RNA–Protein interactions for RNA: ENST00000533776.1

BRCA2-205, Transcript of BRCA2, DNA repair associated, human

TSL 3

Gene BRCA2, Length 523 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BRCA2-205	ENST00000533776	NKX3-2	P78367	333 aa		4.97	□□□□□ -1.61
BRCA2-205	ENST00000533776	KIAA2012	Q0VF49	1180 aa		4.97	□□□□□ -1.61
BRCA2-205	ENST00000533776	ADAM9	Q13443	819 aa		4.97	□□□□□ -1.61
BRCA2-205	ENST00000533776	TNNI3K	Q59H18	835 aa		4.97	□□□□□ -1.61
BRCA2-205	ENST00000533776	PRR31	Q5SQ13	230 aa		4.97	□□□□□ -1.61
BRCA2-205	ENST00000533776	PRAMEF18	Q5VWM3	479 aa		4.97	□□□□□ -1.61
BRCA2-205	ENST00000533776	MRM1	Q6IN84	353 aa	Known RBP	4.97	□□□□□ -1.61
BRCA2-205	ENST00000533776	BORA	Q6PGQ7	559 aa		4.97	□□□□□ -1.61
BRCA2-205	ENST00000533776	FAM124A	Q86V42	546 aa		4.97	□□□□□ -1.61
BRCA2-205	ENST00000533776	C8orf49	Q96NF6	230 aa		4.97	□□□□□ -1.61
BRCA2-205	ENST00000533776	ZNF652	Q9Y2D9	606 aa		4.97	□□□□□ -1.61
BRCA2-205	ENST00000533776	PCDHA2	Q9Y5H9	948 aa		4.97	□□□□□ -1.61
BRCA2-205	ENST00000533776	ZNF536	O15090	1300 aa		4.97	□□□□□ -1.61
BRCA2-205	ENST00000533776	CP	P00450	1065 aa		4.96	□□□□□ -1.62
BRCA2-205	ENST00000533776	SCG5	P05408	212 aa		4.96	□□□□□ -1.62
BRCA2-205	ENST00000533776	LTBR	P36941	435 aa		4.96	□□□□□ -1.62
BRCA2-205	ENST00000533776	ACBD5	Q5T8D3	534 aa	Predicted RBP	4.96	□□□□□ -1.62
BRCA2-205	ENST00000533776	TMEM145	Q8NBT3	493 aa		4.96	□□□□□ -1.62
BRCA2-205	ENST00000533776	ARRDC4	Q8NCT1	418 aa		4.96	□□□□□ -1.62
BRCA2-205	ENST00000533776	MICAL1	Q8TDZ2	1067 aa		4.96	□□□□□ -1.62
BRCA2-205	ENST00000533776	NGRN	Q9NPE2	291 aa	Known RBP	4.96	□□□□□ -1.62
BRCA2-205	ENST00000533776	CLDND1	Q9NY35	253 aa		4.96	□□□□□ -1.62
BRCA2-205	ENST00000533776	PCDHB4	Q9Y5E5	795 aa		4.96	□□□□□ -1.62
BRCA2-205	ENST00000533776	TCRBV5S2	A0A599	114 aa		4.95	□□□□□ -1.62
BRCA2-205	ENST00000533776		H7BY64	318 aa		4.95	□□□□□ -1.62
BRCA2-205	ENST00000533776	HGS	O14964	777 aa	Predicted RBP	4.95	□□□□□ -1.62
BRCA2-205	ENST00000533776	ETFB	P38117	255 aa		4.95	□□□□□ -1.62
BRCA2-205	ENST00000533776	HMGA2	P52926	109 aa		4.95	□□□□□ -1.62
BRCA2-205	ENST00000533776	GFRA1	P56159	465 aa		4.95	□□□□□ -1.62
BRCA2-205	ENST00000533776	LSAMP	Q13449	338 aa		4.95	□□□□□ -1.62
BRCA2-205	ENST00000533776	CHRNA2	Q15822	529 aa		4.95	□□□□□ -1.62
BRCA2-205	ENST00000533776	STEAP3	Q658P3	488 aa		4.95	□□□□□ -1.62
BRCA2-205	ENST00000533776	DENND5A	Q6IQ26	1287 aa		4.95	□□□□□ -1.62
BRCA2-205	ENST00000533776	VPS37D	Q86XT2	251 aa		4.95	□□□□□ -1.62
BRCA2-205	ENST00000533776	TOE1	Q96GM8	510 aa	Known RBP	4.95	□□□□□ -1.62
BRCA2-205	ENST00000533776	LCOR	Q96JN0	433 aa	Predicted RBP	4.95	□□□□□ -1.62
BRCA2-205	ENST00000533776	SAMD11	Q96NU1	681 aa		4.95	□□□□□ -1.62
BRCA2-205	ENST00000533776	KRTAP3-1	Q9BYR8	98 aa		4.95	□□□□□ -1.62
BRCA2-205	ENST00000533776	DTL	Q9NZJ0	730 aa		4.95	□□□□□ -1.62
BRCA2-205	ENST00000533776	PRKAG3	Q9UGI9	489 aa		4.95	□□□□□ -1.62
BRCA2-205	ENST00000533776	CROT	Q9UKG9	612 aa		4.95	□□□□□ -1.62
BRCA2-205	ENST00000533776	CYP1A1	P04798	512 aa	Predicted RBP	4.94	□□□□□ -1.62
BRCA2-205	ENST00000533776	ZNF20	P17024	532 aa		4.94	□□□□□ -1.62
BRCA2-205	ENST00000533776	ZNF28	P17035	718 aa		4.94	□□□□□ -1.62
BRCA2-205	ENST00000533776	ERCC5	P28715	1186 aa	Predicted RBP	4.94	□□□□□ -1.62
BRCA2-205	ENST00000533776	FXN	Q16595	210 aa		4.94	□□□□□ -1.62
BRCA2-205	ENST00000533776	CPZ	Q66K79	652 aa		4.94	□□□□□ -1.62
BRCA2-205	ENST00000533776	GLB1L	Q6UWU2	654 aa		4.94	□□□□□ -1.62
BRCA2-205	ENST00000533776	LIMS2	Q7Z4I7	341 aa		4.94	□□□□□ -1.62
BRCA2-205	ENST00000533776	CHST13	Q8NET6	341 aa		4.94	□□□□□ -1.62
BRCA2-205	ENST00000533776	L2HGDH	Q9H9P8	463 aa		4.94	□□□□□ -1.62
BRCA2-205	ENST00000533776	ST6GALNAC2	Q9UJ37	374 aa		4.94	□□□□□ -1.62
BRCA2-205	ENST00000533776	MATN3	O15232	486 aa		4.93	□□□□□ -1.62
BRCA2-205	ENST00000533776	B4GALT3	O60512	393 aa		4.93	□□□□□ -1.62
BRCA2-205	ENST00000533776	DGKI	O75912	1065 aa		4.93	□□□□□ -1.62
BRCA2-205	ENST00000533776	FSHB	P01225	129 aa		4.93	□□□□□ -1.62
BRCA2-205	ENST00000533776	TESK1	Q15569	626 aa		4.93	□□□□□ -1.62
BRCA2-205	ENST00000533776	EMC4	Q5J8M3	183 aa		4.93	□□□□□ -1.62
BRCA2-205	ENST00000533776	TEPP	Q6URK8	271 aa		4.93	□□□□□ -1.62
BRCA2-205	ENST00000533776	TMC5	Q6UXY8	1006 aa		4.93	□□□□□ -1.62
BRCA2-205	ENST00000533776	TTC9B	Q8N6N2	239 aa		4.93	□□□□□ -1.62
BRCA2-205	ENST00000533776	C1orf159	Q96HA4	380 aa		4.93	□□□□□ -1.62
BRCA2-205	ENST00000533776	CCDC140	Q96MF4	163 aa		4.93	□□□□□ -1.62
BRCA2-205	ENST00000533776	CLIC6	Q96NY7	704 aa		4.93	□□□□□ -1.62
BRCA2-205	ENST00000533776	BUD13	Q9BRD0	619 aa	Known RBP eCLIP	4.93	□□□□□ -1.62
BRCA2-205	ENST00000533776	EPB41L1	Q9H4G0	881 aa		4.93	□□□□□ -1.62
BRCA2-205	ENST00000533776	MYOT	Q9UBF9	498 aa		4.93	□□□□□ -1.62
BRCA2-205	ENST00000533776	C9orf118	A6NHY6	69 aa		4.92	□□□□□ -1.62
BRCA2-205	ENST00000533776	LAMTOR5	O43504	91 aa		4.92	□□□□□ -1.62
BRCA2-205	ENST00000533776	TADA3	O75528	432 aa		4.92	□□□□□ -1.62
BRCA2-205	ENST00000533776	GJB6	O95452	261 aa		4.92	□□□□□ -1.62
BRCA2-205	ENST00000533776	LRG1	P02750	347 aa		4.92	□□□□□ -1.62
BRCA2-205	ENST00000533776	IL13	P35225	146 aa		4.92	□□□□□ -1.62
BRCA2-205	ENST00000533776	GRIA2	P42262	883 aa		4.92	□□□□□ -1.62
BRCA2-205	ENST00000533776	MLLT6	P55198	1093 aa	Predicted RBP	4.92	□□□□□ -1.62
BRCA2-205	ENST00000533776	SLC10A6	Q3KNW5	377 aa		4.92	□□□□□ -1.62
BRCA2-205	ENST00000533776	SLC35F1	Q5T1Q4	408 aa		4.92	□□□□□ -1.62
BRCA2-205	ENST00000533776	PPIL4	Q8WUA2	492 aa	Known RBP eCLIP	4.92	□□□□□ -1.62
BRCA2-205	ENST00000533776	ZCCHC14	Q8WYQ9	949 aa	Known RBP	4.92	□□□□□ -1.62
BRCA2-205	ENST00000533776	YTHDC1	Q96MU7	727 aa	Known RBP	4.92	□□□□□ -1.62
BRCA2-205	ENST00000533776	SSBP3	Q9BWW4	388 aa	Predicted RBP	4.92	□□□□□ -1.62
BRCA2-205	ENST00000533776	TMEM168	Q9H0V1	697 aa		4.92	□□□□□ -1.62
BRCA2-205	ENST00000533776	RBPJL	Q9UBG7	517 aa		4.92	□□□□□ -1.62
BRCA2-205	ENST00000533776	PPARGC1A	Q9UBK2	798 aa	Known RBP	4.92	□□□□□ -1.62
BRCA2-205	ENST00000533776	AGRP	O00253	132 aa		4.91	□□□□□ -1.62
BRCA2-205	ENST00000533776	PPP2R2A	P63151	447 aa		4.91	□□□□□ -1.62
BRCA2-205	ENST00000533776	SURF1	Q15526	300 aa		4.91	□□□□□ -1.62
BRCA2-205	ENST00000533776	TRMT10B	Q6PF06	316 aa	Known RBP	4.91	□□□□□ -1.62
BRCA2-205	ENST00000533776	EEPD1	Q7L9B9	569 aa		4.91	□□□□□ -1.62
BRCA2-205	ENST00000533776	PLEKHH3	Q7Z736	793 aa		4.91	□□□□□ -1.62
BRCA2-205	ENST00000533776	KCTD13	Q8WZ19	329 aa		4.91	□□□□□ -1.62
BRCA2-205	ENST00000533776	SLITRK6	Q9H5Y7	841 aa		4.91	□□□□□ -1.62
BRCA2-205	ENST00000533776	ZNF408	Q9H9D4	720 aa		4.91	□□□□□ -1.62
BRCA2-205	ENST00000533776	WASF3	Q9UPY6	502 aa		4.91	□□□□□ -1.62
BRCA2-205	ENST00000533776	MSC	O60682	206 aa		4.9	□□□□□ -1.63
BRCA2-205	ENST00000533776	FGR	P09769	529 aa		4.9	□□□□□ -1.63
BRCA2-205	ENST00000533776	GRIN1	Q05586	938 aa		4.9	□□□□□ -1.63
BRCA2-205	ENST00000533776	GNL2	Q13823	731 aa	Known RBP	4.9	□□□□□ -1.63
BRCA2-205	ENST00000533776	PHF19	Q5T6S3	580 aa		4.9	□□□□□ -1.63
BRCA2-205	ENST00000533776	USP53	Q70EK8	1073 aa		4.9	□□□□□ -1.63

Retrieved 100 of 20,778 RNA–protein pairs in 483.5 ms