RNA–Protein interactions for RNA: ENST00000538570.5

COL4A6-208, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,528 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-208ENST00000538570 PHLPP2Q6ZVD8 1323 aa10.77□□□□□ -0.69
COL4A6-208ENST00000538570 ECEL1O95672 775 aa10.77□□□□□ -0.69
COL4A6-208ENST00000538570 TMOD1P28289 359 aa10.77□□□□□ -0.69
COL4A6-208ENST00000538570 NBPF20Q3BBV1 942 aa10.77□□□□□ -0.69
COL4A6-208ENST00000538570 SGO2Q562F6 1265 aa10.77□□□□□ -0.69
COL4A6-208ENST00000538570 KIAA2013Q8IYS2 634 aa10.77□□□□□ -0.69
COL4A6-208ENST00000538570 ARL10Q8N8L6 244 aa10.77□□□□□ -0.69
COL4A6-208ENST00000538570 CNOT10Q9H9A5 744 aaKnown RBP10.77□□□□□ -0.69
COL4A6-208ENST00000538570 SUGCTQ9HAC7 445 aa10.77□□□□□ -0.69
COL4A6-208ENST00000538570 FAM8A1Q9UBU6 413 aa10.77□□□□□ -0.69
COL4A6-208ENST00000538570 CSADQ9Y600 493 aa10.77□□□□□ -0.69
COL4A6-208ENST00000538570 SOS2Q07890 1332 aaPredicted RBP10.77□□□□□ -0.69
COL4A6-208ENST00000538570 PPP6R2O75170 966 aa10.77□□□□□ -0.69
COL4A6-208ENST00000538570 GSDMAQ96QA5 445 aa10.77□□□□□ -0.69
COL4A6-208ENST00000538570 ANLNQ9NQW6 1124 aa10.77□□□□□ -0.69
COL4A6-208ENST00000538570 ATP10AO60312 1499 aa10.77□□□□□ -0.69
COL4A6-208ENST00000538570 A0A1W2PQ27 194 aa10.76□□□□□ -0.69
COL4A6-208ENST00000538570 A0A1W2PQ64 194 aa10.76□□□□□ -0.69
COL4A6-208ENST00000538570 A0A1W2PQD8 194 aa10.76□□□□□ -0.69
COL4A6-208ENST00000538570 TTI1O43156 1089 aa10.76□□□□□ -0.69
COL4A6-208ENST00000538570 PSMC2P35998 433 aaKnown RBP10.76□□□□□ -0.69
COL4A6-208ENST00000538570 KPNA2P52292 529 aaKnown RBP10.76□□□□□ -0.69
COL4A6-208ENST00000538570 TNFAIP1Q13829 316 aa10.76□□□□□ -0.69
COL4A6-208ENST00000538570 ST13P4Q8IZP2 240 aaPredicted RBP10.76□□□□□ -0.69
COL4A6-208ENST00000538570 RETREG2Q8NC44 543 aa10.76□□□□□ -0.69
COL4A6-208ENST00000538570 SDR42E1Q8WUS8 393 aa10.76□□□□□ -0.69
COL4A6-208ENST00000538570 DHTKD1Q96HY7 919 aaPredicted RBP10.76□□□□□ -0.69
COL4A6-208ENST00000538570 HSPA2P54652 639 aa10.76□□□□□ -0.69
COL4A6-208ENST00000538570 RBL2Q08999 1139 aa10.76□□□□□ -0.69
COL4A6-208ENST00000538570 CERKLQ49MI3 558 aaPredicted RBP10.76□□□□□ -0.69
COL4A6-208ENST00000538570 ZNF653Q96CK0 615 aa10.76□□□□□ -0.69
COL4A6-208ENST00000538570 SPATA17Q96L03 361 aa10.76□□□□□ -0.69
COL4A6-208ENST00000538570 CCPG1Q9ULG6 757 aa10.76□□□□□ -0.69
COL4A6-208ENST00000538570 ATP8A1Q9Y2Q0 1164 aa10.76□□□□□ -0.69
COL4A6-208ENST00000538570 PGRMC1O00264 195 aaKnown RBP10.76□□□□□ -0.69
COL4A6-208ENST00000538570 AFPP02771 609 aaKnown RBP10.76□□□□□ -0.69
COL4A6-208ENST00000538570 GOLGA8HP0CJ92 632 aa10.76□□□□□ -0.69
COL4A6-208ENST00000538570 ACTN1P12814 892 aa10.76□□□□□ -0.69
COL4A6-208ENST00000538570 GSPT1P15170 499 aaKnown RBP10.76□□□□□ -0.69
COL4A6-208ENST00000538570 PTPREP23469 700 aa10.76□□□□□ -0.69
COL4A6-208ENST00000538570 POLA2Q14181 598 aa10.76□□□□□ -0.69
COL4A6-208ENST00000538570 TFDP1Q14186 410 aa10.76□□□□□ -0.69
COL4A6-208ENST00000538570 ODR4Q5SWX8 454 aa10.76□□□□□ -0.69
COL4A6-208ENST00000538570 BTN2A1Q7KYR7 527 aa10.76□□□□□ -0.69
COL4A6-208ENST00000538570 MCF2LO15068 1137 aa10.76□□□□□ -0.69
COL4A6-208ENST00000538570 TRPA1O75762 1119 aa10.76□□□□□ -0.69
COL4A6-208ENST00000538570 PCP11498 1178 aaKnown RBP10.76□□□□□ -0.69
COL4A6-208ENST00000538570 SNX1Q13596 522 aa10.76□□□□□ -0.69
COL4A6-208ENST00000538570 TCP11X2Q5H9J9 407 aa10.76□□□□□ -0.69
COL4A6-208ENST00000538570 PPP1R2P3Q6NXS1 205 aa10.76□□□□□ -0.69
COL4A6-208ENST00000538570 CCDC24Q8N4L8 307 aa10.76□□□□□ -0.69
COL4A6-208ENST00000538570 ANKRD36BP1Q96IX9 119 aa10.76□□□□□ -0.69
COL4A6-208ENST00000538570 PDE6AP16499 860 aa10.76□□□□□ -0.69
COL4A6-208ENST00000538570 C2orf54Q08AI8 447 aa10.76□□□□□ -0.69
COL4A6-208ENST00000538570 TDRD7Q8NHU6 1098 aaKnown RBP10.76□□□□□ -0.69
COL4A6-208ENST00000538570 CCHCR1Q8TD31 782 aa10.76□□□□□ -0.69
COL4A6-208ENST00000538570 FAM81BQ96LP2 452 aa10.76□□□□□ -0.69
COL4A6-208ENST00000538570 ANGPTL2Q9UKU9 493 aa10.76□□□□□ -0.69
COL4A6-208ENST00000538570 PACSIN2Q9UNF0 486 aaPredicted RBP10.76□□□□□ -0.69
COL4A6-208ENST00000538570 KIAA1024Q9UPX6 916 aa10.76□□□□□ -0.69
COL4A6-208ENST00000538570 NVLO15381 856 aaKnown RBP10.75□□□□□ -0.69
COL4A6-208ENST00000538570 PPIP5K2O43314 1243 aa10.75□□□□□ -0.69
COL4A6-208ENST00000538570 SYF2O95926 243 aaKnown RBP10.75□□□□□ -0.69
COL4A6-208ENST00000538570 GAP43P17677 238 aa10.75□□□□□ -0.69
COL4A6-208ENST00000538570 PLTPP55058 493 aa10.75□□□□□ -0.69
COL4A6-208ENST00000538570 EIF4A1P60842 406 aaKnown RBP10.75□□□□□ -0.69
COL4A6-208ENST00000538570 RPS8P62241 208 aaKnown RBP10.75□□□□□ -0.69
COL4A6-208ENST00000538570 DNAJC10Q8IXB1 793 aa10.75□□□□□ -0.69
COL4A6-208ENST00000538570 KIAA0232Q92628 1395 aa10.75□□□□□ -0.69
COL4A6-208ENST00000538570 XPOTO43592 962 aaKnown RBP10.75□□□□□ -0.69
COL4A6-208ENST00000538570 FOSP01100 380 aaPredicted RBP10.75□□□□□ -0.69
COL4A6-208ENST00000538570 PDIA3P30101 505 aaKnown RBP10.75□□□□□ -0.69
COL4A6-208ENST00000538570 HP1BP3Q5SSJ5 553 aaPredicted RBP10.75□□□□□ -0.69
COL4A6-208ENST00000538570 C16orf87Q6PH81 154 aa10.75□□□□□ -0.69
COL4A6-208ENST00000538570 FBXO38Q6PIJ6 1188 aa10.75□□□□□ -0.69
COL4A6-208ENST00000538570 PBKQ96KB5 322 aa10.75□□□□□ -0.69
COL4A6-208ENST00000538570 ATP7AQ04656 1500 aa10.75□□□□□ -0.69
COL4A6-208ENST00000538570 MT-ND3P03897 115 aa10.75□□□□□ -0.69
COL4A6-208ENST00000538570 DEUP1Q05D60 604 aa10.75□□□□□ -0.69
COL4A6-208ENST00000538570 RMI1Q9H9A7 625 aa10.75□□□□□ -0.69
COL4A6-208ENST00000538570 ARHGEF10O15013 1369 aa10.75□□□□□ -0.69
COL4A6-208ENST00000538570 KDM1AO60341 852 aa10.75□□□□□ -0.69
COL4A6-208ENST00000538570 PNMA6AP0CW24 399 aaPredicted RBP10.75□□□□□ -0.69
COL4A6-208ENST00000538570 NR2F2P24468 414 aa10.75□□□□□ -0.69
COL4A6-208ENST00000538570 ADCY1Q08828 1119 aa10.75□□□□□ -0.69
COL4A6-208ENST00000538570 SCRN1Q12765 414 aa10.75□□□□□ -0.69
COL4A6-208ENST00000538570 MYLK4Q86YV6 388 aaPredicted RBP10.75□□□□□ -0.69
COL4A6-208ENST00000538570 LARP4BQ92615 738 aaKnown RBP10.75□□□□□ -0.69
COL4A6-208ENST00000538570 KRT82Q9NSB4 513 aa10.75□□□□□ -0.69
COL4A6-208ENST00000538570 CTNND1O60716 968 aaKnown RBP10.75□□□□□ -0.69
COL4A6-208ENST00000538570 KRT1P04264 644 aa10.75□□□□□ -0.69
COL4A6-208ENST00000538570 CYP4F22Q6NT55 531 aa10.75□□□□□ -0.69
COL4A6-208ENST00000538570 P2RX5Q93086 422 aa10.75□□□□□ -0.69
COL4A6-208ENST00000538570 FGD4Q96M96 766 aa10.75□□□□□ -0.69
COL4A6-208ENST00000538570 FOXP1Q9H334 677 aaPredicted RBP10.75□□□□□ -0.69
COL4A6-208ENST00000538570 RNF14Q9UBS8 474 aa10.75□□□□□ -0.69
COL4A6-208ENST00000538570 TLK1Q9UKI8 766 aa10.75□□□□□ -0.69
COL4A6-208ENST00000538570 RWDD2BP57060 319 aa10.75□□□□□ -0.69
COL4A6-208ENST00000538570 CYP4A11Q02928 519 aa10.75□□□□□ -0.69
COL4A6-208ENST00000538570 ICA1Q05084 483 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms