RNA–Protein interactions for RNA: ENST00000540317.5

CYB561A3-215, Transcript of cytochrome b561 family member A3, humanhuman

TSL 3

Gene CYB561A3, Length 1,557 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYB561A3-215ENST00000540317 UBE2Q1Q7Z7E8 422 aa13.49□□□□□ -0.25
CYB561A3-215ENST00000540317 AOPEPQ8N6M6 819 aa13.49□□□□□ -0.25
CYB561A3-215ENST00000540317 NPLOC4Q8TAT6 608 aa13.49□□□□□ -0.25
CYB561A3-215ENST00000540317 SYMPKQ92797 1274 aaKnown RBP13.49□□□□□ -0.25
CYB561A3-215ENST00000540317 SMARCE1Q969G3 411 aa13.49□□□□□ -0.25
CYB561A3-215ENST00000540317 KIFC2Q96AC6 838 aa13.49□□□□□ -0.25
CYB561A3-215ENST00000540317 PAWRQ96IZ0 340 aaKnown RBP13.49□□□□□ -0.25
CYB561A3-215ENST00000540317 PIGSQ96S52 555 aa13.49□□□□□ -0.25
CYB561A3-215ENST00000540317 FLRT1Q9NZU1 646 aa13.49□□□□□ -0.25
CYB561A3-215ENST00000540317 SERTAD1Q9UHV2 236 aa13.49□□□□□ -0.25
CYB561A3-215ENST00000540317 GREB1LQ9C091 1923 aaPredicted RBP13.48□□□□□ -0.25
CYB561A3-215ENST00000540317 VWA3AA6NCI4 1184 aa13.48□□□□□ -0.25
CYB561A3-215ENST00000540317 CYP2C19P33261 490 aa13.48□□□□□ -0.25
CYB561A3-215ENST00000540317 SARSP49591 514 aaKnown RBP13.48□□□□□ -0.25
CYB561A3-215ENST00000540317 PNOCQ13519 176 aa13.48□□□□□ -0.25
CYB561A3-215ENST00000540317 SLFN13Q68D06 897 aa13.48□□□□□ -0.25
CYB561A3-215ENST00000540317 NECAB2Q7Z6G3 386 aa13.48□□□□□ -0.25
CYB561A3-215ENST00000540317 HOMER1Q86YM7 354 aa13.48□□□□□ -0.25
CYB561A3-215ENST00000540317 C4orf32Q8N8J7 132 aa13.48□□□□□ -0.25
CYB561A3-215ENST00000540317 IQUBQ8NA54 791 aa13.48□□□□□ -0.25
CYB561A3-215ENST00000540317 MLKLQ8NB16 471 aa13.48□□□□□ -0.25
CYB561A3-215ENST00000540317 ERCC4Q92889 916 aaPredicted RBP13.48□□□□□ -0.25
CYB561A3-215ENST00000540317 UBA5Q9GZZ9 404 aa13.48□□□□□ -0.25
CYB561A3-215ENST00000540317 VAT1LQ9HCJ6 419 aa13.48□□□□□ -0.25
CYB561A3-215ENST00000540317 RTN4Q9NQC3 1192 aaKnown RBP13.48□□□□□ -0.25
CYB561A3-215ENST00000540317 PCDHA5Q9Y5H7 936 aa13.48□□□□□ -0.25
CYB561A3-215ENST00000540317 ZBED4O75132 1171 aa13.47□□□□□ -0.25
CYB561A3-215ENST00000540317 BMP3P12645 472 aa13.47□□□□□ -0.25
CYB561A3-215ENST00000540317 ADCY7P51828 1080 aa13.47□□□□□ -0.25
CYB561A3-215ENST00000540317 IKQ13123 557 aaPredicted RBP13.47□□□□□ -0.25
CYB561A3-215ENST00000540317 DHX8Q14562 1220 aaKnown RBP13.47□□□□□ -0.25
CYB561A3-215ENST00000540317 DTHD1Q6ZMT9 781 aa13.47□□□□□ -0.25
CYB561A3-215ENST00000540317 RIOX2Q8IUF8 465 aa13.47□□□□□ -0.25
CYB561A3-215ENST00000540317 ABRAQ8N0Z2 381 aa13.47□□□□□ -0.25
CYB561A3-215ENST00000540317 CPXCR1Q8N123 301 aa13.47□□□□□ -0.25
CYB561A3-215ENST00000540317 REXO1Q8N1G1 1221 aaKnown RBP13.47□□□□□ -0.25
CYB561A3-215ENST00000540317 GMCL1P1Q8NEA9 526 aa13.47□□□□□ -0.25
CYB561A3-215ENST00000540317 SPATA20Q8TB22 786 aa13.47□□□□□ -0.25
CYB561A3-215ENST00000540317 MTMR8Q96EF0 704 aa13.47□□□□□ -0.25
CYB561A3-215ENST00000540317 FEM1BQ9UK73 627 aa13.47□□□□□ -0.25
CYB561A3-215ENST00000540317 FRMPD2Q68DX3 1309 aaPredicted RBP13.47□□□□□ -0.25
CYB561A3-215ENST00000540317 PLXNB2O15031 1838 aa13.47□□□□□ -0.25
CYB561A3-215ENST00000540317 TMEM232C9JQI7 657 aa13.46□□□□□ -0.25
CYB561A3-215ENST00000540317 H0YGN5 161 aa13.46□□□□□ -0.25
CYB561A3-215ENST00000540317 BIN1O00499 593 aa13.46□□□□□ -0.25
CYB561A3-215ENST00000540317 ZBTB5O15062 677 aa13.46□□□□□ -0.25
CYB561A3-215ENST00000540317 COBLO75128 1261 aa13.46□□□□□ -0.25
CYB561A3-215ENST00000540317 SLC1A4P43007 532 aa13.46□□□□□ -0.25
CYB561A3-215ENST00000540317 SEMA3FQ13275 785 aa13.46□□□□□ -0.25
CYB561A3-215ENST00000540317 KCTD2Q14681 263 aa13.46□□□□□ -0.25
CYB561A3-215ENST00000540317 CCDC96Q2M329 555 aa13.46□□□□□ -0.25
CYB561A3-215ENST00000540317 MCTP2Q6DN12 878 aa13.46□□□□□ -0.25
CYB561A3-215ENST00000540317 SH3RF1Q7Z6J0 888 aa13.46□□□□□ -0.25
CYB561A3-215ENST00000540317 NEK8Q86SG6 692 aa13.46□□□□□ -0.25
CYB561A3-215ENST00000540317 DRC7Q8IY82 874 aa13.46□□□□□ -0.25
CYB561A3-215ENST00000540317 ADGRF4Q8IZF3 695 aa13.46□□□□□ -0.25
CYB561A3-215ENST00000540317 ANKLE1Q8NAG6 615 aa13.46□□□□□ -0.25
CYB561A3-215ENST00000540317 DIS3LQ8TF46 1054 aaKnown RBP13.46□□□□□ -0.25
CYB561A3-215ENST00000540317 DHX58Q96C10 678 aa13.46□□□□□ -0.25
CYB561A3-215ENST00000540317 EPSTI1Q96J88 318 aa13.46□□□□□ -0.25
CYB561A3-215ENST00000540317 AK8Q96MA6 479 aa13.46□□□□□ -0.25
CYB561A3-215ENST00000540317 MMP19Q99542 508 aa13.46□□□□□ -0.25
CYB561A3-215ENST00000540317 JMJD4Q9H9V9 463 aa13.46□□□□□ -0.25
CYB561A3-215ENST00000540317 GPCPD1Q9NPB8 672 aa13.46□□□□□ -0.25
CYB561A3-215ENST00000540317 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.46□□□□□ -0.25
CYB561A3-215ENST00000540317 ZNF214Q9UL59 606 aaPredicted RBP13.46□□□□□ -0.25
CYB561A3-215ENST00000540317 OGDHLQ9ULD0 1010 aa13.46□□□□□ -0.25
CYB561A3-215ENST00000540317 NR2E3Q9Y5X4 410 aa13.46□□□□□ -0.25
CYB561A3-215ENST00000540317 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.46□□□□□ -0.25
CYB561A3-215ENST00000540317 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.45□□□□□ -0.26
CYB561A3-215ENST00000540317 WNT7AO00755 349 aa13.45□□□□□ -0.26
CYB561A3-215ENST00000540317 EVI5O60447 810 aa13.45□□□□□ -0.26
CYB561A3-215ENST00000540317 PGK2P07205 417 aa13.45□□□□□ -0.26
CYB561A3-215ENST00000540317 MRPL12P52815 198 aaKnown RBP13.45□□□□□ -0.26
CYB561A3-215ENST00000540317 MYL5Q02045 173 aa13.45□□□□□ -0.26
CYB561A3-215ENST00000540317 INF2Q27J81 1249 aa13.45□□□□□ -0.26
CYB561A3-215ENST00000540317 SNRNP48Q6IEG0 339 aaKnown RBP13.45□□□□□ -0.26
CYB561A3-215ENST00000540317 PDILTQ8N807 584 aa13.45□□□□□ -0.26
CYB561A3-215ENST00000540317 GMCL1Q96IK5 515 aa13.45□□□□□ -0.26
CYB561A3-215ENST00000540317 GSDMAQ96QA5 445 aa13.45□□□□□ -0.26
CYB561A3-215ENST00000540317 NAP1L4Q99733 375 aaKnown RBP13.45□□□□□ -0.26
CYB561A3-215ENST00000540317 TEX13BQ9BXU2 312 aa13.45□□□□□ -0.26
CYB561A3-215ENST00000540317 RIC8AQ9NPQ8 531 aa13.45□□□□□ -0.26
CYB561A3-215ENST00000540317 CEP290O15078 2479 aa13.45□□□□□ -0.26
CYB561A3-215ENST00000540317 NEMFO60524 1076 aa13.45□□□□□ -0.26
CYB561A3-215ENST00000540317 MYL1P05976 194 aa13.45□□□□□ -0.26
CYB561A3-215ENST00000540317 COPB2P35606 906 aa13.45□□□□□ -0.26
CYB561A3-215ENST00000540317 TRAF1Q13077 416 aa13.45□□□□□ -0.26
CYB561A3-215ENST00000540317 MORC3Q14149 939 aa13.45□□□□□ -0.26
CYB561A3-215ENST00000540317 OLFML2BQ68BL8 750 aa13.45□□□□□ -0.26
CYB561A3-215ENST00000540317 LHX8Q68G74 356 aa13.45□□□□□ -0.26
CYB561A3-215ENST00000540317 USP49Q70CQ1 688 aa13.45□□□□□ -0.26
CYB561A3-215ENST00000540317 TEX2Q8IWB9 1127 aa13.45□□□□□ -0.26
CYB561A3-215ENST00000540317 REPS2Q8NFH8 660 aa13.45□□□□□ -0.26
CYB561A3-215ENST00000540317 RASGRP4Q8TDF6 673 aa13.45□□□□□ -0.26
CYB561A3-215ENST00000540317 CHURC1Q8WUH1 139 aa13.45□□□□□ -0.26
CYB561A3-215ENST00000540317 PAGE5Q96GU1 130 aa13.45□□□□□ -0.26
CYB561A3-215ENST00000540317 CPVLQ9H3G5 476 aa13.45□□□□□ -0.26
CYB561A3-215ENST00000540317 RAVER2Q9HCJ3 691 aaKnown RBP13.45□□□□□ -0.26
CYB561A3-215ENST00000540317 MAN1B1Q9UKM7 699 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms