RNA–Protein interactions for RNA: ENST00000535094.6

MCF2L-232, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2L, Length 3,752 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-232ENST00000535094 ADAM9Q13443 819 aa17.47■□□□□ 0.39
MCF2L-232ENST00000535094 KIAA0895Q8NCT3 520 aa17.47■□□□□ 0.39
MCF2L-232ENST00000535094 CEP89Q96ST8 783 aa17.47■□□□□ 0.39
MCF2L-232ENST00000535094 KIAA1024Q9UPX6 916 aa17.47■□□□□ 0.39
MCF2L-232ENST00000535094 PCDHB13Q9Y5F0 798 aa17.47■□□□□ 0.39
MCF2L-232ENST00000535094 MEFVO15553 781 aaPredicted RBP17.47■□□□□ 0.39
MCF2L-232ENST00000535094 RAD51CO43502 376 aa17.47■□□□□ 0.39
MCF2L-232ENST00000535094 PPP1R37O75864 691 aa17.47■□□□□ 0.39
MCF2L-232ENST00000535094 ACTN1P12814 892 aa17.47■□□□□ 0.39
MCF2L-232ENST00000535094 GBP2P32456 591 aaPredicted RBP17.47■□□□□ 0.39
MCF2L-232ENST00000535094 C3orf67Q6ZVT6 689 aa17.47■□□□□ 0.39
MCF2L-232ENST00000535094 NLRP14Q86W24 1093 aa17.47■□□□□ 0.39
MCF2L-232ENST00000535094 CLEC10AQ8IUN9 316 aa17.47■□□□□ 0.39
MCF2L-232ENST00000535094 ZNF473Q8WTR7 871 aaKnown RBP17.47■□□□□ 0.39
MCF2L-232ENST00000535094 U2AF1L4Q8WU68 220 aaKnown RBP17.47■□□□□ 0.39
MCF2L-232ENST00000535094 PLS1Q14651 629 aa17.47■□□□□ 0.39
MCF2L-232ENST00000535094 MEA1Q16626 185 aa17.47■□□□□ 0.39
MCF2L-232ENST00000535094 MSL1Q68DK7 614 aa17.47■□□□□ 0.39
MCF2L-232ENST00000535094 ZNF287Q9HBT7 754 aa17.47■□□□□ 0.39
MCF2L-232ENST00000535094 MST1RQ04912 1400 aa17.46■□□□□ 0.39
MCF2L-232ENST00000535094 LOC102724428A0A0B4J2F2 783 aa17.46■□□□□ 0.39
MCF2L-232ENST00000535094 NPHP3-ACAD11A0A0J9YXS1 232 aa17.46■□□□□ 0.39
MCF2L-232ENST00000535094 SLC16A2P36021 539 aa17.46■□□□□ 0.39
MCF2L-232ENST00000535094 SIK1P57059 783 aa17.46■□□□□ 0.39
MCF2L-232ENST00000535094 NCAPGQ9BPX3 1015 aa17.46■□□□□ 0.39
MCF2L-232ENST00000535094 COL4A3BPQ9Y5P4 624 aa17.46■□□□□ 0.39
MCF2L-232ENST00000535094 FKBP3Q00688 224 aaKnown RBP17.46■□□□□ 0.39
MCF2L-232ENST00000535094 GPBP1Q86WP2 473 aa17.46■□□□□ 0.39
MCF2L-232ENST00000535094 MGARPQ8TDB4 240 aa17.46■□□□□ 0.39
MCF2L-232ENST00000535094 CASKIN2Q8WXE0 1202 aa17.46■□□□□ 0.39
MCF2L-232ENST00000535094 BARHL2Q9NY43 387 aa17.46■□□□□ 0.39
MCF2L-232ENST00000535094 MEIS1O00470 390 aa17.45■□□□□ 0.38
MCF2L-232ENST00000535094 CETN3O15182 167 aa17.45■□□□□ 0.38
MCF2L-232ENST00000535094 SETDB2Q96T68 719 aa17.45■□□□□ 0.38
MCF2L-232ENST00000535094 AMACRQ9UHK6 382 aa17.45■□□□□ 0.38
MCF2L-232ENST00000535094 DHX9Q08211 1270 aaKnown RBP17.45■□□□□ 0.38
MCF2L-232ENST00000535094 MKRN4PQ13434 485 aaPredicted RBP17.45■□□□□ 0.38
MCF2L-232ENST00000535094 MIIPQ5JXC2 388 aa17.45■□□□□ 0.38
MCF2L-232ENST00000535094 PDXDC1Q6P996 788 aa17.45■□□□□ 0.38
MCF2L-232ENST00000535094 TMED8Q6PL24 325 aaPredicted RBP17.45■□□□□ 0.38
MCF2L-232ENST00000535094 LRRC45Q96CN5 670 aa17.45■□□□□ 0.38
MCF2L-232ENST00000535094 A0A087X0T9 212 aa17.45■□□□□ 0.38
MCF2L-232ENST00000535094 FAM228BP0C875 321 aa17.45■□□□□ 0.38
MCF2L-232ENST00000535094 SLCO1A2P46721 670 aa17.45■□□□□ 0.38
MCF2L-232ENST00000535094 ADCY7P51828 1080 aa17.45■□□□□ 0.38
MCF2L-232ENST00000535094 ERGIC2Q96RQ1 377 aa17.45■□□□□ 0.38
MCF2L-232ENST00000535094 ANAPC4Q9UJX5 808 aa17.45■□□□□ 0.38
MCF2L-232ENST00000535094 E9PMD0 336 aa17.44■□□□□ 0.38
MCF2L-232ENST00000535094 PPP1R2P41236 205 aa17.44■□□□□ 0.38
MCF2L-232ENST00000535094 NAA25Q14CX7 972 aa17.44■□□□□ 0.38
MCF2L-232ENST00000535094 PPP1R7Q15435 360 aa17.44■□□□□ 0.38
MCF2L-232ENST00000535094 CCDC65Q8IXS2 484 aa17.44■□□□□ 0.38
MCF2L-232ENST00000535094 ATP6V1G3Q96LB4 118 aa17.44■□□□□ 0.38
MCF2L-232ENST00000535094 TSKSQ9UJT2 592 aa17.44■□□□□ 0.38
MCF2L-232ENST00000535094 PCDHA12Q9UN75 941 aa17.44■□□□□ 0.38
MCF2L-232ENST00000535094 N4BP2Q86UW6 1770 aaPredicted RBP17.44■□□□□ 0.38
MCF2L-232ENST00000535094 DAPK3O43293 454 aa17.44■□□□□ 0.38
MCF2L-232ENST00000535094 CYTH3O43739 400 aa17.44■□□□□ 0.38
MCF2L-232ENST00000535094 NKX1-1Q15270 411 aaPredicted RBP17.44■□□□□ 0.38
MCF2L-232ENST00000535094 KLHDC7AQ5VTJ3 777 aa17.44■□□□□ 0.38
MCF2L-232ENST00000535094 CACNA2D3Q8IZS8 1091 aa17.44■□□□□ 0.38
MCF2L-232ENST00000535094 RDH13Q8NBN7 331 aa17.44■□□□□ 0.38
MCF2L-232ENST00000535094 AK8Q96MA6 479 aa17.44■□□□□ 0.38
MCF2L-232ENST00000535094 ZNF76P36508 570 aa17.44■□□□□ 0.38
MCF2L-232ENST00000535094 MAGOHP61326 146 aaKnown RBP17.44■□□□□ 0.38
MCF2L-232ENST00000535094 CYP4A11Q02928 519 aa17.44■□□□□ 0.38
MCF2L-232ENST00000535094 MAGOHBQ96A72 148 aaKnown RBP17.44■□□□□ 0.38
MCF2L-232ENST00000535094 USP17L5A8MUK1 530 aa17.43■□□□□ 0.38
MCF2L-232ENST00000535094 PHF20L1A8MW92 1017 aa17.43■□□□□ 0.38
MCF2L-232ENST00000535094 STXBP3O00186 592 aa17.43■□□□□ 0.38
MCF2L-232ENST00000535094 CLTAP09496 248 aa17.43■□□□□ 0.38
MCF2L-232ENST00000535094 NR2F2P24468 414 aa17.43■□□□□ 0.38
MCF2L-232ENST00000535094 COPB2P35606 906 aa17.43■□□□□ 0.38
MCF2L-232ENST00000535094 TXNRD3Q86VQ6 643 aa17.43■□□□□ 0.38
MCF2L-232ENST00000535094 CUEDC2Q9H467 287 aa17.43■□□□□ 0.38
MCF2L-232ENST00000535094 ZNF233A6NK53 670 aa17.43■□□□□ 0.38
MCF2L-232ENST00000535094 RASSF10A6NK89 507 aa17.43■□□□□ 0.38
MCF2L-232ENST00000535094 CLIC2O15247 247 aa17.43■□□□□ 0.38
MCF2L-232ENST00000535094 SERPING1P05155 500 aa17.43■□□□□ 0.38
MCF2L-232ENST00000535094 MYL1P05976 194 aa17.43■□□□□ 0.38
MCF2L-232ENST00000535094 UNC13DQ70J99 1090 aa17.43■□□□□ 0.38
MCF2L-232ENST00000535094 DGKHQ86XP1 1220 aa17.43■□□□□ 0.38
MCF2L-232ENST00000535094 TCP11Q8WWU5 503 aa17.43■□□□□ 0.38
MCF2L-232ENST00000535094 NUDT12Q9BQG2 462 aa17.43■□□□□ 0.38
MCF2L-232ENST00000535094 PLCD4Q9BRC7 762 aa17.43■□□□□ 0.38
MCF2L-232ENST00000535094 EPN3Q9H201 632 aa17.43■□□□□ 0.38
MCF2L-232ENST00000535094 IL17RBQ9NRM6 502 aa17.43■□□□□ 0.38
MCF2L-232ENST00000535094 FBXL5Q9UKA1 691 aa17.43■□□□□ 0.38
MCF2L-232ENST00000535094 RGPD5Q99666 1765 aa17.43■□□□□ 0.38
MCF2L-232ENST00000535094 ORC4O43929 436 aa17.43■□□□□ 0.38
MCF2L-232ENST00000535094 CCDC172P0C7W6 258 aa17.43■□□□□ 0.38
MCF2L-232ENST00000535094 EZRP15311 586 aaKnown RBP17.43■□□□□ 0.38
MCF2L-232ENST00000535094 MDH1P40925 334 aaKnown RBP17.43■□□□□ 0.38
MCF2L-232ENST00000535094 RCSD1Q6JBY9 416 aa17.43■□□□□ 0.38
MCF2L-232ENST00000535094 RUFY4Q6ZNE9 571 aa17.43■□□□□ 0.38
MCF2L-232ENST00000535094 ZSCAN29Q8IWY8 852 aaPredicted RBP17.43■□□□□ 0.38
MCF2L-232ENST00000535094 CELF4Q9BZC1 486 aaKnown RBP17.43■□□□□ 0.38
MCF2L-232ENST00000535094 GGT7Q9UJ14 662 aa17.43■□□□□ 0.38
MCF2L-232ENST00000535094 C6orf229H3BNL8 230 aa17.42■□□□□ 0.38
MCF2L-232ENST00000535094 FECHP22830 423 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms