RNA–Protein interactions for RNA: ENST00000534401.5

PKP3-211, Transcript of plakophilin 3, humanhuman

TSL 3

Gene PKP3, Length 756 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-211ENST00000534401 PPTC7Q8NI37 304 aa24.48■■□□□ 1.51
PKP3-211ENST00000534401 CCDC12Q8WUD4 166 aaPredicted RBP24.48■■□□□ 1.51
PKP3-211ENST00000534401 CRYGNQ8WXF5 182 aa24.48■■□□□ 1.51
PKP3-211ENST00000534401 TRIM43Q96BQ3 446 aaPredicted RBP24.48■■□□□ 1.51
PKP3-211ENST00000534401 ZFP91Q96JP5 570 aaPredicted RBP24.48■■□□□ 1.51
PKP3-211ENST00000534401 SENP7Q9BQF6 1050 aa24.48■■□□□ 1.51
PKP3-211ENST00000534401 MTG1Q9BT17 334 aaPredicted RBP24.48■■□□□ 1.51
PKP3-211ENST00000534401 SLC26A6Q9BXS9 759 aa24.48■■□□□ 1.51
PKP3-211ENST00000534401 ADAMTS3O15072 1205 aa24.47■■□□□ 1.51
PKP3-211ENST00000534401 FIBPO43427 364 aa24.47■■□□□ 1.51
PKP3-211ENST00000534401 CLTBP09497 229 aa24.47■■□□□ 1.51
PKP3-211ENST00000534401 UBA1P22314 1058 aaKnown RBP24.47■■□□□ 1.51
PKP3-211ENST00000534401 MAGEA10P43363 369 aaPredicted RBP24.47■■□□□ 1.51
PKP3-211ENST00000534401 RBM25P49756 843 aaKnown RBP24.47■■□□□ 1.51
PKP3-211ENST00000534401 NEK4P51957 841 aa24.47■■□□□ 1.51
PKP3-211ENST00000534401 MCTP2Q6DN12 878 aa24.47■■□□□ 1.51
PKP3-211ENST00000534401 CHRDL2Q6WN34 429 aa24.47■■□□□ 1.51
PKP3-211ENST00000534401 GPRASP2Q96D09 838 aa24.47■■□□□ 1.51
PKP3-211ENST00000534401 TBX21Q9UL17 535 aa24.47■■□□□ 1.51
PKP3-211ENST00000534401 DCDC2CA8MYV0 355 aa24.46■■□□□ 1.51
PKP3-211ENST00000534401 ITGB5P18084 799 aa24.46■■□□□ 1.51
PKP3-211ENST00000534401 SREBF1P36956 1147 aa24.46■■□□□ 1.51
PKP3-211ENST00000534401 AKAP17AQ02040 695 aaKnown RBP24.46■■□□□ 1.51
PKP3-211ENST00000534401 SSRP1Q08945 709 aaKnown RBP24.46■■□□□ 1.51
PKP3-211ENST00000534401 DHX37Q8IY37 1157 aaKnown RBP24.46■■□□□ 1.51
PKP3-211ENST00000534401 VTI1AQ96AJ9 217 aa24.46■■□□□ 1.51
PKP3-211ENST00000534401 RTEL1Q9NZ71 1219 aa24.46■■□□□ 1.51
PKP3-211ENST00000534401 A0A1W2PPC1 479 aa24.45■■□□□ 1.5
PKP3-211ENST00000534401 MAFGO15525 162 aa24.45■■□□□ 1.5
PKP3-211ENST00000534401 PQBP1O60828 265 aaKnown RBP24.45■■□□□ 1.5
PKP3-211ENST00000534401 PPFIA4O75335 1185 aa24.45■■□□□ 1.5
PKP3-211ENST00000534401 DEXIO95424 95 aa24.45■■□□□ 1.5
PKP3-211ENST00000534401 GGPS1O95749 300 aa24.45■■□□□ 1.5
PKP3-211ENST00000534401 MYL3P08590 195 aa24.45■■□□□ 1.5
PKP3-211ENST00000534401 STK3Q13188 491 aa24.45■■□□□ 1.5
PKP3-211ENST00000534401 CPLX2Q6PUV4 134 aaKnown RBP24.45■■□□□ 1.5
PKP3-211ENST00000534401 TRIM22Q8IYM9 498 aa24.45■■□□□ 1.5
PKP3-211ENST00000534401 KAT2BQ92831 832 aa24.45■■□□□ 1.5
PKP3-211ENST00000534401 ANO3Q9BYT9 981 aa24.45■■□□□ 1.5
PKP3-211ENST00000534401 SLKQ9H2G2 1235 aaPredicted RBP24.45■■□□□ 1.5
PKP3-211ENST00000534401 BCAS3Q9H6U6 928 aa24.45■■□□□ 1.5
PKP3-211ENST00000534401 EHMT1Q9H9B1 1298 aa24.45■■□□□ 1.5
PKP3-211ENST00000534401 C6orf50Q9HD87 102 aa24.45■■□□□ 1.5
PKP3-211ENST00000534401 DOCK5Q9H7D0 1870 aa24.45■■□□□ 1.5
PKP3-211ENST00000534401 CPLX1O14810 134 aa24.44■■□□□ 1.5
PKP3-211ENST00000534401 CTDNEP1O95476 244 aa24.44■■□□□ 1.5
PKP3-211ENST00000534401 GNA11P29992 359 aa24.44■■□□□ 1.5
PKP3-211ENST00000534401 PSMC6P62333 389 aa24.44■■□□□ 1.5
PKP3-211ENST00000534401 NEDD9Q14511 834 aa24.44■■□□□ 1.5
PKP3-211ENST00000534401 ME3Q16798 604 aa24.44■■□□□ 1.5
PKP3-211ENST00000534401 HSDL1Q3SXM5 330 aa24.44■■□□□ 1.5
PKP3-211ENST00000534401 HABP4Q5JVS0 413 aaKnown RBP24.44■■□□□ 1.5
PKP3-211ENST00000534401 NLRX1Q86UT6 975 aa24.44■■□□□ 1.5
PKP3-211ENST00000534401 JADE2Q9NQC1 790 aa24.44■■□□□ 1.5
PKP3-211ENST00000534401 TMEM260Q9NX78 707 aa24.44■■□□□ 1.5
PKP3-211ENST00000534401 STK36Q9NRP7 1315 aa24.43■■□□□ 1.5
PKP3-211ENST00000534401 HAS3O00219 553 aa24.43■■□□□ 1.5
PKP3-211ENST00000534401 PPFIA3O75145 1194 aa24.43■■□□□ 1.5
PKP3-211ENST00000534401 CYP3A4P08684 503 aa24.43■■□□□ 1.5
PKP3-211ENST00000534401 ITGB8P26012 769 aa24.43■■□□□ 1.5
PKP3-211ENST00000534401 PTPN11Q06124 597 aaPredicted RBP24.43■■□□□ 1.5
PKP3-211ENST00000534401 DGKDQ16760 1214 aa24.43■■□□□ 1.5
PKP3-211ENST00000534401 NFRKBQ6P4R8 1299 aa24.43■■□□□ 1.5
PKP3-211ENST00000534401 METTL7BQ6UX53 244 aa24.43■■□□□ 1.5
PKP3-211ENST00000534401 CCDC148Q8NFR7 591 aa24.43■■□□□ 1.5
PKP3-211ENST00000534401 CDHR1Q96JP9 859 aa24.43■■□□□ 1.5
PKP3-211ENST00000534401 MXRA8Q9BRK3 442 aa24.43■■□□□ 1.5
PKP3-211ENST00000534401 LARGE1O95461 756 aa24.42■■□□□ 1.5
PKP3-211ENST00000534401 KCNA2P16389 499 aa24.42■■□□□ 1.5
PKP3-211ENST00000534401 NPY5RQ15761 445 aa24.42■■□□□ 1.5
PKP3-211ENST00000534401 NBPF20Q3BBV1 942 aa24.42■■□□□ 1.5
PKP3-211ENST00000534401 SESTD1Q86VW0 696 aa24.42■■□□□ 1.5
PKP3-211ENST00000534401 C22orf23Q9BZE7 217 aa24.42■■□□□ 1.5
PKP3-211ENST00000534401 VPS54Q9P1Q0 977 aa24.42■■□□□ 1.5
PKP3-211ENST00000534401 PRKAG2Q9UGJ0 569 aa24.42■■□□□ 1.5
PKP3-211ENST00000534401 MEIS1O00470 390 aa24.41■■□□□ 1.5
PKP3-211ENST00000534401 ATP9AO75110 1047 aa24.41■■□□□ 1.5
PKP3-211ENST00000534401 CDKL5O76039 1030 aa24.41■■□□□ 1.5
PKP3-211ENST00000534401 F2P00734 622 aa24.41■■□□□ 1.5
PKP3-211ENST00000534401 NIPA1Q7RTP0 329 aa24.41■■□□□ 1.5
PKP3-211ENST00000534401 REXO1Q8N1G1 1221 aaKnown RBP24.41■■□□□ 1.5
PKP3-211ENST00000534401 GIMAP8Q8ND71 665 aaPredicted RBP24.41■■□□□ 1.5
PKP3-211ENST00000534401 BICD2Q8TD16 824 aa24.41■■□□□ 1.5
PKP3-211ENST00000534401 GTF3C6Q969F1 213 aa24.41■■□□□ 1.5
PKP3-211ENST00000534401 PGBD1Q96JS3 809 aa24.41■■□□□ 1.5
PKP3-211ENST00000534401 SPATA33Q96N06 139 aa24.41■■□□□ 1.5
PKP3-211ENST00000534401 TMEM39AQ9NV64 488 aa24.41■■□□□ 1.5
PKP3-211ENST00000534401 M0R2N6 131 aa24.4■■□□□ 1.5
PKP3-211ENST00000534401 TLR3O15455 904 aaKnown RBP24.4■■□□□ 1.5
PKP3-211ENST00000534401 EDIL3O43854 480 aa24.4■■□□□ 1.5
PKP3-211ENST00000534401 ARHGAP4P98171 946 aa24.4■■□□□ 1.5
PKP3-211ENST00000534401 CEP55Q53EZ4 464 aa24.4■■□□□ 1.5
PKP3-211ENST00000534401 JAKMIP3Q5VZ66 844 aa24.4■■□□□ 1.5
PKP3-211ENST00000534401 DAGLBQ8NCG7 672 aa24.4■■□□□ 1.5
PKP3-211ENST00000534401 C16orf70Q9BSU1 422 aa24.4■■□□□ 1.5
PKP3-211ENST00000534401 MLXIPQ9HAP2 919 aa24.4■■□□□ 1.5
PKP3-211ENST00000534401 B4GALT4O60513 344 aa24.39■■□□□ 1.49
PKP3-211ENST00000534401 TIMP1P01033 207 aa24.39■■□□□ 1.49
PKP3-211ENST00000534401 MDM2Q00987 491 aaPredicted RBP24.39■■□□□ 1.49
PKP3-211ENST00000534401 CYFIP1Q7L576 1253 aa24.39■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms