RNA–Protein interactions for RNA: ENST00000538827.5

CD4-208, Transcript of CD4 molecule, humanhuman

TSL 1 (best)

Gene CD4, Length 985 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-208ENST00000538827 ARL6IP4Q66PJ3 421 aaKnown RBP15.98■□□□□ 0.15
CD4-208ENST00000538827 ADALQ6DHV7 355 aa15.98■□□□□ 0.15
CD4-208ENST00000538827 FAM133AQ8N9E0 248 aa15.98■□□□□ 0.15
CD4-208ENST00000538827 GPT2Q8TD30 523 aa15.98■□□□□ 0.15
CD4-208ENST00000538827 GJA10Q969M2 543 aa15.98■□□□□ 0.15
CD4-208ENST00000538827 MPHOSPH6Q99547 160 aaKnown RBP15.98■□□□□ 0.15
CD4-208ENST00000538827 GOLPH3LQ9H4A5 285 aa15.98■□□□□ 0.15
CD4-208ENST00000538827 MORC2Q9Y6X9 1032 aaPredicted RBP15.98■□□□□ 0.15
CD4-208ENST00000538827 ASTN1O14525 1302 aa15.97■□□□□ 0.15
CD4-208ENST00000538827 DOCK5Q9H7D0 1870 aa15.97■□□□□ 0.15
CD4-208ENST00000538827 IGLV3-22A0A075B6J6 115 aa15.97■□□□□ 0.15
CD4-208ENST00000538827 A0A1B0GVL5 298 aa15.97■□□□□ 0.15
CD4-208ENST00000538827 A0A1W2PQ27 194 aa15.97■□□□□ 0.15
CD4-208ENST00000538827 A0A1W2PQ64 194 aa15.97■□□□□ 0.15
CD4-208ENST00000538827 A0A1W2PQD8 194 aa15.97■□□□□ 0.15
CD4-208ENST00000538827 H0YGN5 161 aa15.97■□□□□ 0.15
CD4-208ENST00000538827 LIG1P18858 919 aa15.97■□□□□ 0.15
CD4-208ENST00000538827 MNX1P50219 401 aaPredicted RBP15.97■□□□□ 0.15
CD4-208ENST00000538827 MRPS9P82933 396 aaKnown RBP15.97■□□□□ 0.15
CD4-208ENST00000538827 AXDND1Q5T1B0 1012 aaPredicted RBP15.97■□□□□ 0.15
CD4-208ENST00000538827 CYP2W1Q8TAV3 490 aa15.97■□□□□ 0.15
CD4-208ENST00000538827 LENG9Q96B70 501 aa15.97■□□□□ 0.15
CD4-208ENST00000538827 FAM13BQ9NYF5 915 aa15.97■□□□□ 0.15
CD4-208ENST00000538827 UBIAD1Q9Y5Z9 338 aa15.97■□□□□ 0.15
CD4-208ENST00000538827 DNAJC25-GNG10A0A024R161 153 aa15.96■□□□□ 0.15
CD4-208ENST00000538827 B4DLN1 442 aa15.96■□□□□ 0.15
CD4-208ENST00000538827 TNPO2O14787 897 aaKnown RBP15.96■□□□□ 0.15
CD4-208ENST00000538827 MSH4O15457 936 aa15.96■□□□□ 0.15
CD4-208ENST00000538827 PFKFB1P16118 471 aa15.96■□□□□ 0.15
CD4-208ENST00000538827 TECP42680 631 aa15.96■□□□□ 0.15
CD4-208ENST00000538827 MTMR1Q13613 665 aa15.96■□□□□ 0.15
CD4-208ENST00000538827 GRB14Q14449 540 aa15.96■□□□□ 0.15
CD4-208ENST00000538827 IL17AQ16552 155 aa15.96■□□□□ 0.15
CD4-208ENST00000538827 SKOR2Q2VWA4 1001 aaPredicted RBP15.96■□□□□ 0.15
CD4-208ENST00000538827 XRRA1Q6P2D8 792 aa15.96■□□□□ 0.15
CD4-208ENST00000538827 SHC4Q6S5L8 630 aa15.96■□□□□ 0.15
CD4-208ENST00000538827 DPP9Q86TI2 863 aa15.96■□□□□ 0.15
CD4-208ENST00000538827 NLRX1Q86UT6 975 aa15.96■□□□□ 0.15
CD4-208ENST00000538827 SLFN12Q8IYM2 578 aa15.96■□□□□ 0.15
CD4-208ENST00000538827 RASSF8Q8NHQ8 419 aa15.96■□□□□ 0.15
CD4-208ENST00000538827 ETNPPLQ8TBG4 499 aa15.96■□□□□ 0.15
CD4-208ENST00000538827 MTMR9Q96QG7 549 aa15.96■□□□□ 0.15
CD4-208ENST00000538827 IWS1Q96ST2 819 aa15.96■□□□□ 0.15
CD4-208ENST00000538827 ZNF577Q9BSK1 485 aa15.96■□□□□ 0.15
CD4-208ENST00000538827 WDR11Q9BZH6 1224 aa15.96■□□□□ 0.15
CD4-208ENST00000538827 JADE2Q9NQC1 790 aa15.96■□□□□ 0.15
CD4-208ENST00000538827 DOCK3Q8IZD9 2030 aa15.95■□□□□ 0.14
CD4-208ENST00000538827 SLC15A5A6NIM6 579 aa15.95■□□□□ 0.14
CD4-208ENST00000538827 DDX39AO00148 427 aaKnown RBP15.95■□□□□ 0.14
CD4-208ENST00000538827 STRNO43815 780 aa15.95■□□□□ 0.14
CD4-208ENST00000538827 ARP10275 920 aa15.95■□□□□ 0.14
CD4-208ENST00000538827 ITGB5P18084 799 aa15.95■□□□□ 0.14
CD4-208ENST00000538827 LONP1P36776 959 aaKnown RBP15.95■□□□□ 0.14
CD4-208ENST00000538827 TXLNAP40222 546 aa15.95■□□□□ 0.14
CD4-208ENST00000538827 STXBP2Q15833 593 aa15.95■□□□□ 0.14
CD4-208ENST00000538827 KLHL40Q2TBA0 621 aa15.95■□□□□ 0.14
CD4-208ENST00000538827 GNPTABQ3T906 1256 aa15.95■□□□□ 0.14
CD4-208ENST00000538827 LRCH2Q5VUJ6 765 aa15.95■□□□□ 0.14
CD4-208ENST00000538827 RESP18Q5W5W9 173 aa15.95■□□□□ 0.14
CD4-208ENST00000538827 NIPA1Q7RTP0 329 aa15.95■□□□□ 0.14
CD4-208ENST00000538827 ABRAQ8N0Z2 381 aa15.95■□□□□ 0.14
CD4-208ENST00000538827 ZNF579Q8NAF0 562 aaKnown RBP15.95■□□□□ 0.14
CD4-208ENST00000538827 SYMPKQ92797 1274 aaKnown RBP15.95■□□□□ 0.14
CD4-208ENST00000538827 HAS1Q92839 578 aa15.95■□□□□ 0.14
CD4-208ENST00000538827 FGD4Q96M96 766 aa15.95■□□□□ 0.14
CD4-208ENST00000538827 TEKT3Q9BXF9 490 aa15.95■□□□□ 0.14
CD4-208ENST00000538827 RAB34Q9BZG1 259 aa15.95■□□□□ 0.14
CD4-208ENST00000538827 TTC12Q9H892 705 aaPredicted RBP15.95■□□□□ 0.14
CD4-208ENST00000538827 KCNMB3Q9NPA1 279 aa15.95■□□□□ 0.14
CD4-208ENST00000538827 BRCA2P51587 3418 aa15.95■□□□□ 0.14
CD4-208ENST00000538827 POTEMA6NI47 508 aa15.94■□□□□ 0.14
CD4-208ENST00000538827 PP2D1A8MPX8 630 aa15.94■□□□□ 0.14
CD4-208ENST00000538827 MEIS1O00470 390 aa15.94■□□□□ 0.14
CD4-208ENST00000538827 TBX3O15119 743 aa15.94■□□□□ 0.14
CD4-208ENST00000538827 COBLO75128 1261 aa15.94■□□□□ 0.14
CD4-208ENST00000538827 CMA1P23946 247 aa15.94■□□□□ 0.14
CD4-208ENST00000538827 NDUFA8P51970 172 aa15.94■□□□□ 0.14
CD4-208ENST00000538827 FCGRTP55899 365 aa15.94■□□□□ 0.14
CD4-208ENST00000538827 ZRSR1Q15695 479 aaKnown RBP15.94■□□□□ 0.14
CD4-208ENST00000538827 ZNF792Q3KQV3 632 aa15.94■□□□□ 0.14
CD4-208ENST00000538827 NCAPH2Q6IBW4 605 aa15.94■□□□□ 0.14
CD4-208ENST00000538827 CAVIN1Q6NZI2 390 aaKnown RBP15.94■□□□□ 0.14
CD4-208ENST00000538827 CHRDL2Q6WN34 429 aa15.94■□□□□ 0.14
CD4-208ENST00000538827 EEPD1Q7L9B9 569 aa15.94■□□□□ 0.14
CD4-208ENST00000538827 VSIG10LQ86VR7 867 aa15.94■□□□□ 0.14
CD4-208ENST00000538827 FAM20AQ96MK3 541 aa15.94■□□□□ 0.14
CD4-208ENST00000538827 TCEAL9Q9UHQ7 104 aa15.94■□□□□ 0.14
CD4-208ENST00000538827 CHMP2AO43633 222 aa15.93■□□□□ 0.14
CD4-208ENST00000538827 GAS7O60861 476 aa15.93■□□□□ 0.14
CD4-208ENST00000538827 STAM2O75886 525 aa15.93■□□□□ 0.14
CD4-208ENST00000538827 EDNRBP24530 442 aa15.93■□□□□ 0.14
CD4-208ENST00000538827 FXR2P51116 673 aaKnown RBP eCLIP15.93■□□□□ 0.14
CD4-208ENST00000538827 FAM160A1Q05DH4 1040 aa15.93■□□□□ 0.14
CD4-208ENST00000538827 KIF22Q14807 665 aa15.93■□□□□ 0.14
CD4-208ENST00000538827 ARHGEF6Q15052 776 aa15.93■□□□□ 0.14
CD4-208ENST00000538827 SEPT14Q6ZU15 432 aa15.93■□□□□ 0.14
CD4-208ENST00000538827 USP49Q70CQ1 688 aa15.93■□□□□ 0.14
CD4-208ENST00000538827 SOCS4Q8WXH5 440 aa15.93■□□□□ 0.14
CD4-208ENST00000538827 SLC5A5Q92911 643 aa15.93■□□□□ 0.14
CD4-208ENST00000538827 SYAP1Q96A49 352 aaPredicted RBP15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms