RNA–Protein interactions for RNA: ENST00000537556.1

SRGAP1-202, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 2

Gene SRGAP1, Length 2,976 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-202ENST00000537556 LRRC34Q8IZ02 419 aa9.31□□□□□ -0.92
SRGAP1-202ENST00000537556 MYOCDQ8IZQ8 938 aa9.31□□□□□ -0.92
SRGAP1-202ENST00000537556 LTV1Q96GA3 475 aaPredicted RBP9.31□□□□□ -0.92
SRGAP1-202ENST00000537556 DHRS1Q96LJ7 313 aa9.31□□□□□ -0.92
SRGAP1-202ENST00000537556 CATSPER2Q96P56 530 aa9.31□□□□□ -0.92
SRGAP1-202ENST00000537556 MAP3K14Q99558 947 aa9.31□□□□□ -0.92
SRGAP1-202ENST00000537556 NACA2Q9H009 215 aa9.31□□□□□ -0.92
SRGAP1-202ENST00000537556 THAP9Q9H5L6 903 aa9.31□□□□□ -0.92
SRGAP1-202ENST00000537556 CCDC134Q9H6E4 229 aa9.31□□□□□ -0.92
SRGAP1-202ENST00000537556 NHEJ1Q9H9Q4 299 aaPredicted RBP9.31□□□□□ -0.92
SRGAP1-202ENST00000537556 CEP126Q9P2H0 1117 aa9.31□□□□□ -0.92
SRGAP1-202ENST00000537556 ZMYND8Q9ULU4 1186 aaPredicted RBP9.31□□□□□ -0.92
SRGAP1-202ENST00000537556 ZNF148Q9UQR1 794 aa9.31□□□□□ -0.92
SRGAP1-202ENST00000537556 USP15Q9Y4E8 981 aaPredicted RBP9.31□□□□□ -0.92
SRGAP1-202ENST00000537556 CAMSAP1Q5T5Y3 1602 aa9.31□□□□□ -0.92
SRGAP1-202ENST00000537556 MAP2P11137 1827 aaKnown RBP9.31□□□□□ -0.92
SRGAP1-202ENST00000537556 A0A1W2PQC6 194 aa9.31□□□□□ -0.92
SRGAP1-202ENST00000537556 GRID2IPA4D2P6 1211 aa9.31□□□□□ -0.92
SRGAP1-202ENST00000537556 RCCD1A6NED2 376 aa9.31□□□□□ -0.92
SRGAP1-202ENST00000537556 SNX3O60493 162 aa9.31□□□□□ -0.92
SRGAP1-202ENST00000537556 LGR5O75473 907 aa9.31□□□□□ -0.92
SRGAP1-202ENST00000537556 CXCR5P32302 372 aa9.31□□□□□ -0.92
SRGAP1-202ENST00000537556 RCN2Q14257 317 aa9.31□□□□□ -0.92
SRGAP1-202ENST00000537556 PLS1Q14651 629 aa9.31□□□□□ -0.92
SRGAP1-202ENST00000537556 MCMDC2Q4G0Z9 681 aa9.31□□□□□ -0.92
SRGAP1-202ENST00000537556 WDR59Q6PJI9 974 aa9.31□□□□□ -0.92
SRGAP1-202ENST00000537556 STOX1Q6ZVD7 989 aa9.31□□□□□ -0.92
SRGAP1-202ENST00000537556 HOOK3Q86VS8 718 aa9.31□□□□□ -0.92
SRGAP1-202ENST00000537556 CCDC65Q8IXS2 484 aa9.31□□□□□ -0.92
SRGAP1-202ENST00000537556 OR2W6PQ8NHA6 318 aa9.31□□□□□ -0.92
SRGAP1-202ENST00000537556 UBLCP1Q8WVY7 318 aaPredicted RBP9.31□□□□□ -0.92
SRGAP1-202ENST00000537556 LENG1Q96BZ8 264 aaPredicted RBP9.31□□□□□ -0.92
SRGAP1-202ENST00000537556 NUDCD1Q96RS6 583 aa9.31□□□□□ -0.92
SRGAP1-202ENST00000537556 HELLSQ9NRZ9 838 aa9.31□□□□□ -0.92
SRGAP1-202ENST00000537556 NKX1-2Q9UD57 310 aaPredicted RBP9.31□□□□□ -0.92
SRGAP1-202ENST00000537556 CHMP2BQ9UQN3 213 aa9.31□□□□□ -0.92
SRGAP1-202ENST00000537556 THRAP3Q9Y2W1 955 aaKnown RBP9.31□□□□□ -0.92
SRGAP1-202ENST00000537556 DUSP10Q9Y6W6 482 aa9.31□□□□□ -0.92
SRGAP1-202ENST00000537556 NEXMIFQ5QGS0 1516 aa9.31□□□□□ -0.92
SRGAP1-202ENST00000537556 SMAPO00193 183 aa9.3□□□□□ -0.92
SRGAP1-202ENST00000537556 SART1O43290 800 aaKnown RBP9.3□□□□□ -0.92
SRGAP1-202ENST00000537556 SUPT3HO75486 399 aa9.3□□□□□ -0.92
SRGAP1-202ENST00000537556 ATP5HO75947 161 aa9.3□□□□□ -0.92
SRGAP1-202ENST00000537556 TJP3O95049 919 aa9.3□□□□□ -0.92
SRGAP1-202ENST00000537556 CHN1P15882 459 aa9.3□□□□□ -0.92
SRGAP1-202ENST00000537556 MLH1P40692 756 aa9.3□□□□□ -0.92
SRGAP1-202ENST00000537556 MAP7D1Q3KQU3 841 aa9.3□□□□□ -0.92
SRGAP1-202ENST00000537556 TCP11X2Q5H9J9 407 aa9.3□□□□□ -0.92
SRGAP1-202ENST00000537556 OGFOD1Q8N543 542 aa9.3□□□□□ -0.92
SRGAP1-202ENST00000537556 GSDMAQ96QA5 445 aa9.3□□□□□ -0.92
SRGAP1-202ENST00000537556 RXFP1Q9HBX9 757 aa9.3□□□□□ -0.92
SRGAP1-202ENST00000537556 ABCF2Q9UG63 623 aa9.3□□□□□ -0.92
SRGAP1-202ENST00000537556 ARHGEF28Q8N1W1 1705 aaKnown RBP9.3□□□□□ -0.92
SRGAP1-202ENST00000537556 N4BP2Q86UW6 1770 aaPredicted RBP9.3□□□□□ -0.92
SRGAP1-202ENST00000537556 ZSCAN5CA6NGD5 496 aaPredicted RBP9.3□□□□□ -0.92
SRGAP1-202ENST00000537556 IPO5O00410 1097 aaKnown RBP9.3□□□□□ -0.92
SRGAP1-202ENST00000537556 CCNB1P14635 433 aa9.3□□□□□ -0.92
SRGAP1-202ENST00000537556 VHLP40337 213 aa9.3□□□□□ -0.92
SRGAP1-202ENST00000537556 DIXDC1Q155Q3 683 aa9.3□□□□□ -0.92
SRGAP1-202ENST00000537556 GSTA3Q16772 222 aa9.3□□□□□ -0.92
SRGAP1-202ENST00000537556 MDM1Q8TC05 714 aa9.3□□□□□ -0.92
SRGAP1-202ENST00000537556 HAUS1Q96CS2 278 aa9.3□□□□□ -0.92
SRGAP1-202ENST00000537556 MAML3Q96JK9 1138 aa9.3□□□□□ -0.92
SRGAP1-202ENST00000537556 CCDC42Q96M95 316 aa9.3□□□□□ -0.92
SRGAP1-202ENST00000537556 OLFM3Q96PB7 478 aa9.3□□□□□ -0.92
SRGAP1-202ENST00000537556 SH2D4AQ9H788 454 aa9.3□□□□□ -0.92
SRGAP1-202ENST00000537556 INTS9Q9NV88 658 aaKnown RBP9.3□□□□□ -0.92
SRGAP1-202ENST00000537556 NLRP2Q9NX02 1062 aa9.3□□□□□ -0.92
SRGAP1-202ENST00000537556 TAB2Q9NYJ8 693 aa9.3□□□□□ -0.92
SRGAP1-202ENST00000537556 ATP7AQ04656 1500 aa9.3□□□□□ -0.92
SRGAP1-202ENST00000537556 SH2B2O14492 632 aaPredicted RBP9.3□□□□□ -0.92
SRGAP1-202ENST00000537556 PEX11AO75192 247 aa9.3□□□□□ -0.92
SRGAP1-202ENST00000537556 KRT38O76015 456 aa9.3□□□□□ -0.92
SRGAP1-202ENST00000537556 SMARCA1P28370 1054 aa9.3□□□□□ -0.92
SRGAP1-202ENST00000537556 TEFQ10587 303 aa9.3□□□□□ -0.92
SRGAP1-202ENST00000537556 WASHC2DQ5SRD0 308 aa9.3□□□□□ -0.92
SRGAP1-202ENST00000537556 SULT6B1Q6IMI4 303 aa9.3□□□□□ -0.92
SRGAP1-202ENST00000537556 CCNJLQ8IV13 435 aa9.3□□□□□ -0.92
SRGAP1-202ENST00000537556 AGGF1Q8N302 714 aaeCLIP9.3□□□□□ -0.92
SRGAP1-202ENST00000537556 ZNF579Q8NAF0 562 aaKnown RBP9.3□□□□□ -0.92
SRGAP1-202ENST00000537556 RETREG2Q8NC44 543 aa9.3□□□□□ -0.92
SRGAP1-202ENST00000537556 FBXO41Q8TF61 875 aa9.3□□□□□ -0.92
SRGAP1-202ENST00000537556 IRGQQ8WZA9 623 aa9.3□□□□□ -0.92
SRGAP1-202ENST00000537556 TLCD1Q96CP7 247 aa9.3□□□□□ -0.92
SRGAP1-202ENST00000537556 ZNF333Q96JL9 665 aa9.3□□□□□ -0.92
SRGAP1-202ENST00000537556 PSMB7Q99436 277 aa9.3□□□□□ -0.92
SRGAP1-202ENST00000537556 KRT12Q99456 494 aa9.3□□□□□ -0.92
SRGAP1-202ENST00000537556 DDX23Q9BUQ8 820 aaKnown RBP9.3□□□□□ -0.92
SRGAP1-202ENST00000537556 DCLRE1BQ9H816 532 aa9.3□□□□□ -0.92
SRGAP1-202ENST00000537556 FAM114A2Q9NRY5 505 aa9.3□□□□□ -0.92
SRGAP1-202ENST00000537556 TXLNGQ9NUQ3 528 aa9.3□□□□□ -0.92
SRGAP1-202ENST00000537556 RPL26L1Q9UNX3 145 aaKnown RBP9.3□□□□□ -0.92
SRGAP1-202ENST00000537556 CAPN6Q9Y6Q1 641 aa9.3□□□□□ -0.92
SRGAP1-202ENST00000537556 ZFYVE16Q7Z3T8 1539 aa9.29□□□□□ -0.92
SRGAP1-202ENST00000537556 KCNJ18B7U540 433 aa9.29□□□□□ -0.92
SRGAP1-202ENST00000537556 RAD21O60216 631 aa9.29□□□□□ -0.92
SRGAP1-202ENST00000537556 ASLP04424 464 aa9.29□□□□□ -0.92
SRGAP1-202ENST00000537556 RXRBP28702 533 aa9.29□□□□□ -0.92
SRGAP1-202ENST00000537556 KCNJ12Q14500 433 aa9.29□□□□□ -0.92
SRGAP1-202ENST00000537556 UAP1Q16222 522 aaPredicted RBP9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms