RNA–Protein interactions for RNA: ENST00000537335.5

POLR1B-216, Transcript of RNA polymerase I subunit B, humanhuman

TSL 2 BASIC

Gene POLR1B, Length 4,961 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1B-216ENST00000537335 EIF4A3P38919 411 aaKnown RBP12.76□□□□□ -0.37
POLR1B-216ENST00000537335 KCNB1Q14721 858 aa12.76□□□□□ -0.37
POLR1B-216ENST00000537335 SGO2Q562F6 1265 aa12.76□□□□□ -0.37
POLR1B-216ENST00000537335 EPM2AIP1Q7L775 607 aaPredicted RBP12.76□□□□□ -0.37
POLR1B-216ENST00000537335 FAM96AQ9H5X1 160 aa12.76□□□□□ -0.37
POLR1B-216ENST00000537335 DKK3Q9UBP4 350 aa12.76□□□□□ -0.37
POLR1B-216ENST00000537335 APOBEC2Q9Y235 224 aaKnown RBP12.76□□□□□ -0.37
POLR1B-216ENST00000537335 TMA7Q9Y2S6 64 aaKnown RBP12.76□□□□□ -0.37
POLR1B-216ENST00000537335 PODXLO00592 558 aa12.76□□□□□ -0.37
POLR1B-216ENST00000537335 TSPAN9O75954 239 aa12.76□□□□□ -0.37
POLR1B-216ENST00000537335 PECAM1P16284 738 aaPredicted RBP12.76□□□□□ -0.37
POLR1B-216ENST00000537335 FSCBQ5H9T9 825 aa12.76□□□□□ -0.37
POLR1B-216ENST00000537335 BSPRYQ5W0U4 402 aa12.76□□□□□ -0.37
POLR1B-216ENST00000537335 KSR2Q6VAB6 950 aa12.76□□□□□ -0.37
POLR1B-216ENST00000537335 TOM1L2Q6ZVM7 507 aa12.76□□□□□ -0.37
POLR1B-216ENST00000537335 HORMAD1Q86X24 394 aa12.76□□□□□ -0.37
POLR1B-216ENST00000537335 USP40Q9NVE5 1235 aa12.76□□□□□ -0.37
POLR1B-216ENST00000537335 TRMT112Q9UI30 125 aaKnown RBP12.76□□□□□ -0.37
POLR1B-216ENST00000537335 FAM135BQ49AJ0 1406 aa12.76□□□□□ -0.37
POLR1B-216ENST00000537335 IPO5O00410 1097 aaKnown RBP12.76□□□□□ -0.37
POLR1B-216ENST00000537335 EXOC3O60645 756 aa12.76□□□□□ -0.37
POLR1B-216ENST00000537335 ATF7P17544 494 aaPredicted RBP12.76□□□□□ -0.37
POLR1B-216ENST00000537335 ST13P50502 369 aaKnown RBP12.76□□□□□ -0.37
POLR1B-216ENST00000537335 DEFA1P59665 94 aa12.76□□□□□ -0.37
POLR1B-216ENST00000537335 DEFA3P59666 94 aa12.76□□□□□ -0.37
POLR1B-216ENST00000537335 TBL3Q12788 808 aaKnown RBP12.76□□□□□ -0.37
POLR1B-216ENST00000537335 KIF22Q14807 665 aa12.76□□□□□ -0.37
POLR1B-216ENST00000537335 PDXDC1Q6P996 788 aa12.76□□□□□ -0.37
POLR1B-216ENST00000537335 ANKLE2Q86XL3 938 aa12.76□□□□□ -0.37
POLR1B-216ENST00000537335 SRRM1Q8IYB3 904 aaKnown RBP12.76□□□□□ -0.37
POLR1B-216ENST00000537335 LINS1Q8NG48 757 aa12.76□□□□□ -0.37
POLR1B-216ENST00000537335 RIN2Q8WYP3 895 aaPredicted RBP12.76□□□□□ -0.37
POLR1B-216ENST00000537335 DACH2Q96NX9 599 aa12.76□□□□□ -0.37
POLR1B-216ENST00000537335 SNX25Q9H3E2 840 aa12.76□□□□□ -0.37
POLR1B-216ENST00000537335 DNAJC17Q9NVM6 304 aaKnown RBP12.76□□□□□ -0.37
POLR1B-216ENST00000537335 DCTN4Q9UJW0 460 aa12.76□□□□□ -0.37
POLR1B-216ENST00000537335 COPG1Q9Y678 874 aaKnown RBP12.76□□□□□ -0.37
POLR1B-216ENST00000537335 IGF2BP3O00425 579 aaKnown RBP eCLIP12.75□□□□□ -0.37
POLR1B-216ENST00000537335 BYSLQ13895 437 aaKnown RBP12.75□□□□□ -0.37
POLR1B-216ENST00000537335 KRT31Q15323 416 aa12.75□□□□□ -0.37
POLR1B-216ENST00000537335 C10orf76Q5T2E6 689 aa12.75□□□□□ -0.37
POLR1B-216ENST00000537335 LMBR1LQ6UX01 489 aa12.75□□□□□ -0.37
POLR1B-216ENST00000537335 ZBED2Q9BTP6 218 aa12.75□□□□□ -0.37
POLR1B-216ENST00000537335 CCDC90BQ9GZT6 254 aa12.75□□□□□ -0.37
POLR1B-216ENST00000537335 BTBD7Q9P203 1132 aa12.75□□□□□ -0.37
POLR1B-216ENST00000537335 CCPG1Q9ULG6 757 aa12.75□□□□□ -0.37
POLR1B-216ENST00000537335 PHF20L1A8MW92 1017 aa12.75□□□□□ -0.37
POLR1B-216ENST00000537335 CAPN1P07384 714 aa12.75□□□□□ -0.37
POLR1B-216ENST00000537335 ACTN1P12814 892 aa12.75□□□□□ -0.37
POLR1B-216ENST00000537335 PTGISQ16647 500 aa12.75□□□□□ -0.37
POLR1B-216ENST00000537335 FAM186BQ8IYM0 893 aa12.75□□□□□ -0.37
POLR1B-216ENST00000537335 RNF217Q8TC41 542 aa12.75□□□□□ -0.37
POLR1B-216ENST00000537335 SCAF11Q99590 1463 aaKnown RBP12.75□□□□□ -0.37
POLR1B-216ENST00000537335 KIF11P52732 1056 aa12.75□□□□□ -0.37
POLR1B-216ENST00000537335 CDR2LQ86X02 465 aaPredicted RBP12.75□□□□□ -0.37
POLR1B-216ENST00000537335 USP33Q8TEY7 942 aa12.75□□□□□ -0.37
POLR1B-216ENST00000537335 CHPF2Q9P2E5 772 aa12.75□□□□□ -0.37
POLR1B-216ENST00000537335 USP19O94966 1318 aa12.75□□□□□ -0.37
POLR1B-216ENST00000537335 CCDC22O60826 627 aa12.74□□□□□ -0.37
POLR1B-216ENST00000537335 MARK3P27448 753 aa12.74□□□□□ -0.37
POLR1B-216ENST00000537335 MLH1P40692 756 aa12.74□□□□□ -0.37
POLR1B-216ENST00000537335 SEC24CP53992 1094 aa12.74□□□□□ -0.37
POLR1B-216ENST00000537335 ANKRD13DQ6ZTN6 518 aa12.74□□□□□ -0.37
POLR1B-216ENST00000537335 NME9Q86XW9 330 aa12.74□□□□□ -0.37
POLR1B-216ENST00000537335 C3orf20Q8ND61 904 aa12.74□□□□□ -0.37
POLR1B-216ENST00000537335 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.74□□□□□ -0.37
POLR1B-216ENST00000537335 SYBUQ9NX95 663 aa12.74□□□□□ -0.37
POLR1B-216ENST00000537335 AHCYL1O43865 530 aa12.74□□□□□ -0.37
POLR1B-216ENST00000537335 TMPRSS15P98073 1019 aa12.74□□□□□ -0.37
POLR1B-216ENST00000537335 MESDQ14696 234 aa12.74□□□□□ -0.37
POLR1B-216ENST00000537335 E4F1Q66K89 784 aaPredicted RBP12.74□□□□□ -0.37
POLR1B-216ENST00000537335 MLXIPLQ9NP71 852 aa12.74□□□□□ -0.37
POLR1B-216ENST00000537335 TBC1D7Q9P0N9 293 aa12.74□□□□□ -0.37
POLR1B-216ENST00000537335 GGT7Q9UJ14 662 aa12.74□□□□□ -0.37
POLR1B-216ENST00000537335 MAN1B1Q9UKM7 699 aa12.74□□□□□ -0.37
POLR1B-216ENST00000537335 CCNT1O60563 726 aaKnown RBP12.74□□□□□ -0.37
POLR1B-216ENST00000537335 SASH1O94885 1247 aa12.74□□□□□ -0.37
POLR1B-216ENST00000537335 ZRANB2O95218 330 aaKnown RBP eCLIP12.74□□□□□ -0.37
POLR1B-216ENST00000537335 PMS2P54278 862 aa12.74□□□□□ -0.37
POLR1B-216ENST00000537335 RAPGEF5Q92565 580 aa12.74□□□□□ -0.37
POLR1B-216ENST00000537335 TRIM63Q969Q1 353 aa12.74□□□□□ -0.37
POLR1B-216ENST00000537335 FUT8Q9BYC5 575 aa12.74□□□□□ -0.37
POLR1B-216ENST00000537335 TTC21BQ7Z4L5 1316 aa12.74□□□□□ -0.37
POLR1B-216ENST00000537335 ESYT3A0FGR9 886 aa12.74□□□□□ -0.37
POLR1B-216ENST00000537335 TTI1O43156 1089 aa12.74□□□□□ -0.37
POLR1B-216ENST00000537335 STRNO43815 780 aa12.74□□□□□ -0.37
POLR1B-216ENST00000537335 HIC1Q14526 733 aa12.74□□□□□ -0.37
POLR1B-216ENST00000537335 CCNI2Q6ZMN8 369 aaPredicted RBP12.74□□□□□ -0.37
POLR1B-216ENST00000537335 XPO6Q96QU8 1125 aaKnown RBP12.74□□□□□ -0.37
POLR1B-216ENST00000537335 CAB39Q9Y376 341 aaPredicted RBP12.74□□□□□ -0.37
POLR1B-216ENST00000537335 IQANK1A0A1B0GTG1 560 aa12.73□□□□□ -0.37
POLR1B-216ENST00000537335 ROR2Q01974 943 aaKnown RBP12.73□□□□□ -0.37
POLR1B-216ENST00000537335 BTKQ06187 659 aa12.73□□□□□ -0.37
POLR1B-216ENST00000537335 SEMA3FQ13275 785 aa12.73□□□□□ -0.37
POLR1B-216ENST00000537335 LRRC14Q15048 493 aa12.73□□□□□ -0.37
POLR1B-216ENST00000537335 RFX8Q6ZV50 586 aa12.73□□□□□ -0.37
POLR1B-216ENST00000537335 ADCK1Q86TW2 530 aa12.73□□□□□ -0.37
POLR1B-216ENST00000537335 KIF2BQ8N4N8 673 aa12.73□□□□□ -0.37
POLR1B-216ENST00000537335 HDAC11Q96DB2 347 aa12.73□□□□□ -0.37
POLR1B-216ENST00000537335 CCT7Q99832 543 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms