RNA–Protein interactions for RNA: ENST00000533129.5

CAPN1-224, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CAPN1, Length 2,792 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-224ENST00000533129 NOX5Q96PH1 765 aa16.33■□□□□ 0.21
CAPN1-224ENST00000533129 TRIM9Q9C026 710 aa16.33■□□□□ 0.21
CAPN1-224ENST00000533129 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.33■□□□□ 0.21
CAPN1-224ENST00000533129 CYP2D7A0A087X1C5 515 aa16.33■□□□□ 0.2
CAPN1-224ENST00000533129 HMGB1P1B2RPK0 211 aaPredicted RBP16.33■□□□□ 0.2
CAPN1-224ENST00000533129 NCK2O43639 380 aa16.33■□□□□ 0.2
CAPN1-224ENST00000533129 ORC4O43929 436 aa16.33■□□□□ 0.2
CAPN1-224ENST00000533129 UFL1O94874 794 aa16.33■□□□□ 0.2
CAPN1-224ENST00000533129 GLI1P08151 1106 aa16.33■□□□□ 0.2
CAPN1-224ENST00000533129 VEGFAP15692 232 aaPredicted RBP16.33■□□□□ 0.2
CAPN1-224ENST00000533129 CARSP49589 748 aaKnown RBP16.33■□□□□ 0.2
CAPN1-224ENST00000533129 GUCY1A3Q02108 690 aa16.33■□□□□ 0.2
CAPN1-224ENST00000533129 VWA3BQ502W6 1294 aa16.33■□□□□ 0.2
CAPN1-224ENST00000533129 KLHDC7AQ5VTJ3 777 aa16.33■□□□□ 0.2
CAPN1-224ENST00000533129 PIK3R5Q8WYR1 880 aa16.33■□□□□ 0.2
CAPN1-224ENST00000533129 NSUN4Q96CB9 384 aaKnown RBP16.33■□□□□ 0.2
CAPN1-224ENST00000533129 EEF2KMTQ96G04 330 aa16.33■□□□□ 0.2
CAPN1-224ENST00000533129 C7orf25Q9BPX7 421 aa16.33■□□□□ 0.2
CAPN1-224ENST00000533129 VCPKMTQ9H867 229 aa16.33■□□□□ 0.2
CAPN1-224ENST00000533129 NFU1Q9UMS0 254 aa16.33■□□□□ 0.2
CAPN1-224ENST00000533129 ABCB11O95342 1321 aa16.33■□□□□ 0.2
CAPN1-224ENST00000533129 BAZ2BQ9UIF8 2168 aaKnown RBP16.33■□□□□ 0.2
CAPN1-224ENST00000533129 M0R2N6 131 aa16.32■□□□□ 0.2
CAPN1-224ENST00000533129 PDE6BP35913 854 aa16.32■□□□□ 0.2
CAPN1-224ENST00000533129 STK4Q13043 487 aa16.32■□□□□ 0.2
CAPN1-224ENST00000533129 DRP2Q13474 957 aa16.32■□□□□ 0.2
CAPN1-224ENST00000533129 CCDC84Q86UT8 332 aaPredicted RBP16.32■□□□□ 0.2
CAPN1-224ENST00000533129 WDR66Q8TBY9 1149 aa16.32■□□□□ 0.2
CAPN1-224ENST00000533129 WHAMMQ8TF30 809 aa16.32■□□□□ 0.2
CAPN1-224ENST00000533129 LRRC15Q8TF66 581 aa16.32■□□□□ 0.2
CAPN1-224ENST00000533129 ATP6V1G3Q96LB4 118 aa16.32■□□□□ 0.2
CAPN1-224ENST00000533129 CAMKK2Q96RR4 588 aa16.32■□□□□ 0.2
CAPN1-224ENST00000533129 TMEM60Q9H2L4 133 aa16.32■□□□□ 0.2
CAPN1-224ENST00000533129 FLT1P17948 1338 aa16.32■□□□□ 0.2
CAPN1-224ENST00000533129 CCDC194A0A1B0GVG4 234 aa16.32■□□□□ 0.2
CAPN1-224ENST00000533129 PPEF1O14829 653 aaPredicted RBP16.32■□□□□ 0.2
CAPN1-224ENST00000533129 HEXIM1O94992 359 aaKnown RBP16.32■□□□□ 0.2
CAPN1-224ENST00000533129 NPR1P16066 1061 aa16.32■□□□□ 0.2
CAPN1-224ENST00000533129 KIF5BP33176 963 aa16.32■□□□□ 0.2
CAPN1-224ENST00000533129 MDH1P40925 334 aaKnown RBP16.32■□□□□ 0.2
CAPN1-224ENST00000533129 ACTN3Q08043 901 aaPredicted RBP16.32■□□□□ 0.2
CAPN1-224ENST00000533129 CCDC178Q5BJE1 867 aa16.32■□□□□ 0.2
CAPN1-224ENST00000533129 SLC51AQ86UW1 340 aa16.32■□□□□ 0.2
CAPN1-224ENST00000533129 NLRP14Q86W24 1093 aa16.32■□□□□ 0.2
CAPN1-224ENST00000533129 MYCBPAPQ8TBZ2 947 aa16.32■□□□□ 0.2
CAPN1-224ENST00000533129 AK8Q96MA6 479 aa16.32■□□□□ 0.2
CAPN1-224ENST00000533129 SALL4Q9UJQ4 1053 aa16.32■□□□□ 0.2
CAPN1-224ENST00000533129 GRID2IPA4D2P6 1211 aa16.32■□□□□ 0.2
CAPN1-224ENST00000533129 CHUKO15111 745 aa16.32■□□□□ 0.2
CAPN1-224ENST00000533129 EPHB6O15197 1021 aa16.32■□□□□ 0.2
CAPN1-224ENST00000533129 FAM107AO95990 144 aa16.32■□□□□ 0.2
CAPN1-224ENST00000533129 FAM153BP0C7A2 387 aa16.32■□□□□ 0.2
CAPN1-224ENST00000533129 CCDC172P0C7W6 258 aa16.32■□□□□ 0.2
CAPN1-224ENST00000533129 CHRM1P11229 460 aaPredicted RBP16.32■□□□□ 0.2
CAPN1-224ENST00000533129 SMTNP53814 917 aa16.32■□□□□ 0.2
CAPN1-224ENST00000533129 MECOMQ03112 1051 aa16.32■□□□□ 0.2
CAPN1-224ENST00000533129 ASTE1Q2TB18 679 aaPredicted RBP16.32■□□□□ 0.2
CAPN1-224ENST00000533129 FAM153CQ494X1 144 aa16.32■□□□□ 0.2
CAPN1-224ENST00000533129 SP8Q8IXZ3 490 aa16.32■□□□□ 0.2
CAPN1-224ENST00000533129 MTMR8Q96EF0 704 aa16.32■□□□□ 0.2
CAPN1-224ENST00000533129 CCT8L2Q96SF2 557 aa16.32■□□□□ 0.2
CAPN1-224ENST00000533129 PLIN2Q99541 437 aa16.32■□□□□ 0.2
CAPN1-224ENST00000533129 NDST4Q9H3R1 872 aa16.32■□□□□ 0.2
CAPN1-224ENST00000533129 EPB41L5Q9HCM4 733 aa16.32■□□□□ 0.2
CAPN1-224ENST00000533129 FAM153AQ9UHL3 310 aa16.32■□□□□ 0.2
CAPN1-224ENST00000533129 SSU72P8A0A1W2PR75 194 aa16.31■□□□□ 0.2
CAPN1-224ENST00000533129 PLCG1P19174 1290 aa16.31■□□□□ 0.2
CAPN1-224ENST00000533129 SLC15A2Q16348 729 aa16.31■□□□□ 0.2
CAPN1-224ENST00000533129 CNNM4Q6P4Q7 775 aa16.31■□□□□ 0.2
CAPN1-224ENST00000533129 FAM207AQ9NSI2 230 aaPredicted RBP16.31■□□□□ 0.2
CAPN1-224ENST00000533129 STK32BQ9NY57 414 aa16.31■□□□□ 0.2
CAPN1-224ENST00000533129 LTBP1Q14766 1721 aa16.31■□□□□ 0.2
CAPN1-224ENST00000533129 QSER1Q2KHR3 1735 aa16.31■□□□□ 0.2
CAPN1-224ENST00000533129 LRRC53A6NM62 1247 aa16.31■□□□□ 0.2
CAPN1-224ENST00000533129 ASIC1P78348 528 aa16.31■□□□□ 0.2
CAPN1-224ENST00000533129 GUCY2DQ02846 1103 aa16.31■□□□□ 0.2
CAPN1-224ENST00000533129 MAN2A1Q16706 1144 aa16.31■□□□□ 0.2
CAPN1-224ENST00000533129 CENPPQ6IPU0 288 aa16.31■□□□□ 0.2
CAPN1-224ENST00000533129 CABP7Q86V35 215 aa16.31■□□□□ 0.2
CAPN1-224ENST00000533129 DAGLBQ8NCG7 672 aa16.31■□□□□ 0.2
CAPN1-224ENST00000533129 ZNF384Q8TF68 577 aa16.31■□□□□ 0.2
CAPN1-224ENST00000533129 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.31■□□□□ 0.2
CAPN1-224ENST00000533129 EDEM3Q9BZQ6 932 aa16.31■□□□□ 0.2
CAPN1-224ENST00000533129 RBAK-RBAKDNI3L0D1 243 aa16.3■□□□□ 0.2
CAPN1-224ENST00000533129 ITGB3BPQ13352 177 aaPredicted RBP16.3■□□□□ 0.2
CAPN1-224ENST00000533129 PPP4R3AQ6IN85 833 aa16.3■□□□□ 0.2
CAPN1-224ENST00000533129 ARHGAP27Q6ZUM4 889 aa16.3■□□□□ 0.2
CAPN1-224ENST00000533129 BAP1Q92560 729 aa16.3■□□□□ 0.2
CAPN1-224ENST00000533129 MS4A14Q96JA4 679 aa16.3■□□□□ 0.2
CAPN1-224ENST00000533129 ATP6V0A2Q9Y487 856 aa16.3■□□□□ 0.2
CAPN1-224ENST00000533129 KIAA1551Q9HCM1 1747 aa16.3■□□□□ 0.2
CAPN1-224ENST00000533129 NKRFO15226 690 aaKnown RBP eCLIP16.3■□□□□ 0.2
CAPN1-224ENST00000533129 FCER1AP12319 257 aa16.3■□□□□ 0.2
CAPN1-224ENST00000533129 PRDX5P30044 214 aa16.3■□□□□ 0.2
CAPN1-224ENST00000533129 ALDH1B1P30837 517 aa16.3■□□□□ 0.2
CAPN1-224ENST00000533129 EN1Q05925 392 aaPredicted RBP16.3■□□□□ 0.2
CAPN1-224ENST00000533129 GALNT17Q6IS24 598 aa16.3■□□□□ 0.2
CAPN1-224ENST00000533129 RRAGAQ7L523 313 aa16.3■□□□□ 0.2
CAPN1-224ENST00000533129 ARFGAP2Q8N6H7 521 aa16.3■□□□□ 0.2
CAPN1-224ENST00000533129 C3orf20Q8ND61 904 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms