RNA–Protein interactions for RNA: ENST00000533464.5

PHRF1-205, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-205ENST00000533464 RSAD2Q8WXG1 361 aa19.17■□□□□ 0.66
PHRF1-205ENST00000533464 CEP170P1Q96L14 293 aa19.17■□□□□ 0.66
PHRF1-205ENST00000533464 ACCSQ96QU6 501 aa19.17■□□□□ 0.66
PHRF1-205ENST00000533464 BHMT2Q9H2M3 363 aa19.17■□□□□ 0.66
PHRF1-205ENST00000533464 MAP7D1Q3KQU3 841 aa19.16■□□□□ 0.66
PHRF1-205ENST00000533464 LGSNQ5TDP6 509 aa19.16■□□□□ 0.66
PHRF1-205ENST00000533464 SCYL2Q6P3W7 929 aa19.16■□□□□ 0.66
PHRF1-205ENST00000533464 EXOSC10Q01780 885 aaKnown RBP19.16■□□□□ 0.66
PHRF1-205ENST00000533464 CCDC170Q8IYT3 715 aa19.16■□□□□ 0.66
PHRF1-205ENST00000533464 HSPA1LP34931 641 aa19.16■□□□□ 0.66
PHRF1-205ENST00000533464 IGBP1P78318 339 aa19.16■□□□□ 0.66
PHRF1-205ENST00000533464 LRRC63Q05C16 580 aa19.16■□□□□ 0.66
PHRF1-205ENST00000533464 PPRC1Q5VV67 1664 aaKnown RBP19.16■□□□□ 0.66
PHRF1-205ENST00000533464 MYO1FO00160 1098 aa19.16■□□□□ 0.66
PHRF1-205ENST00000533464 RXRBP28702 533 aa19.16■□□□□ 0.66
PHRF1-205ENST00000533464 CXCR5P32302 372 aa19.16■□□□□ 0.66
PHRF1-205ENST00000533464 CEP95Q96GE4 821 aa19.16■□□□□ 0.66
PHRF1-205ENST00000533464 MED4Q9NPJ6 270 aa19.16■□□□□ 0.66
PHRF1-205ENST00000533464 KMT5AQ9NQR1 393 aa19.16■□□□□ 0.66
PHRF1-205ENST00000533464 OVOS2A0A0J9YW53 1432 aa19.15■□□□□ 0.66
PHRF1-205ENST00000533464 OVOS2Q6IE36 1432 aa19.15■□□□□ 0.66
PHRF1-205ENST00000533464 PPFIA4O75335 1185 aa19.15■□□□□ 0.66
PHRF1-205ENST00000533464 PIK3CAP42336 1068 aa19.15■□□□□ 0.66
PHRF1-205ENST00000533464 PSMC4P43686 418 aa19.15■□□□□ 0.66
PHRF1-205ENST00000533464 HADHQ16836 314 aaKnown RBP19.15■□□□□ 0.66
PHRF1-205ENST00000533464 POTEDQ86YR6 584 aa19.15■□□□□ 0.66
PHRF1-205ENST00000533464 GCNT4Q9P109 453 aa19.15■□□□□ 0.66
PHRF1-205ENST00000533464 MB21D1Q8N884 522 aa19.15■□□□□ 0.66
PHRF1-205ENST00000533464 RAB3IL1Q8TBN0 382 aa19.15■□□□□ 0.66
PHRF1-205ENST00000533464 PTPRUQ92729 1446 aa19.15■□□□□ 0.66
PHRF1-205ENST00000533464 POTEMA6NI47 508 aa19.15■□□□□ 0.66
PHRF1-205ENST00000533464 BSPRYQ5W0U4 402 aa19.15■□□□□ 0.66
PHRF1-205ENST00000533464 FAM160B1Q5W0V3 765 aa19.15■□□□□ 0.66
PHRF1-205ENST00000533464 CTAGE3PQ8IX95 158 aa19.15■□□□□ 0.66
PHRF1-205ENST00000533464 GRK7Q8WTQ7 553 aa19.15■□□□□ 0.66
PHRF1-205ENST00000533464 MFAP3LO75121 409 aa19.15■□□□□ 0.66
PHRF1-205ENST00000533464 CRKP46108 304 aa19.15■□□□□ 0.66
PHRF1-205ENST00000533464 BPIFB4P59827 614 aa19.15■□□□□ 0.66
PHRF1-205ENST00000533464 SLC17A8Q8NDX2 589 aa19.15■□□□□ 0.66
PHRF1-205ENST00000533464 GADD45GIP1Q8TAE8 222 aaPredicted RBP19.15■□□□□ 0.66
PHRF1-205ENST00000533464 MYO3AQ8NEV4 1616 aa19.14■□□□□ 0.66
PHRF1-205ENST00000533464 GOLGA8KD6RF30 607 aa19.14■□□□□ 0.66
PHRF1-205ENST00000533464 STAM2O75886 525 aa19.14■□□□□ 0.66
PHRF1-205ENST00000533464 GFPT2O94808 682 aa19.14■□□□□ 0.66
PHRF1-205ENST00000533464 ARHGAP25P42331 645 aa19.14■□□□□ 0.66
PHRF1-205ENST00000533464 KCTD2Q14681 263 aa19.14■□□□□ 0.66
PHRF1-205ENST00000533464 PPP2R5AQ15172 486 aa19.14■□□□□ 0.66
PHRF1-205ENST00000533464 ZNF772Q68DY9 489 aaPredicted RBP19.14■□□□□ 0.66
PHRF1-205ENST00000533464 CTTNQ14247 550 aaKnown RBP19.14■□□□□ 0.65
PHRF1-205ENST00000533464 TMEM206Q9H813 350 aa19.14■□□□□ 0.65
PHRF1-205ENST00000533464 TTLL3Q9Y4R7 772 aa19.14■□□□□ 0.65
PHRF1-205ENST00000533464 CPS1P31327 1500 aa19.14■□□□□ 0.65
PHRF1-205ENST00000533464 FAM196BA6NMK8 535 aa19.14■□□□□ 0.65
PHRF1-205ENST00000533464 KIF28PB7ZC32 967 aa19.14■□□□□ 0.65
PHRF1-205ENST00000533464 ZBTB5O15062 677 aa19.14■□□□□ 0.65
PHRF1-205ENST00000533464 POLR2BP30876 1174 aaKnown RBP19.14■□□□□ 0.65
PHRF1-205ENST00000533464 CCDC117Q8IWD4 279 aaPredicted RBP19.14■□□□□ 0.65
PHRF1-205ENST00000533464 UTYO14607 1347 aa19.14■□□□□ 0.65
PHRF1-205ENST00000533464 MOCS3O95396 460 aa19.14■□□□□ 0.65
PHRF1-205ENST00000533464 FTCDO95954 541 aa19.14■□□□□ 0.65
PHRF1-205ENST00000533464 TMOD1P28289 359 aa19.14■□□□□ 0.65
PHRF1-205ENST00000533464 PLA2G12BQ9BX93 195 aa19.14■□□□□ 0.65
PHRF1-205ENST00000533464 SLC5A4Q9NY91 659 aa19.14■□□□□ 0.65
PHRF1-205ENST00000533464 SEPT14Q6ZU15 432 aa19.13■□□□□ 0.65
PHRF1-205ENST00000533464 MAGOHBQ96A72 148 aaKnown RBP19.13■□□□□ 0.65
PHRF1-205ENST00000533464 C1orf167Q5SNV9 1468 aa19.13■□□□□ 0.65
PHRF1-205ENST00000533464 STX2P32856 288 aa19.13■□□□□ 0.65
PHRF1-205ENST00000533464 PNMA8AQ86V59 439 aaPredicted RBP19.13■□□□□ 0.65
PHRF1-205ENST00000533464 FAM160B2Q86V87 743 aa19.13■□□□□ 0.65
PHRF1-205ENST00000533464 FAM71BQ8TC56 605 aa19.13■□□□□ 0.65
PHRF1-205ENST00000533464 TRIM49BA6NDI0 452 aa19.13■□□□□ 0.65
PHRF1-205ENST00000533464 USP17L15C9J2P7 530 aa19.13■□□□□ 0.65
PHRF1-205ENST00000533464 USP17L13C9JLJ4 530 aa19.13■□□□□ 0.65
PHRF1-205ENST00000533464 USP17L11C9JVI0 530 aa19.13■□□□□ 0.65
PHRF1-205ENST00000533464 USP17L18D6R9N7 530 aa19.13■□□□□ 0.65
PHRF1-205ENST00000533464 USP17L22D6RA61 530 aa19.13■□□□□ 0.65
PHRF1-205ENST00000533464 USP17L17D6RBQ6 530 aa19.13■□□□□ 0.65
PHRF1-205ENST00000533464 USP17L19D6RCP7 530 aa19.13■□□□□ 0.65
PHRF1-205ENST00000533464 USP17L20D6RJB6 530 aa19.13■□□□□ 0.65
PHRF1-205ENST00000533464 C21orf2O43822 256 aa19.13■□□□□ 0.65
PHRF1-205ENST00000533464 EIF2AK2P19525 551 aaKnown RBP19.13■□□□□ 0.65
PHRF1-205ENST00000533464 USP17L24Q0WX57 530 aa19.13■□□□□ 0.65
PHRF1-205ENST00000533464 USP17L6PQ6QN14 398 aa19.13■□□□□ 0.65
PHRF1-205ENST00000533464 PALM2Q8IXS6 379 aa19.13■□□□□ 0.65
PHRF1-205ENST00000533464 CCDC110Q8TBZ0 833 aa19.13■□□□□ 0.65
PHRF1-205ENST00000533464 KIF11P52732 1056 aa19.13■□□□□ 0.65
PHRF1-205ENST00000533464 KRT81Q14533 505 aa19.13■□□□□ 0.65
PHRF1-205ENST00000533464 GEN1Q17RS7 908 aa19.13■□□□□ 0.65
PHRF1-205ENST00000533464 HACE1Q8IYU2 909 aa19.13■□□□□ 0.65
PHRF1-205ENST00000533464 HOMER3Q9NSC5 361 aa19.13■□□□□ 0.65
PHRF1-205ENST00000533464 HESX1Q9UBX0 185 aa19.13■□□□□ 0.65
PHRF1-205ENST00000533464 ZNF148Q9UQR1 794 aa19.13■□□□□ 0.65
PHRF1-205ENST00000533464 MROH7-TTC4A0A0A0MT08 1334 aa19.13■□□□□ 0.65
PHRF1-205ENST00000533464 PNPLA7Q6ZV29 1317 aa19.13■□□□□ 0.65
PHRF1-205ENST00000533464 ZNF609O15014 1411 aa19.12■□□□□ 0.65
PHRF1-205ENST00000533464 DDIT3P35638 169 aa19.12■□□□□ 0.65
PHRF1-205ENST00000533464 CCDC125Q86Z20 511 aa19.12■□□□□ 0.65
PHRF1-205ENST00000533464 STMN2Q93045 179 aa19.12■□□□□ 0.65
PHRF1-205ENST00000533464 JRKLQ9Y4A0 524 aa19.12■□□□□ 0.65
PHRF1-205ENST00000533464 FAM47CQ5HY64 1035 aa19.12■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms