RNA–Protein interactions for RNA: ENST00000540166.5

DDB1-217, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 3,906 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-217ENST00000540166 WNK4Q96J92 1243 aa9.58□□□□□ -0.88
DDB1-217ENST00000540166 PSMB7Q99436 277 aa9.58□□□□□ -0.88
DDB1-217ENST00000540166 MCOLN1Q9GZU1 580 aa9.58□□□□□ -0.88
DDB1-217ENST00000540166 SH2D4AQ9H788 454 aa9.58□□□□□ -0.88
DDB1-217ENST00000540166 TARSL2A2RTX5 802 aaKnown RBP9.57□□□□□ -0.88
DDB1-217ENST00000540166 SLC10A3P09131 477 aa9.57□□□□□ -0.88
DDB1-217ENST00000540166 NR1D1P20393 614 aa9.57□□□□□ -0.88
DDB1-217ENST00000540166 RWDD2BP57060 319 aa9.57□□□□□ -0.88
DDB1-217ENST00000540166 C2orf54Q08AI8 447 aa9.57□□□□□ -0.88
DDB1-217ENST00000540166 MYO1EQ12965 1108 aa9.57□□□□□ -0.88
DDB1-217ENST00000540166 SPDYE2Q495Y8 402 aa9.57□□□□□ -0.88
DDB1-217ENST00000540166 CCDC13Q8IYE1 715 aa9.57□□□□□ -0.88
DDB1-217ENST00000540166 DNAJC5GQ8N7S2 189 aa9.57□□□□□ -0.88
DDB1-217ENST00000540166 TCP11Q8WWU5 503 aa9.57□□□□□ -0.88
DDB1-217ENST00000540166 UBAC1Q9BSL1 405 aa9.57□□□□□ -0.88
DDB1-217ENST00000540166 KIF9Q9HAQ2 790 aa9.57□□□□□ -0.88
DDB1-217ENST00000540166 HDAC6Q9UBN7 1215 aa9.57□□□□□ -0.88
DDB1-217ENST00000540166 FSBPO95073 299 aa9.57□□□□□ -0.88
DDB1-217ENST00000540166 GKAP1Q5VSY0 366 aaPredicted RBP9.57□□□□□ -0.88
DDB1-217ENST00000540166 RRAGBQ5VZM2 374 aa9.57□□□□□ -0.88
DDB1-217ENST00000540166 TAX1BP1Q86VP1 789 aa9.57□□□□□ -0.88
DDB1-217ENST00000540166 THOC1Q96FV9 657 aaKnown RBP9.57□□□□□ -0.88
DDB1-217ENST00000540166 YIPF3Q9GZM5 350 aa9.57□□□□□ -0.88
DDB1-217ENST00000540166 POLD4Q9HCU8 107 aa9.57□□□□□ -0.88
DDB1-217ENST00000540166 BATF3Q9NR55 127 aa9.57□□□□□ -0.88
DDB1-217ENST00000540166 MCM8Q9UJA3 840 aa9.57□□□□□ -0.88
DDB1-217ENST00000540166 FAM205AQ6ZU69 1335 aa9.57□□□□□ -0.88
DDB1-217ENST00000540166 PASKQ96RG2 1323 aa9.57□□□□□ -0.88
DDB1-217ENST00000540166 ZBTB48P10074 688 aaPredicted RBP9.57□□□□□ -0.88
DDB1-217ENST00000540166 FCGRTP55899 365 aa9.57□□□□□ -0.88
DDB1-217ENST00000540166 GUCY1A3Q02108 690 aa9.57□□□□□ -0.88
DDB1-217ENST00000540166 CCNI2Q6ZMN8 369 aaPredicted RBP9.57□□□□□ -0.88
DDB1-217ENST00000540166 RASGRP2Q7LDG7 609 aa9.57□□□□□ -0.88
DDB1-217ENST00000540166 CLMNQ96JQ2 1002 aa9.57□□□□□ -0.88
DDB1-217ENST00000540166 CCDC43Q96MW1 224 aaKnown RBP9.57□□□□□ -0.88
DDB1-217ENST00000540166 ZKSCAN3Q9BRR0 538 aa9.57□□□□□ -0.88
DDB1-217ENST00000540166 DHX36Q9H2U1 1008 aaKnown RBP9.57□□□□□ -0.88
DDB1-217ENST00000540166 SLC5A4Q9NY91 659 aa9.57□□□□□ -0.88
DDB1-217ENST00000540166 SERTAD1Q9UHV2 236 aa9.57□□□□□ -0.88
DDB1-217ENST00000540166 KIF28PB7ZC32 967 aa9.56□□□□□ -0.88
DDB1-217ENST00000540166 TEX33O43247 280 aa9.56□□□□□ -0.88
DDB1-217ENST00000540166 NEFHP12036 1026 aa9.56□□□□□ -0.88
DDB1-217ENST00000540166 PLCD1P51178 756 aa9.56□□□□□ -0.88
DDB1-217ENST00000540166 APBA1Q02410 837 aa9.56□□□□□ -0.88
DDB1-217ENST00000540166 SPP2Q13103 211 aa9.56□□□□□ -0.88
DDB1-217ENST00000540166 PAK2Q13177 524 aa9.56□□□□□ -0.88
DDB1-217ENST00000540166 SPATA1Q5VX52 437 aa9.56□□□□□ -0.88
DDB1-217ENST00000540166 NLRP14Q86W24 1093 aa9.56□□□□□ -0.88
DDB1-217ENST00000540166 DIS3L2Q8IYB7 885 aaKnown RBP9.56□□□□□ -0.88
DDB1-217ENST00000540166 ZNF473Q8WTR7 871 aaKnown RBP9.56□□□□□ -0.88
DDB1-217ENST00000540166 SPAG5Q96R06 1193 aa9.56□□□□□ -0.88
DDB1-217ENST00000540166 MMS19Q96T76 1030 aa9.56□□□□□ -0.88
DDB1-217ENST00000540166 TANGO6Q9C0B7 1094 aa9.56□□□□□ -0.88
DDB1-217ENST00000540166 EPN3Q9H201 632 aa9.56□□□□□ -0.88
DDB1-217ENST00000540166 PI4KBQ9UBF8 816 aa9.56□□□□□ -0.88
DDB1-217ENST00000540166 MAN1B1Q9UKM7 699 aa9.56□□□□□ -0.88
DDB1-217ENST00000540166 KCNJ14Q9UNX9 436 aa9.56□□□□□ -0.88
DDB1-217ENST00000540166 GUCY2FP51841 1108 aa9.56□□□□□ -0.88
DDB1-217ENST00000540166 CYB5D1Q6P9G0 228 aa9.56□□□□□ -0.88
DDB1-217ENST00000540166 PI16Q6UXB8 463 aa9.56□□□□□ -0.88
DDB1-217ENST00000540166 FAM43BQ6ZT52 329 aaPredicted RBP9.56□□□□□ -0.88
DDB1-217ENST00000540166 RASAL3Q86YV0 1011 aa9.56□□□□□ -0.88
DDB1-217ENST00000540166 SH2D3CQ8N5H7 860 aa9.56□□□□□ -0.88
DDB1-217ENST00000540166 OR8K1Q8NGG5 319 aa9.56□□□□□ -0.88
DDB1-217ENST00000540166 CCDC47Q96A33 483 aaKnown RBP9.56□□□□□ -0.88
DDB1-217ENST00000540166 CCDC42Q96M95 316 aa9.56□□□□□ -0.88
DDB1-217ENST00000540166 CCT8L2Q96SF2 557 aa9.56□□□□□ -0.88
DDB1-217ENST00000540166 VCPKMTQ9H867 229 aa9.56□□□□□ -0.88
DDB1-217ENST00000540166 TAB2Q9NYJ8 693 aa9.56□□□□□ -0.88
DDB1-217ENST00000540166 PRKAG2Q9UGJ0 569 aa9.56□□□□□ -0.88
DDB1-217ENST00000540166 TUBE1Q9UJT0 475 aa9.56□□□□□ -0.88
DDB1-217ENST00000540166 DAGLAQ9Y4D2 1042 aa9.56□□□□□ -0.88
DDB1-217ENST00000540166 BTBD18B2RXH4 712 aa9.56□□□□□ -0.88
DDB1-217ENST00000540166 GCOM1H8Y6P7 765 aaPredicted RBP9.56□□□□□ -0.88
DDB1-217ENST00000540166 PPP1R37O75864 691 aa9.56□□□□□ -0.88
DDB1-217ENST00000540166 MYZAPP0CAP1 466 aa9.56□□□□□ -0.88
DDB1-217ENST00000540166 LSP1P33241 339 aa9.56□□□□□ -0.88
DDB1-217ENST00000540166 SF3A3Q12874 501 aaKnown RBP eCLIP9.56□□□□□ -0.883e-6■■■□□ 18.1
DDB1-217ENST00000540166 DRP2Q13474 957 aa9.56□□□□□ -0.88
DDB1-217ENST00000540166 PUS7LQ9H0K6 701 aaKnown RBP9.56□□□□□ -0.88
DDB1-217ENST00000540166 HAUS2Q9NVX0 235 aa9.56□□□□□ -0.88
DDB1-217ENST00000540166 UTYO14607 1347 aa9.56□□□□□ -0.88
DDB1-217ENST00000540166 FANCGO15287 622 aa9.55□□□□□ -0.88
DDB1-217ENST00000540166 AKR1B10O60218 316 aa9.55□□□□□ -0.88
DDB1-217ENST00000540166 ASNSP08243 561 aa9.55□□□□□ -0.88
DDB1-217ENST00000540166 ERCC5P28715 1186 aaPredicted RBP9.55□□□□□ -0.88
DDB1-217ENST00000540166 MRPS25P82663 173 aaKnown RBP9.55□□□□□ -0.88
DDB1-217ENST00000540166 SLC7A5Q01650 507 aa9.55□□□□□ -0.88
DDB1-217ENST00000540166 RABL6Q3YEC7 729 aaPredicted RBP9.55□□□□□ -0.88
DDB1-217ENST00000540166 NAA35Q5VZE5 725 aa9.55□□□□□ -0.88
DDB1-217ENST00000540166 EMBQ6PCB8 327 aa9.55□□□□□ -0.88
DDB1-217ENST00000540166 MFSD6Q6ZSS7 791 aa9.55□□□□□ -0.88
DDB1-217ENST00000540166 FAM83AQ86UY5 434 aa9.55□□□□□ -0.88
DDB1-217ENST00000540166 TRIML1Q8N9V2 468 aa9.55□□□□□ -0.88
DDB1-217ENST00000540166 CCDC63Q8NA47 563 aa9.55□□□□□ -0.88
DDB1-217ENST00000540166 TAF4BQ92750 862 aa9.55□□□□□ -0.88
DDB1-217ENST00000540166 ZBTB10Q96DT7 871 aa9.55□□□□□ -0.88
DDB1-217ENST00000540166 ZDHHC15Q96MV8 337 aa9.55□□□□□ -0.88
DDB1-217ENST00000540166 ARHGEF10LQ9HCE6 1279 aa9.55□□□□□ -0.88
DDB1-217ENST00000540166 LUC7LQ9NQ29 371 aaKnown RBP9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms