RNA–Protein interactions for RNA: ENST00000539019.1

SSPN-206, Transcript of sarcospan, humanhuman

TSL 1 (best)

Gene SSPN, Length 1,356 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSPN-206ENST00000539019 CYBBP04839 570 aa7.39□□□□□ -1.23
SSPN-206ENST00000539019 BMP7P18075 431 aa7.39□□□□□ -1.23
SSPN-206ENST00000539019 SEPHS1P49903 392 aa7.39□□□□□ -1.23
SSPN-206ENST00000539019 CORO7P57737 925 aa7.39□□□□□ -1.23
SSPN-206ENST00000539019 TMEM151BQ8IW70 566 aa7.39□□□□□ -1.23
SSPN-206ENST00000539019 KRTAP4-7Q9BYR0 210 aa7.39□□□□□ -1.23
SSPN-206ENST00000539019 APEX2Q9UBZ4 518 aa7.39□□□□□ -1.23
SSPN-206ENST00000539019 AKT3Q9Y243 479 aa7.39□□□□□ -1.23
SSPN-206ENST00000539019 BACE2Q9Y5Z0 518 aa7.39□□□□□ -1.23
SSPN-206ENST00000539019 ZNF142P52746 1687 aaPredicted RBP7.39□□□□□ -1.23
SSPN-206ENST00000539019 ADGRB3O60242 1522 aa7.39□□□□□ -1.23
SSPN-206ENST00000539019 IRS2Q9Y4H2 1338 aa7.39□□□□□ -1.23
SSPN-206ENST00000539019 NEURL4Q96JN8 1562 aa7.39□□□□□ -1.23
SSPN-206ENST00000539019 CLTCL1P53675 1640 aa7.38□□□□□ -1.23
SSPN-206ENST00000539019 MED14O60244 1454 aa7.38□□□□□ -1.23
SSPN-206ENST00000539019 ANKRD34BA5PLL1 514 aa7.38□□□□□ -1.23
SSPN-206ENST00000539019 KRTAP9-7A8MTY7 169 aa7.38□□□□□ -1.23
SSPN-206ENST00000539019 SRGAP3O43295 1099 aa7.38□□□□□ -1.23
SSPN-206ENST00000539019 BUB1BO60566 1050 aaPredicted RBP7.38□□□□□ -1.23
SSPN-206ENST00000539019 ZNF200P98182 395 aaPredicted RBP7.38□□□□□ -1.23
SSPN-206ENST00000539019 GRB10Q13322 594 aa7.38□□□□□ -1.23
SSPN-206ENST00000539019 CNKSR3Q6P9H4 555 aa7.38□□□□□ -1.23
SSPN-206ENST00000539019 LILRA6Q6PI73 481 aa7.38□□□□□ -1.23
SSPN-206ENST00000539019 FAM129CQ86XR2 697 aa7.38□□□□□ -1.23
SSPN-206ENST00000539019 CPNE8Q86YQ8 564 aa7.38□□□□□ -1.23
SSPN-206ENST00000539019 APBA2Q99767 749 aa7.38□□□□□ -1.23
SSPN-206ENST00000539019 F8W031 263 aaPredicted RBP7.37□□□□□ -1.23
SSPN-206ENST00000539019 PPP1R11O60927 126 aaPredicted RBP7.37□□□□□ -1.23
SSPN-206ENST00000539019 ERCC5P28715 1186 aaPredicted RBP7.37□□□□□ -1.23
SSPN-206ENST00000539019 AFF3P51826 1226 aaKnown RBP7.37□□□□□ -1.23
SSPN-206ENST00000539019 MRVI1Q9Y6F6 885 aa7.37□□□□□ -1.23
SSPN-206ENST00000539019 NRXN1Q9ULB1 1477 aa7.37□□□□□ -1.23
SSPN-206ENST00000539019 ZC3H12DA2A288 527 aaKnown RBP7.36□□□□□ -1.23
SSPN-206ENST00000539019 VMACQ2NL98 169 aa7.36□□□□□ -1.23
SSPN-206ENST00000539019 MARCH10Q8NA82 808 aaPredicted RBP7.36□□□□□ -1.23
SSPN-206ENST00000539019 ZCCHC4Q9H5U6 513 aa7.36□□□□□ -1.23
SSPN-206ENST00000539019 CAPN10Q9HC96 672 aa7.36□□□□□ -1.23
SSPN-206ENST00000539019 PARD6AQ9NPB6 346 aa7.36□□□□□ -1.23
SSPN-206ENST00000539019 RAPGEFL1Q9UHV5 662 aa7.36□□□□□ -1.23
SSPN-206ENST00000539019 PLA2G2DQ9UNK4 145 aa7.36□□□□□ -1.23
SSPN-206ENST00000539019 EMC9Q9Y3B6 208 aa7.36□□□□□ -1.23
SSPN-206ENST00000539019 RWDD3Q9Y3V2 267 aa7.36□□□□□ -1.23
SSPN-206ENST00000539019 KDM5AP29375 1690 aaKnown RBP7.36□□□□□ -1.23
SSPN-206ENST00000539019 UBR1Q8IWV7 1749 aa7.36□□□□□ -1.23
SSPN-206ENST00000539019 ADAMTS13Q76LX8 1427 aa7.36□□□□□ -1.23
SSPN-206ENST00000539019 STRCQ7RTU9 1775 aa7.35□□□□□ -1.23
SSPN-206ENST00000539019 SMAD7O15105 426 aaKnown RBP7.35□□□□□ -1.23
SSPN-206ENST00000539019 KCNH1O95259 989 aa7.35□□□□□ -1.23
SSPN-206ENST00000539019 GLI4P10075 376 aa7.35□□□□□ -1.23
SSPN-206ENST00000539019 PAMP19021 973 aa7.35□□□□□ -1.23
SSPN-206ENST00000539019 HOXA5P20719 270 aa7.35□□□□□ -1.23
SSPN-206ENST00000539019 PRR5P85299 388 aa7.35□□□□□ -1.23
SSPN-206ENST00000539019 VPS37DQ86XT2 251 aa7.35□□□□□ -1.23
SSPN-206ENST00000539019 THEMISQ8N1K5 641 aaPredicted RBP7.35□□□□□ -1.23
SSPN-206ENST00000539019 BVESQ8NE79 360 aa7.35□□□□□ -1.23
SSPN-206ENST00000539019 C20orf173Q96LM9 149 aa7.35□□□□□ -1.23
SSPN-206ENST00000539019 KCNC2Q96PR1 638 aa7.35□□□□□ -1.23
SSPN-206ENST00000539019 SIN3AQ96ST3 1273 aa7.35□□□□□ -1.23
SSPN-206ENST00000539019 RXFP1Q9HBX9 757 aa7.35□□□□□ -1.23
SSPN-206ENST00000539019 FBLN5Q9UBX5 448 aa7.35□□□□□ -1.23
SSPN-206ENST00000539019 NEXMIFQ5QGS0 1516 aa7.35□□□□□ -1.23
SSPN-206ENST00000539019 SPHKAPQ2M3C7 1700 aa7.35□□□□□ -1.23
SSPN-206ENST00000539019 NPHP3-ACAD11A0A0J9YXS1 232 aa7.34□□□□□ -1.23
SSPN-206ENST00000539019 TRIM13O60858 407 aa7.34□□□□□ -1.23
SSPN-206ENST00000539019 IGFBP6P24592 240 aaPredicted RBP7.34□□□□□ -1.23
SSPN-206ENST00000539019 NCAPHQ15003 741 aa7.34□□□□□ -1.23
SSPN-206ENST00000539019 LZTR1Q8N653 840 aa7.34□□□□□ -1.23
SSPN-206ENST00000539019 PWWP2AQ96N64 755 aa7.34□□□□□ -1.23
SSPN-206ENST00000539019 LGR4Q9BXB1 951 aa7.34□□□□□ -1.23
SSPN-206ENST00000539019 GPRC5CQ9NQ84 441 aa7.34□□□□□ -1.23
SSPN-206ENST00000539019 GULP1Q9UBP9 304 aa7.34□□□□□ -1.23
SSPN-206ENST00000539019 DBR1Q9UK59 544 aaKnown RBP7.34□□□□□ -1.23
SSPN-206ENST00000539019 SSBP05455 408 aaKnown RBP eCLIP7.33□□□□□ -1.24
SSPN-206ENST00000539019 PFKLP17858 780 aa7.33□□□□□ -1.24
SSPN-206ENST00000539019 FBLN1P23142 703 aa7.33□□□□□ -1.24
SSPN-206ENST00000539019 ZNF143P52747 638 aaPredicted RBP7.33□□□□□ -1.24
SSPN-206ENST00000539019 PPP1R14AQ96A00 147 aa7.33□□□□□ -1.24
SSPN-206ENST00000539019 ZNF428Q96B54 188 aa7.33□□□□□ -1.24
SSPN-206ENST00000539019 MTA3Q9BTC8 594 aa7.33□□□□□ -1.24
SSPN-206ENST00000539019 CLEC1BQ9P126 229 aa7.33□□□□□ -1.24
SSPN-206ENST00000539019 CCDC9Q9Y3X0 531 aaKnown RBP7.33□□□□□ -1.24
SSPN-206ENST00000539019 CCDC144AA2RUR9 1427 aa7.33□□□□□ -1.24
SSPN-206ENST00000539019 RIMS2Q9UQ26 1411 aa7.33□□□□□ -1.24
SSPN-206ENST00000539019 SCAF11Q99590 1463 aaKnown RBP7.33□□□□□ -1.24
SSPN-206ENST00000539019 PLEKHG1Q9ULL1 1385 aa7.33□□□□□ -1.24
SSPN-206ENST00000539019 RPGRIP1LQ68CZ1 1315 aa7.33□□□□□ -1.24
SSPN-206ENST00000539019 ADGRF5Q8IZF2 1346 aa7.33□□□□□ -1.24
SSPN-206ENST00000539019 C7orf72A4D263 438 aa7.33□□□□□ -1.24
SSPN-206ENST00000539019 NOP56O00567 594 aaKnown RBP7.33□□□□□ -1.24
SSPN-206ENST00000539019 NAT2P11245 290 aa7.33□□□□□ -1.24
SSPN-206ENST00000539019 LIMS1P48059 325 aa7.33□□□□□ -1.24
SSPN-206ENST00000539019 SCRN1Q12765 414 aa7.33□□□□□ -1.24
SSPN-206ENST00000539019 TARBP2Q15633 366 aaKnown RBP7.33□□□□□ -1.24
SSPN-206ENST00000539019 POMZP3Q6PJE2 187 aa7.33□□□□□ -1.24
SSPN-206ENST00000539019 C6orf15Q6UXA7 325 aaPredicted RBP7.33□□□□□ -1.24
SSPN-206ENST00000539019 COPS5Q92905 334 aa7.33□□□□□ -1.24
SSPN-206ENST00000539019 NRXN3Q9Y4C0 1643 aa7.32□□□□□ -1.24
SSPN-206ENST00000539019 CLSPNQ9HAW4 1339 aa7.32□□□□□ -1.24
SSPN-206ENST00000539019 TRBV23OR9-2A0A075B6M9 112 aa7.32□□□□□ -1.24
SSPN-206ENST00000539019 PLS3P13797 630 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms