RNA–Protein interactions for RNA: ENST00000533674.1

BEST3-207, Transcript of bestrophin 3, humanhuman

TSL 3

Gene BEST3, Length 670 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-207ENST00000533674 PTPN11Q06124 597 aaPredicted RBP10.6□□□□□ -0.71
BEST3-207ENST00000533674 PTGISQ16647 500 aa10.6□□□□□ -0.71
BEST3-207ENST00000533674 KRT40Q6A162 431 aa10.6□□□□□ -0.71
BEST3-207ENST00000533674 TTBK2Q6IQ55 1244 aa10.6□□□□□ -0.71
BEST3-207ENST00000533674 INCENPQ9NQS7 918 aa10.6□□□□□ -0.71
BEST3-207ENST00000533674 MUC3AQ02505 3323 aa10.6□□□□□ -0.71
BEST3-207ENST00000533674 CHD9Q3L8U1 2897 aa10.59□□□□□ -0.71
BEST3-207ENST00000533674 RBM47A0AV96 593 aaKnown RBP10.59□□□□□ -0.71
BEST3-207ENST00000533674 EPOPA6NHQ4 379 aa10.59□□□□□ -0.71
BEST3-207ENST00000533674 RPS6P62753 249 aaKnown RBP10.59□□□□□ -0.71
BEST3-207ENST00000533674 GRB10Q13322 594 aa10.59□□□□□ -0.71
BEST3-207ENST00000533674 USH1GQ495M9 461 aa10.59□□□□□ -0.71
BEST3-207ENST00000533674 TMEM31Q5JXX7 168 aa10.59□□□□□ -0.71
BEST3-207ENST00000533674 DIEXFQ68CQ4 756 aaKnown RBP10.59□□□□□ -0.71
BEST3-207ENST00000533674 CHST3Q7LGC8 479 aa10.59□□□□□ -0.71
BEST3-207ENST00000533674 DNERQ8NFT8 737 aa10.59□□□□□ -0.71
BEST3-207ENST00000533674 CAGE1Q8TC20 777 aa10.59□□□□□ -0.71
BEST3-207ENST00000533674 COPS5Q92905 334 aa10.59□□□□□ -0.71
BEST3-207ENST00000533674 TMEM47Q9BQJ4 181 aa10.59□□□□□ -0.71
BEST3-207ENST00000533674 MTUS1Q9ULD2 1270 aa10.59□□□□□ -0.71
BEST3-207ENST00000533674 COL4A4P53420 1690 aaPredicted RBP10.59□□□□□ -0.71
BEST3-207ENST00000533674 A6NJR5 290 aa10.58□□□□□ -0.72
BEST3-207ENST00000533674 ORC4O43929 436 aa10.58□□□□□ -0.72
BEST3-207ENST00000533674 POU3F3P20264 500 aaPredicted RBP10.58□□□□□ -0.72
BEST3-207ENST00000533674 BTNL9Q6UXG8 535 aa10.58□□□□□ -0.72
BEST3-207ENST00000533674 SEPT14Q6ZU15 432 aa10.58□□□□□ -0.72
BEST3-207ENST00000533674 C7orf31Q8N865 590 aa10.58□□□□□ -0.72
BEST3-207ENST00000533674 PI4K2BQ8TCG2 481 aa10.58□□□□□ -0.72
BEST3-207ENST00000533674 AFAP1L1Q8TED9 768 aa10.58□□□□□ -0.72
BEST3-207ENST00000533674 GDPD5Q8WTR4 605 aa10.58□□□□□ -0.72
BEST3-207ENST00000533674 VWCEQ96DN2 955 aa10.58□□□□□ -0.72
BEST3-207ENST00000533674 ANAPC4Q9UJX5 808 aa10.58□□□□□ -0.72
BEST3-207ENST00000533674 DHX16O60231 1041 aaKnown RBP10.57□□□□□ -0.72
BEST3-207ENST00000533674 PARNO95453 639 aaKnown RBP10.57□□□□□ -0.72
BEST3-207ENST00000533674 GH1P01241 217 aa10.57□□□□□ -0.72
BEST3-207ENST00000533674 PDHBP11177 359 aa10.57□□□□□ -0.72
BEST3-207ENST00000533674 SELPP16109 830 aa10.57□□□□□ -0.72
BEST3-207ENST00000533674 CASTP20810 708 aaKnown RBP10.57□□□□□ -0.72
BEST3-207ENST00000533674 WDR5P61964 334 aaKnown RBP10.57□□□□□ -0.72
BEST3-207ENST00000533674 VPS53Q5VIR6 699 aa10.57□□□□□ -0.72
BEST3-207ENST00000533674 LRRC8DQ7L1W4 858 aa10.57□□□□□ -0.72
BEST3-207ENST00000533674 OTUD7AQ8TE49 926 aaPredicted RBP10.57□□□□□ -0.72
BEST3-207ENST00000533674 CLEC4DQ8WXI8 215 aa10.57□□□□□ -0.72
BEST3-207ENST00000533674 EVI5LQ96CN4 794 aa10.57□□□□□ -0.72
BEST3-207ENST00000533674 LRFN3Q9BTN0 628 aa10.57□□□□□ -0.72
BEST3-207ENST00000533674 EPHX3Q9H6B9 360 aa10.57□□□□□ -0.72
BEST3-207ENST00000533674 HELLSQ9NRZ9 838 aa10.57□□□□□ -0.72
BEST3-207ENST00000533674 WDR19Q8NEZ3 1342 aa10.57□□□□□ -0.72
BEST3-207ENST00000533674 MMP3P08254 477 aa10.56□□□□□ -0.72
BEST3-207ENST00000533674 SSTR3P32745 418 aaPredicted RBP10.56□□□□□ -0.72
BEST3-207ENST00000533674 HAND2P61296 217 aa10.56□□□□□ -0.72
BEST3-207ENST00000533674 ZNF543Q08ER8 600 aa10.56□□□□□ -0.72
BEST3-207ENST00000533674 IKBKEQ14164 716 aa10.56□□□□□ -0.72
BEST3-207ENST00000533674 DGKDQ16760 1214 aa10.56□□□□□ -0.72
BEST3-207ENST00000533674 GPATCH4Q5T3I0 446 aaKnown RBP10.56□□□□□ -0.72
BEST3-207ENST00000533674 FAM117BQ6P1L5 589 aa10.56□□□□□ -0.72
BEST3-207ENST00000533674 CNKSR3Q6P9H4 555 aa10.56□□□□□ -0.72
BEST3-207ENST00000533674 MFSD6Q6ZSS7 791 aa10.56□□□□□ -0.72
BEST3-207ENST00000533674 TMCO2Q7Z6W1 182 aaPredicted RBP10.56□□□□□ -0.72
BEST3-207ENST00000533674 AFG1LQ8WV93 481 aa10.56□□□□□ -0.72
BEST3-207ENST00000533674 TGS1Q96RS0 853 aaKnown RBP10.56□□□□□ -0.72
BEST3-207ENST00000533674 ALG1Q9BT22 464 aa10.56□□□□□ -0.72
BEST3-207ENST00000533674 KATNAL1Q9BW62 490 aa10.56□□□□□ -0.72
BEST3-207ENST00000533674 MYO9BQ13459 2157 aa10.56□□□□□ -0.72
BEST3-207ENST00000533674 SCN10AQ9Y5Y9 1956 aa10.56□□□□□ -0.72
BEST3-207ENST00000533674 ABHD14A-ACY1A0A1B0GW23 586 aa10.55□□□□□ -0.72
BEST3-207ENST00000533674 LCHNA4D1U4 455 aa10.55□□□□□ -0.72
BEST3-207ENST00000533674 FAM86C2PA6NEL3 165 aa10.55□□□□□ -0.72
BEST3-207ENST00000533674 FOXP2O15409 715 aa10.55□□□□□ -0.72
BEST3-207ENST00000533674 EFCAB14O75071 495 aa10.55□□□□□ -0.72
BEST3-207ENST00000533674 ARHGEF15O94989 841 aa10.55□□□□□ -0.72
BEST3-207ENST00000533674 CFHP08603 1231 aa10.55□□□□□ -0.72
BEST3-207ENST00000533674 GOLGA8HP0CJ92 632 aa10.55□□□□□ -0.72
BEST3-207ENST00000533674 EDNRBP24530 442 aa10.55□□□□□ -0.72
BEST3-207ENST00000533674 STXBP2Q15833 593 aa10.55□□□□□ -0.72
BEST3-207ENST00000533674 CDC37Q16543 378 aaPredicted RBP10.55□□□□□ -0.72
BEST3-207ENST00000533674 LY6KQ17RY6 165 aa10.55□□□□□ -0.72
BEST3-207ENST00000533674 KMT5BQ4FZB7 885 aa10.55□□□□□ -0.72
BEST3-207ENST00000533674 ARHGEF16Q5VV41 709 aa10.55□□□□□ -0.72
BEST3-207ENST00000533674 GDF6Q6KF10 455 aaPredicted RBP10.55□□□□□ -0.72
BEST3-207ENST00000533674 MCF2L2Q86YR7 1114 aa10.55□□□□□ -0.72
BEST3-207ENST00000533674 DHX37Q8IY37 1157 aaKnown RBP10.55□□□□□ -0.72
BEST3-207ENST00000533674 NSUN6Q8TEA1 469 aaKnown RBP10.55□□□□□ -0.72
BEST3-207ENST00000533674 ZNF516Q92618 1163 aa10.55□□□□□ -0.72
BEST3-207ENST00000533674 TTC14Q96N46 770 aa10.55□□□□□ -0.72
BEST3-207ENST00000533674 RAD9AQ99638 391 aa10.55□□□□□ -0.72
BEST3-207ENST00000533674 RNF41Q9H4P4 317 aaPredicted RBP10.55□□□□□ -0.72
BEST3-207ENST00000533674 TCP11L1Q9NUJ3 509 aa10.55□□□□□ -0.72
BEST3-207ENST00000533674 LMCD1Q9NZU5 365 aa10.55□□□□□ -0.72
BEST3-207ENST00000533674 PCDHB3Q9Y5E6 796 aa10.55□□□□□ -0.72
BEST3-207ENST00000533674 ABCB11O95342 1321 aa10.55□□□□□ -0.72
BEST3-207ENST00000533674 CHD7Q9P2D1 2997 aa10.54□□□□□ -0.72
BEST3-207ENST00000533674 ACTN4O43707 911 aaKnown RBP10.54□□□□□ -0.72
BEST3-207ENST00000533674 ARIH2O95376 493 aa10.54□□□□□ -0.72
BEST3-207ENST00000533674 FGAP02671 866 aa10.54□□□□□ -0.72
BEST3-207ENST00000533674 CKBP12277 381 aa10.54□□□□□ -0.72
BEST3-207ENST00000533674 NOVP48745 357 aa10.54□□□□□ -0.72
BEST3-207ENST00000533674 MFAP1P55081 439 aaKnown RBP10.54□□□□□ -0.72
BEST3-207ENST00000533674 COPS2P61201 443 aa10.54□□□□□ -0.72
BEST3-207ENST00000533674 DEFB103AP81534 67 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms