RNA–Protein interactions for RNA: ENST00000539843.5

UBE3B-211, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 2

Gene UBE3B, Length 586 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-211ENST00000539843 CALM1P0DP23 149 aa17.66■□□□□ 0.42
UBE3B-211ENST00000539843 CALM2P0DP24 149 aa17.66■□□□□ 0.42
UBE3B-211ENST00000539843 CALM3P0DP25 149 aa17.66■□□□□ 0.42
UBE3B-211ENST00000539843 UBA1P22314 1058 aaKnown RBP17.66■□□□□ 0.42
UBE3B-211ENST00000539843 NEDD9Q14511 834 aa17.66■□□□□ 0.42
UBE3B-211ENST00000539843 CNKSR3Q6P9H4 555 aa17.66■□□□□ 0.42
UBE3B-211ENST00000539843 HERC6Q8IVU3 1022 aa17.66■□□□□ 0.42
UBE3B-211ENST00000539843 ZNF654Q8IZM8 581 aa17.66■□□□□ 0.42
UBE3B-211ENST00000539843 MICALL1Q8N3F8 863 aa17.66■□□□□ 0.42
UBE3B-211ENST00000539843 USP38Q8NB14 1042 aa17.66■□□□□ 0.42
UBE3B-211ENST00000539843 PIBF1Q8WXW3 757 aa17.66■□□□□ 0.42
UBE3B-211ENST00000539843 TMEM87BQ96K49 555 aa17.66■□□□□ 0.42
UBE3B-211ENST00000539843 TLL1O43897 1013 aa17.65■□□□□ 0.42
UBE3B-211ENST00000539843 SMARCA1P28370 1054 aa17.65■□□□□ 0.42
UBE3B-211ENST00000539843 RBL2Q08999 1139 aa17.65■□□□□ 0.42
UBE3B-211ENST00000539843 CCDC85BQ15834 202 aaPredicted RBP17.65■□□□□ 0.42
UBE3B-211ENST00000539843 XRRA1Q6P2D8 792 aa17.65■□□□□ 0.42
UBE3B-211ENST00000539843 NLRX1Q86UT6 975 aa17.65■□□□□ 0.42
UBE3B-211ENST00000539843 MB21D2Q8IYB1 491 aaPredicted RBP17.65■□□□□ 0.42
UBE3B-211ENST00000539843 SPZ1Q9BXG8 430 aa17.65■□□□□ 0.42
UBE3B-211ENST00000539843 ZNF215Q9UL58 517 aaPredicted RBP17.65■□□□□ 0.42
UBE3B-211ENST00000539843 EMSYQ7Z589 1322 aa17.65■□□□□ 0.42
UBE3B-211ENST00000539843 C17orf102A2RUQ5 167 aa17.64■□□□□ 0.41
UBE3B-211ENST00000539843 FIBPO43427 364 aa17.64■□□□□ 0.41
UBE3B-211ENST00000539843 PRC1O43663 620 aa17.64■□□□□ 0.41
UBE3B-211ENST00000539843 CYTH3O43739 400 aa17.64■□□□□ 0.41
UBE3B-211ENST00000539843 GNAT1P11488 350 aa17.64■□□□□ 0.41
UBE3B-211ENST00000539843 CKBP12277 381 aa17.64■□□□□ 0.41
UBE3B-211ENST00000539843 HOXD8P13378 290 aaPredicted RBP17.64■□□□□ 0.41
UBE3B-211ENST00000539843 MYOGP15173 224 aa17.64■□□□□ 0.41
UBE3B-211ENST00000539843 MRPS5P82675 430 aaKnown RBP17.64■□□□□ 0.41
UBE3B-211ENST00000539843 IKBKEQ14164 716 aa17.64■□□□□ 0.41
UBE3B-211ENST00000539843 SKIV2LQ15477 1246 aaKnown RBP17.64■□□□□ 0.41
UBE3B-211ENST00000539843 HSDL1Q3SXM5 330 aa17.64■□□□□ 0.41
UBE3B-211ENST00000539843 RNF20Q5VTR2 975 aa17.64■□□□□ 0.41
UBE3B-211ENST00000539843 SYNE3Q6ZMZ3 975 aa17.64■□□□□ 0.41
UBE3B-211ENST00000539843 GIMAP8Q8ND71 665 aaPredicted RBP17.64■□□□□ 0.41
UBE3B-211ENST00000539843 USP26Q9BXU7 913 aa17.64■□□□□ 0.41
UBE3B-211ENST00000539843 TANC1Q9C0D5 1861 aa17.64■□□□□ 0.41
UBE3B-211ENST00000539843 KIAA1217Q5T5P2 1943 aa17.63■□□□□ 0.41
UBE3B-211ENST00000539843 ABHD14A-ACY1A0A1B0GW23 586 aa17.63■□□□□ 0.41
UBE3B-211ENST00000539843 HAS3O00219 553 aa17.63■□□□□ 0.41
UBE3B-211ENST00000539843 SORBS3O60504 671 aa17.63■□□□□ 0.41
UBE3B-211ENST00000539843 RGS20O76081 388 aa17.63■□□□□ 0.41
UBE3B-211ENST00000539843 ADGRE1Q14246 886 aa17.63■□□□□ 0.41
UBE3B-211ENST00000539843 AAK1Q2M2I8 961 aa17.63■□□□□ 0.41
UBE3B-211ENST00000539843 IL31RAQ8NI17 732 aa17.63■□□□□ 0.41
UBE3B-211ENST00000539843 IGDCC4Q8TDY8 1250 aa17.63■□□□□ 0.41
UBE3B-211ENST00000539843 VWCEQ96DN2 955 aa17.63■□□□□ 0.41
UBE3B-211ENST00000539843 CDHR1Q96JP9 859 aa17.63■□□□□ 0.41
UBE3B-211ENST00000539843 LY9Q9HBG7 655 aa17.63■□□□□ 0.41
UBE3B-211ENST00000539843 SLC12A7Q9Y666 1083 aa17.63■□□□□ 0.41
UBE3B-211ENST00000539843 H3BRB1 525 aa17.62■□□□□ 0.41
UBE3B-211ENST00000539843 CXCL10P02778 98 aa17.62■□□□□ 0.41
UBE3B-211ENST00000539843 ICAM3P32942 547 aa17.62■□□□□ 0.41
UBE3B-211ENST00000539843 ANTXR2P58335 489 aa17.62■□□□□ 0.41
UBE3B-211ENST00000539843 WDR5P61964 334 aaKnown RBP17.62■□□□□ 0.41
UBE3B-211ENST00000539843 METTL7BQ6UX53 244 aa17.62■□□□□ 0.41
UBE3B-211ENST00000539843 ARNTL2Q8WYA1 636 aa17.62■□□□□ 0.41
UBE3B-211ENST00000539843 INPP4AQ96PE3 977 aaPredicted RBP17.62■□□□□ 0.41
UBE3B-211ENST00000539843 TUT1Q9H6E5 874 aaKnown RBP17.62■□□□□ 0.41
UBE3B-211ENST00000539843 EHMT1Q9H9B1 1298 aa17.62■□□□□ 0.41
UBE3B-211ENST00000539843 SENP2Q9HC62 589 aa17.62■□□□□ 0.41
UBE3B-211ENST00000539843 ANO2Q9NQ90 1003 aa17.62■□□□□ 0.41
UBE3B-211ENST00000539843 LAMA2P24043 3122 aaKnown RBP17.62■□□□□ 0.41
UBE3B-211ENST00000539843 SPDYE3A6NKU9 549 aa17.61■□□□□ 0.41
UBE3B-211ENST00000539843 PIK3CDO00329 1044 aa17.61■□□□□ 0.41
UBE3B-211ENST00000539843 LGALS2P05162 132 aa17.61■□□□□ 0.41
UBE3B-211ENST00000539843 THPOP40225 353 aa17.61■□□□□ 0.41
UBE3B-211ENST00000539843 LIFRP42702 1097 aa17.61■□□□□ 0.41
UBE3B-211ENST00000539843 DHX38Q92620 1227 aaKnown RBP17.61■□□□□ 0.41
UBE3B-211ENST00000539843 ATP6V0A1Q93050 837 aa17.61■□□□□ 0.41
UBE3B-211ENST00000539843 ASB2Q96Q27 587 aa17.61■□□□□ 0.41
UBE3B-211ENST00000539843 MYL10Q9BUA6 226 aa17.61■□□□□ 0.41
UBE3B-211ENST00000539843 FRMPD4Q14CM0 1322 aa17.61■□□□□ 0.41
UBE3B-211ENST00000539843 RSPH10B2B2RC85 870 aa17.6■□□□□ 0.41
UBE3B-211ENST00000539843 SH2B2O14492 632 aaPredicted RBP17.6■□□□□ 0.41
UBE3B-211ENST00000539843 CAND2O75155 1236 aa17.6■□□□□ 0.41
UBE3B-211ENST00000539843 LGR5O75473 907 aa17.6■□□□□ 0.41
UBE3B-211ENST00000539843 RSPH10BP0C881 870 aa17.6■□□□□ 0.41
UBE3B-211ENST00000539843 SLC35G1Q2M3R5 365 aa17.6■□□□□ 0.41
UBE3B-211ENST00000539843 ZNF618Q5T7W0 954 aa17.6■□□□□ 0.41
UBE3B-211ENST00000539843 PCNX4Q63HM2 1172 aa17.6■□□□□ 0.41
UBE3B-211ENST00000539843 CYFIP1Q7L576 1253 aa17.6■□□□□ 0.41
UBE3B-211ENST00000539843 CTAGE1Q96RT6 745 aa17.6■□□□□ 0.41
UBE3B-211ENST00000539843 ESYT1Q9BSJ8 1104 aa17.6■□□□□ 0.41
UBE3B-211ENST00000539843 CERS4Q9HA82 394 aa17.6■□□□□ 0.41
UBE3B-211ENST00000539843 RTEL1Q9NZ71 1219 aa17.6■□□□□ 0.41
UBE3B-211ENST00000539843 TAF6LQ9Y6J9 622 aa17.6■□□□□ 0.41
UBE3B-211ENST00000539843 SPATA31C2B4DYI2 1134 aa17.59■□□□□ 0.41
UBE3B-211ENST00000539843 TNFRSF10AO00220 468 aa17.59■□□□□ 0.41
UBE3B-211ENST00000539843 SLC27A2O14975 620 aa17.59■□□□□ 0.41
UBE3B-211ENST00000539843 NBNO60934 754 aa17.59■□□□□ 0.41
UBE3B-211ENST00000539843 AMHP03971 560 aa17.59■□□□□ 0.41
UBE3B-211ENST00000539843 SMIM10L2AP0DMW4 78 aa17.59■□□□□ 0.41
UBE3B-211ENST00000539843 SMIM10L2BP0DMW5 78 aa17.59■□□□□ 0.41
UBE3B-211ENST00000539843 SP2Q02086 613 aa17.59■□□□□ 0.41
UBE3B-211ENST00000539843 CREB3L3Q68CJ9 461 aa17.59■□□□□ 0.41
UBE3B-211ENST00000539843 SERINC5Q86VE9 423 aa17.59■□□□□ 0.41
UBE3B-211ENST00000539843 ZFP91Q96JP5 570 aaPredicted RBP17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms