RNA–Protein interactions for RNA: ENST00000535452.5

CLSTN3-205, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-205ENST00000535452 VSIG10LQ86VR7 867 aa15.28■□□□□ 0.04
CLSTN3-205ENST00000535452 CDHR1Q96JP9 859 aa15.28■□□□□ 0.04
CLSTN3-205ENST00000535452 MTA3Q9BTC8 594 aa15.28■□□□□ 0.04
CLSTN3-205ENST00000535452 USP26Q9BXU7 913 aa15.28■□□□□ 0.04
CLSTN3-205ENST00000535452 RIOX1Q9H6W3 641 aa15.28■□□□□ 0.04
CLSTN3-205ENST00000535452 HDAC6Q9UBN7 1215 aa15.28■□□□□ 0.04
CLSTN3-205ENST00000535452 LCTP09848 1927 aa15.27■□□□□ 0.04
CLSTN3-205ENST00000535452 TNFRSF10AO00220 468 aa15.27■□□□□ 0.04
CLSTN3-205ENST00000535452 FIBPO43427 364 aa15.27■□□□□ 0.04
CLSTN3-205ENST00000535452 SORBS3O60504 671 aa15.27■□□□□ 0.04
CLSTN3-205ENST00000535452 AMHP03971 560 aa15.27■□□□□ 0.04
CLSTN3-205ENST00000535452 THPOP40225 353 aa15.27■□□□□ 0.04
CLSTN3-205ENST00000535452 GHRHRQ02643 423 aa15.27■□□□□ 0.04
CLSTN3-205ENST00000535452 MYSM1Q5VVJ2 828 aa15.27■□□□□ 0.04
CLSTN3-205ENST00000535452 XRRA1Q6P2D8 792 aa15.27■□□□□ 0.04
CLSTN3-205ENST00000535452 PPP1R13LQ8WUF5 828 aa15.27■□□□□ 0.04
CLSTN3-205ENST00000535452 TNPO1Q92973 898 aaKnown RBP15.27■□□□□ 0.04
CLSTN3-205ENST00000535452 ATP6V0A1Q93050 837 aa15.27■□□□□ 0.04
CLSTN3-205ENST00000535452 MTMR8Q96EF0 704 aa15.27■□□□□ 0.04
CLSTN3-205ENST00000535452 TMEM87BQ96K49 555 aa15.27■□□□□ 0.04
CLSTN3-205ENST00000535452 ASB2Q96Q27 587 aa15.27■□□□□ 0.04
CLSTN3-205ENST00000535452 MAP3K14Q99558 947 aa15.27■□□□□ 0.04
CLSTN3-205ENST00000535452 MYH6P13533 1939 aa15.27■□□□□ 0.03
CLSTN3-205ENST00000535452 SPDYE3A6NKU9 549 aa15.26■□□□□ 0.03
CLSTN3-205ENST00000535452 H3BRB1 525 aa15.26■□□□□ 0.03
CLSTN3-205ENST00000535452 SGSM2O43147 1006 aa15.26■□□□□ 0.03
CLSTN3-205ENST00000535452 CKBP12277 381 aa15.26■□□□□ 0.03
CLSTN3-205ENST00000535452 TUT1Q9H6E5 874 aaKnown RBP15.26■□□□□ 0.03
CLSTN3-205ENST00000535452 CERS4Q9HA82 394 aa15.26■□□□□ 0.03
CLSTN3-205ENST00000535452 RBM8AQ9Y5S9 174 aaKnown RBP15.26■□□□□ 0.03
CLSTN3-205ENST00000535452 SLC12A7Q9Y666 1083 aa15.26■□□□□ 0.03
CLSTN3-205ENST00000535452 COL6A3P12111 3177 aa15.25■□□□□ 0.03
CLSTN3-205ENST00000535452 MYOGP15173 224 aa15.25■□□□□ 0.03
CLSTN3-205ENST00000535452 UBA1P22314 1058 aaKnown RBP15.25■□□□□ 0.03
CLSTN3-205ENST00000535452 SMARCA1P28370 1054 aa15.25■□□□□ 0.03
CLSTN3-205ENST00000535452 IRX6P78412 446 aaPredicted RBP15.25■□□□□ 0.03
CLSTN3-205ENST00000535452 FGD1P98174 961 aa15.25■□□□□ 0.03
CLSTN3-205ENST00000535452 PTH1RQ03431 593 aa15.25■□□□□ 0.03
CLSTN3-205ENST00000535452 METTL7BQ6UX53 244 aa15.25■□□□□ 0.03
CLSTN3-205ENST00000535452 RSPH3Q86UC2 560 aa15.25■□□□□ 0.03
CLSTN3-205ENST00000535452 ZNF654Q8IZM8 581 aa15.25■□□□□ 0.03
CLSTN3-205ENST00000535452 USP38Q8NB14 1042 aa15.25■□□□□ 0.03
CLSTN3-205ENST00000535452 KAT2BQ92831 832 aa15.25■□□□□ 0.03
CLSTN3-205ENST00000535452 MAP4K1Q92918 833 aa15.25■□□□□ 0.03
CLSTN3-205ENST00000535452 ANO2Q9NQ90 1003 aa15.25■□□□□ 0.03
CLSTN3-205ENST00000535452 COG5Q9UP83 839 aa15.25■□□□□ 0.03
CLSTN3-205ENST00000535452 SCN10AQ9Y5Y9 1956 aa15.25■□□□□ 0.03
CLSTN3-205ENST00000535452 RSPH10B2B2RC85 870 aa15.24■□□□□ 0.03
CLSTN3-205ENST00000535452 PRC1O43663 620 aa15.24■□□□□ 0.03
CLSTN3-205ENST00000535452 CAND2O75155 1236 aa15.24■□□□□ 0.03
CLSTN3-205ENST00000535452 LGR5O75473 907 aa15.24■□□□□ 0.03
CLSTN3-205ENST00000535452 RSPH10BP0C881 870 aa15.24■□□□□ 0.03
CLSTN3-205ENST00000535452 PDE4AP27815 886 aa15.24■□□□□ 0.03
CLSTN3-205ENST00000535452 WDR5P61964 334 aaKnown RBP15.24■□□□□ 0.03
CLSTN3-205ENST00000535452 RBL2Q08999 1139 aa15.24■□□□□ 0.03
CLSTN3-205ENST00000535452 TROAPQ12815 778 aa15.24■□□□□ 0.03
CLSTN3-205ENST00000535452 HSDL1Q3SXM5 330 aa15.24■□□□□ 0.03
CLSTN3-205ENST00000535452 SEPT8Q92599 483 aa15.24■□□□□ 0.03
CLSTN3-205ENST00000535452 UHRF1Q96T88 793 aaPredicted RBP15.24■□□□□ 0.03
CLSTN3-205ENST00000535452 RAD9AQ99638 391 aa15.24■□□□□ 0.03
CLSTN3-205ENST00000535452 SPZ1Q9BXG8 430 aa15.24■□□□□ 0.03
CLSTN3-205ENST00000535452 RTEL1Q9NZ71 1219 aa15.24■□□□□ 0.03
CLSTN3-205ENST00000535452 PPP1R11O60927 126 aaPredicted RBP15.23■□□□□ 0.03
CLSTN3-205ENST00000535452 SP4Q02446 784 aa15.23■□□□□ 0.03
CLSTN3-205ENST00000535452 ADGRE1Q14246 886 aa15.23■□□□□ 0.03
CLSTN3-205ENST00000535452 ADAMTS19Q8TE59 1207 aa15.23■□□□□ 0.03
CLSTN3-205ENST00000535452 PSTPIP2Q9H939 334 aa15.23■□□□□ 0.03
CLSTN3-205ENST00000535452 INSL6Q9Y581 213 aa15.23■□□□□ 0.03
CLSTN3-205ENST00000535452 HAS3O00219 553 aa15.22■□□□□ 0.03
CLSTN3-205ENST00000535452 LGALS2P05162 132 aa15.22■□□□□ 0.03
CLSTN3-205ENST00000535452 RPLP2P05387 115 aaKnown RBP15.22■□□□□ 0.03
CLSTN3-205ENST00000535452 ZNF618Q5T7W0 954 aa15.22■□□□□ 0.03
CLSTN3-205ENST00000535452 UTP14CQ5TAP6 766 aaKnown RBP15.22■□□□□ 0.03
CLSTN3-205ENST00000535452 PCNX4Q63HM2 1172 aa15.22■□□□□ 0.03
CLSTN3-205ENST00000535452 CYFIP1Q7L576 1253 aa15.22■□□□□ 0.03
CLSTN3-205ENST00000535452 MYOCDQ8IZQ8 938 aa15.22■□□□□ 0.03
CLSTN3-205ENST00000535452 PRDM6Q9NQX0 595 aa15.22■□□□□ 0.03
CLSTN3-205ENST00000535452 TANC1Q9C0D5 1861 aa15.21■□□□□ 0.03
CLSTN3-205ENST00000535452 PIK3CDO00329 1044 aa15.21■□□□□ 0.03
CLSTN3-205ENST00000535452 OPLAHO14841 1288 aa15.21■□□□□ 0.03
CLSTN3-205ENST00000535452 GJB5O95377 273 aa15.21■□□□□ 0.03
CLSTN3-205ENST00000535452 CXCL10P02778 98 aa15.21■□□□□ 0.03
CLSTN3-205ENST00000535452 SMIM10L2AP0DMW4 78 aa15.21■□□□□ 0.03
CLSTN3-205ENST00000535452 SMIM10L2BP0DMW5 78 aa15.21■□□□□ 0.03
CLSTN3-205ENST00000535452 ICAM3P32942 547 aa15.21■□□□□ 0.03
CLSTN3-205ENST00000535452 LIFRP42702 1097 aa15.21■□□□□ 0.03
CLSTN3-205ENST00000535452 TAP1Q03518 808 aa15.21■□□□□ 0.03
CLSTN3-205ENST00000535452 PTPROQ16827 1216 aa15.21■□□□□ 0.03
CLSTN3-205ENST00000535452 FAM117BQ6P1L5 589 aa15.21■□□□□ 0.03
CLSTN3-205ENST00000535452 MB21D2Q8IYB1 491 aaPredicted RBP15.21■□□□□ 0.03
CLSTN3-205ENST00000535452 APBB2Q92870 758 aa15.21■□□□□ 0.03
CLSTN3-205ENST00000535452 GLG1Q92896 1179 aa15.21■□□□□ 0.03
CLSTN3-205ENST00000535452 HLA-CQ95604 372 aa15.21■□□□□ 0.03
CLSTN3-205ENST00000535452 INPP4AQ96PE3 977 aaPredicted RBP15.21■□□□□ 0.03
CLSTN3-205ENST00000535452 TGS1Q96RS0 853 aaKnown RBP15.21■□□□□ 0.03
CLSTN3-205ENST00000535452 YME1L1Q96TA2 773 aa15.21■□□□□ 0.03
CLSTN3-205ENST00000535452 SENP7Q9BQF6 1050 aa15.21■□□□□ 0.03
CLSTN3-205ENST00000535452 IL25Q9H293 177 aa15.21■□□□□ 0.03
CLSTN3-205ENST00000535452 AZI2Q9H6S1 392 aa15.21■□□□□ 0.03
CLSTN3-205ENST00000535452 RBM28Q9NW13 759 aaKnown RBP15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms