RNA–Protein interactions for RNA: ENST00000535689.5

SNHG1-202, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-202ENST00000535689 FRS2Q8WU20 508 aa4.55□□□□□ -1.68
SNHG1-202ENST00000535689 LINC01599Q8WXQ3 324 aa4.55□□□□□ -1.68
SNHG1-202ENST00000535689 OSBP2Q969R2 916 aa4.55□□□□□ -1.68
SNHG1-202ENST00000535689 ASIC4Q96FT7 647 aa4.55□□□□□ -1.68
SNHG1-202ENST00000535689 TRMT2BQ96GJ1 504 aaKnown RBP4.55□□□□□ -1.68
SNHG1-202ENST00000535689 AP5M1Q9H0R1 490 aa4.55□□□□□ -1.68
SNHG1-202ENST00000535689 SLC6A17Q9H1V8 727 aa4.55□□□□□ -1.68
SNHG1-202ENST00000535689 CABP5Q9NP86 173 aa4.55□□□□□ -1.68
SNHG1-202ENST00000535689 PDLIM7Q9NR12 457 aa4.55□□□□□ -1.68
SNHG1-202ENST00000535689 ERVK13-1Q9NX77 482 aa4.55□□□□□ -1.68
SNHG1-202ENST00000535689 CLEC1BQ9P126 229 aa4.55□□□□□ -1.68
SNHG1-202ENST00000535689 NDOR1Q9UHB4 597 aa4.55□□□□□ -1.68
SNHG1-202ENST00000535689 EID1Q9Y6B2 187 aa4.55□□□□□ -1.68
SNHG1-202ENST00000535689 FAM135AQ9P2D6 1515 aa4.55□□□□□ -1.68
SNHG1-202ENST00000535689 KIDINS220Q9ULH0 1771 aa4.55□□□□□ -1.68
SNHG1-202ENST00000535689 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP4.54□□□□□ -1.687e-33■□□□□ 8.4
SNHG1-202ENST00000535689 DEPDC5O75140 1603 aa4.54□□□□□ -1.68
SNHG1-202ENST00000535689 MYO3AQ8NEV4 1616 aa4.54□□□□□ -1.68
SNHG1-202ENST00000535689 WASHC2CQ9Y4E1 1318 aa4.54□□□□□ -1.68
SNHG1-202ENST00000535689 FADS2P1A8MWK0 482 aa4.54□□□□□ -1.68
SNHG1-202ENST00000535689 DGKIO75912 1065 aa4.54□□□□□ -1.68
SNHG1-202ENST00000535689 ZBTB7AO95365 584 aa4.54□□□□□ -1.68
SNHG1-202ENST00000535689 HPXP02790 462 aa4.54□□□□□ -1.68
SNHG1-202ENST00000535689 CAPNS1P04632 268 aa4.54□□□□□ -1.68
SNHG1-202ENST00000535689 MPOP05164 745 aa4.54□□□□□ -1.68
SNHG1-202ENST00000535689 PNLIPP16233 465 aa4.54□□□□□ -1.68
SNHG1-202ENST00000535689 HK2P52789 917 aa4.54□□□□□ -1.68
SNHG1-202ENST00000535689 GYS2P54840 703 aa4.54□□□□□ -1.68
SNHG1-202ENST00000535689 CYP4F8P98187 520 aa4.54□□□□□ -1.68
SNHG1-202ENST00000535689 PABPC4Q13310 644 aaKnown RBP eCLIP4.54□□□□□ -1.68
SNHG1-202ENST00000535689 SQSTM1Q13501 440 aa4.54□□□□□ -1.68
SNHG1-202ENST00000535689 MEX3CQ5U5Q3 659 aaKnown RBP4.54□□□□□ -1.68
SNHG1-202ENST00000535689 CYP4F22Q6NT55 531 aa4.54□□□□□ -1.68
SNHG1-202ENST00000535689 DCP2Q8IU60 420 aaKnown RBP4.54□□□□□ -1.68
SNHG1-202ENST00000535689 ZC3H7AQ8IWR0 971 aaKnown RBP4.54□□□□□ -1.68
SNHG1-202ENST00000535689 TRIM48Q8IWZ4 208 aa4.54□□□□□ -1.68
SNHG1-202ENST00000535689 NLGN4XQ8N0W4 816 aa4.54□□□□□ -1.68
SNHG1-202ENST00000535689 LZTR1Q8N653 840 aa4.54□□□□□ -1.68
SNHG1-202ENST00000535689 NETO2Q8NC67 525 aa4.54□□□□□ -1.68
SNHG1-202ENST00000535689 ABHD4Q8TB40 342 aa4.54□□□□□ -1.68
SNHG1-202ENST00000535689 EXOC2Q96KP1 924 aa4.54□□□□□ -1.68
SNHG1-202ENST00000535689 PHF20Q9BVI0 1012 aa4.54□□□□□ -1.68
SNHG1-202ENST00000535689 ADAMTS10Q9H324 1103 aa4.54□□□□□ -1.68
SNHG1-202ENST00000535689 EPB41L1Q9H4G0 881 aa4.54□□□□□ -1.68
SNHG1-202ENST00000535689 RC3H2Q9HBD1 1191 aaKnown RBP4.54□□□□□ -1.68
SNHG1-202ENST00000535689 NGRNQ9NPE2 291 aaKnown RBP4.54□□□□□ -1.68
SNHG1-202ENST00000535689 GPRC5CQ9NQ84 441 aa4.54□□□□□ -1.68
SNHG1-202ENST00000535689 PAK6Q9NQU5 681 aaPredicted RBP4.54□□□□□ -1.68
SNHG1-202ENST00000535689 MAPRE3Q9UPY8 281 aa4.54□□□□□ -1.68
SNHG1-202ENST00000535689 ZKSCAN5Q9Y2L8 839 aa4.54□□□□□ -1.68
SNHG1-202ENST00000535689 MED14O60244 1454 aa4.54□□□□□ -1.68
SNHG1-202ENST00000535689 EEA1Q15075 1411 aa4.54□□□□□ -1.68
SNHG1-202ENST00000535689 ABCA6Q8N139 1617 aa4.54□□□□□ -1.68
SNHG1-202ENST00000535689 TMEM82A0PJX8 343 aa4.53□□□□□ -1.68
SNHG1-202ENST00000535689 ADAMTS4O75173 837 aa4.53□□□□□ -1.68
SNHG1-202ENST00000535689 JUNBP17275 347 aaPredicted RBP4.53□□□□□ -1.68
SNHG1-202ENST00000535689 GP2P55259 537 aaKnown RBP4.53□□□□□ -1.68
SNHG1-202ENST00000535689 FAPQ12884 760 aa4.53□□□□□ -1.68
SNHG1-202ENST00000535689 SLC9A5Q14940 896 aa4.53□□□□□ -1.68
SNHG1-202ENST00000535689 CRY1Q16526 586 aa4.53□□□□□ -1.68
SNHG1-202ENST00000535689 LBX2Q6XYB7 198 aa4.53□□□□□ -1.68
SNHG1-202ENST00000535689 CEP68Q76N32 757 aa4.53□□□□□ -1.68
SNHG1-202ENST00000535689 KIF18BQ86Y91 864 aa4.53□□□□□ -1.68
SNHG1-202ENST00000535689 RIOX2Q8IUF8 465 aa4.53□□□□□ -1.68
SNHG1-202ENST00000535689 PASD1Q8IV76 773 aa4.53□□□□□ -1.68
SNHG1-202ENST00000535689 FLAD1Q8NFF5 587 aa4.53□□□□□ -1.68
SNHG1-202ENST00000535689 NUP43Q8NFH3 380 aa4.53□□□□□ -1.68
SNHG1-202ENST00000535689 PHOSPHO1Q8TCT1 267 aa4.53□□□□□ -1.68
SNHG1-202ENST00000535689 CHAC2Q8WUX2 184 aa4.53□□□□□ -1.68
SNHG1-202ENST00000535689 FBXW5Q969U6 566 aa4.53□□□□□ -1.68
SNHG1-202ENST00000535689 PEX11GQ96HA9 241 aa4.53□□□□□ -1.68
SNHG1-202ENST00000535689 CAAP1Q9H8G2 361 aa4.53□□□□□ -1.68
SNHG1-202ENST00000535689 PCDH18Q9HCL0 1135 aa4.53□□□□□ -1.68
SNHG1-202ENST00000535689 DBR1Q9UK59 544 aaKnown RBP4.53□□□□□ -1.68
SNHG1-202ENST00000535689 ACSL6Q9UKU0 697 aa4.53□□□□□ -1.68
SNHG1-202ENST00000535689 MINPP1Q9UNW1 487 aa4.53□□□□□ -1.68
SNHG1-202ENST00000535689 PLEKHH2Q8IVE3 1493 aa4.53□□□□□ -1.68
SNHG1-202ENST00000535689 NPHP4O75161 1426 aaPredicted RBP4.53□□□□□ -1.68
SNHG1-202ENST00000535689 TROQ12816 1431 aaPredicted RBP4.53□□□□□ -1.68
SNHG1-202ENST00000535689 RNF17Q9BXT8 1623 aaKnown RBP4.53□□□□□ -1.68
SNHG1-202ENST00000535689 TNRQ92752 1358 aa4.53□□□□□ -1.69
SNHG1-202ENST00000535689 CFAP65Q6ZU64 1925 aaKnown RBP4.52□□□□□ -1.69
SNHG1-202ENST00000535689 SPATA31A6Q5VVP1 1343 aa4.52□□□□□ -1.69
SNHG1-202ENST00000535689 ADGBQ8N7X0 1667 aa4.52□□□□□ -1.69
SNHG1-202ENST00000535689 ITSN2Q9NZM3 1697 aa4.52□□□□□ -1.69
SNHG1-202ENST00000535689 A2MP01023 1474 aa4.52□□□□□ -1.69
SNHG1-202ENST00000535689 NLRP1Q9C000 1473 aa4.52□□□□□ -1.69
SNHG1-202ENST00000535689 C7orf72A4D263 438 aa4.52□□□□□ -1.69
SNHG1-202ENST00000535689 GRK2P25098 689 aa4.52□□□□□ -1.69
SNHG1-202ENST00000535689 CNGA1P29973 690 aa4.52□□□□□ -1.69
SNHG1-202ENST00000535689 GRK3P35626 688 aa4.52□□□□□ -1.69
SNHG1-202ENST00000535689 NEK4P51957 841 aa4.52□□□□□ -1.69
SNHG1-202ENST00000535689 HNRNPMP52272 730 aaKnown RBP eCLIP4.52□□□□□ -1.69
SNHG1-202ENST00000535689 ANAPC15P60006 121 aa4.52□□□□□ -1.69
SNHG1-202ENST00000535689 SKIDA1Q1XH10 827 aa4.52□□□□□ -1.69
SNHG1-202ENST00000535689 ZNF792Q3KQV3 632 aa4.52□□□□□ -1.69
SNHG1-202ENST00000535689 HSF5Q4G112 596 aaPredicted RBP4.52□□□□□ -1.69
SNHG1-202ENST00000535689 DDX46Q7L014 1031 aaKnown RBP4.52□□□□□ -1.69
SNHG1-202ENST00000535689 C16orf59Q7L2K0 433 aa4.52□□□□□ -1.69
SNHG1-202ENST00000535689 KRT26Q7Z3Y9 468 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms