540352 TBC1D8O95759 1140 aa5.57□□□□□ -1.52
MDM2-226ENST00000540352 ITGAVP06756 1048 aa5.57□□□□□ -1.52
MDM2-226ENST00000540352 KCNJ6P48051 423 aa5.57□□□□□ -1.52
MDM2-226ENST00000540352 GALK1P51570 392 aa5.57□□□□□ -1.52
MDM2-226ENST00000540352 SCRN1Q12765 414 aa5.57□□□□□ -1.52
MDM2-226ENST00000540352 GPS2Q13227 327 aa5.57□□□□□ -1.52
MDM2-226ENST00000540352 LAPTM5Q13571 262 aa5.57□□□□□ -1.52
MDM2-226ENST00000540352 RAB3GAP1Q15042 981 aa5.57□□□□□ -1.52
MDM2-226ENST00000540352 NR0B2Q15466 257 aa5.57□□□□□ -1.52
MDM2-226ENST00000540352 DNAJC21Q5F1R6 531 aaKnown RBP5.57□□□□□ -1.52
MDM2-226ENST00000540352 HLA-DQA1Q5Y7H0 255 aa5.57□□□□□ -1.52
MDM2-226ENST00000540352 EEF1DP3Q658K8 133 aa5.57□□□□□ -1.52
MDM2-226ENST00000540352 GTF2IRD2BQ6EKJ0 949 aa5.57□□□□□ -1.52
MDM2-226ENST00000540352 GALNT18Q6P9A2 607 aa5.57□□□□□ -1.52
MDM2-226ENST00000540352 GTF2IRD2Q86UP8 949 aa5.57□□□□□ -1.52
MDM2-226ENST00000540352 SMC5Q8IY18 1101 aa5.57□□□□□ -1.52
MDM2-226ENST00000540352 IQUBQ8NA54 791 aa5.57□□□□□ -1.52
MDM2-226ENST00000540352 STAG1Q8WVM7 1258 aa5.57□□□□□ -1.52
MDM2-226ENST00000540352 PPM1EQ8WY54 764 aa5.57□□□□□ -1.52
MDM2-226ENST00000540352 KIF1BPQ96EK5 621 aa5.57□□□□□ -1.52
MDM2-226ENST00000540352 PTCHD1Q96NR3 888 aa5.57□□□□□ -1.52
MDM2-226ENST00000540352 MCMBPQ9BTE3 642 aa5.57□□□□□ -1.52
MDM2-226ENST00000540352 ZSWIM4Q9H7M6 989 aa5.57□□□□□ -1.52
MDM2-226ENST00000540352 SMC3Q9UQE7 1217 aa5.57□□□□□ -1.52
MDM2-226ENST00000540352 A0A1W2PQJ5 194 aa5.56□□□□□ -1.52
MDM2-226ENST00000540352 LRRC10BA6NIK2 292 aa5.56□□□□□ -1.52
MDM2-226ENST00000540352 WTIPA6NIX2 430 aaPredicted RBP5.56□□□□□ -1.52
MDM2-226ENST00000540352 FADS2P1A8MWK0 482 aa5.56□□□□□ -1.52
MDM2-226ENST00000540352 TBX1O43435 398 aa5.56□□□□□ -1.52
MDM2-226ENST00000540352 SMARCA5O60264 1052 aaPredicted RBP5.56□□□□□ -1.52
MDM2-226ENST00000540352 PSPNO60542 156 aa5.56□□□□□ -1.52
MDM2-226ENST00000540352 CPP00450 1065 aa5.56□□□□□ -1.52
MDM2-226ENST00000540352 SNRPB2P08579 225 aaKnown RBP5.56□□□□□ -1.52
MDM2-226ENST00000540352 PDE6BP35913 854 aa5.56□□□□□ -1.52
MDM2-226ENST00000540352 USP8P40818 1118 aa5.56□□□□□ -1.52
MDM2-226ENST00000540352 CD151P48509 253 aa5.56□□□□□ -1.52
MDM2-226ENST00000540352 TPM4P67936 248 aa5.56□□□□□ -1.52
MDM2-226ENST00000540352 NUCB2P80303 420 aa5.56□□□□□ -1.52
MDM2-226ENST00000540352 NCBP1Q09161 790 aaKnown RBP5.56□□□□□ -1.52
MDM2-226ENST00000540352 PPP2R5AQ15172 486 aa5.56□□□□□ -1.52
MDM2-226ENST00000540352 HSF5Q4G112 596 aaPredicted RBP5.56□□□□□ -1.52
MDM2-226ENST00000540352 CARMIL2Q6F5E8 1435 aa5.56□□□□□ -1.52
MDM2-226ENST00000540352 RCSD1Q6JBY9 416 aa5.56□□□□□ -1.52
MDM2-226ENST00000540352 MMS22LQ6ZRQ5 1243 aa5.56□□□□□ -1.52
MDM2-226ENST00000540352 SRLQ86TD4 932 aa5.56□□□□□ -1.52
MDM2-226ENST00000540352 FMNL3Q8IVF7 1028 aa5.56□□□□□ -1.52
MDM2-226ENST00000540352 HSCBQ8IWL3 235 aa5.56□□□□□ -1.52
MDM2-226ENST00000540352 NUP43Q8NFH3 380 aa5.56□□□□□ -1.52
MDM2-226ENST00000540352 LIN37Q96GY3 246 aaPredicted RBP5.56□□□□□ -1.52
MDM2-226ENST00000540352 SLC6A17Q9H1V8 727 aa5.56□□□□□ -1.52
MDM2-226ENST00000540352 ETAA1Q9NY74 926 aa5.56□□□□□ -1.52
MDM2-226ENST00000540352 SIRPGQ9P1W8 387 aa5.56□□□□□ -1.52
MDM2-226ENST00000540352 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP5.56□□□□□ -1.52
MDM2-226ENST00000540352 RPS6KL1Q9Y6S9 549 aa5.56□□□□□ -1.52
MDM2-226ENST00000540352 PLEKHH1Q9ULM0 1364 aa5.56□□□□□ -1.52
MDM2-226ENST00000540352 NESP48681 1621 aa5.56□□□□□ -1.52
MDM2-226ENST00000540352 POLA1P09884 1462 aaPredicted RBP5.56□□□□□ -1.52
MDM2-226ENST00000540352 A0A1W2PQ45 241 aaPredicted RBP5.55□□□□□ -1.52
MDM2-226ENST00000540352 A0A1W2PQY0 241 aa5.55□□□□□ -1.52
MDM2-226ENST00000540352 IQCA1LA6NCM1 817 aa5.55□□□□□ -1.52
MDM2-226ENST00000540352 SMTNL1A8MU46 457 aa5.55□□□□□ -1.52
MDM2-226ENST00000540352 IVLP07476 585 aa5.55□□□□□ -1.52
MDM2-226ENST00000540352 TPM1P09493 284 aa5.55□□□□□ -1.52
MDM2-226ENST00000540352 PAX7P23759 505 aa5.55□□□□□ -1.52
MDM2-226ENST00000540352 ARL4AP40617 200 aa5.55□□□□□ -1.52
MDM2-226ENST00000540352 ADCY2Q08462 1091 aa5.55□□□□□ -1.52
MDM2-226ENST00000540352 TRAF1Q13077 416 aa5.55□□□□□ -1.52
MDM2-226ENST00000540352 MYBPC2Q14324 1141 aa5.55□□□□□ -1.52
MDM2-226ENST00000540352 CDC37Q16543 378 aaPredicted RBP5.55□□□□□ -1.52
MDM2-226ENST00000540352 MLANAQ16655 118 aa5.55□□□□□ -1.52
MDM2-226ENST00000540352 MTERF2Q49AM1 385 aa5.55□□□□□ -1.52
MDM2-226ENST00000540352 C1QTNF12Q5T7M4 302 aa5.55□□□□□ -1.52
MDM2-226ENST00000540352 CAVIN1Q6NZI2 390 aaKnown RBP5.55□□□□□ -1.52
MDM2-226ENST00000540352 SYT10Q6XYQ8 523 aa5.55□□□□□ -1.52
MDM2-226ENST00000540352 SLCO6A1Q86UG4 719 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms