RNA–Protein interactions for RNA: ENST00000533069.1

PKP3-209, Transcript of plakophilin 3, humanhuman

TSL 2

Gene PKP3, Length 590 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-209ENST00000533069 KATNAL1Q9BW62 490 aa19.12■□□□□ 0.65
PKP3-209ENST00000533069 TM6SF1Q9BZW5 370 aa19.12■□□□□ 0.65
PKP3-209ENST00000533069 GLT8D2Q9H1C3 349 aa19.12■□□□□ 0.65
PKP3-209ENST00000533069 EHMT1Q9H9B1 1298 aa19.12■□□□□ 0.65
PKP3-209ENST00000533069 ZSWIM6Q9HCJ5 1215 aa19.12■□□□□ 0.65
PKP3-209ENST00000533069 V9GY48 417 aaPredicted RBP19.12■□□□□ 0.65
PKP3-209ENST00000533069 SPATA31C2B4DYI2 1134 aa19.11■□□□□ 0.65
PKP3-209ENST00000533069 PPFIA4O75335 1185 aa19.11■□□□□ 0.65
PKP3-209ENST00000533069 EPHB4P54760 987 aa19.11■□□□□ 0.65
PKP3-209ENST00000533069 NEDD9Q14511 834 aa19.11■□□□□ 0.65
PKP3-209ENST00000533069 NLRX1Q86UT6 975 aa19.11■□□□□ 0.65
PKP3-209ENST00000533069 RNPC3Q96LT9 517 aaKnown RBP19.11■□□□□ 0.65
PKP3-209ENST00000533069 NOC4LQ9BVI4 516 aaKnown RBP19.11■□□□□ 0.65
PKP3-209ENST00000533069 MLXIPQ9HAP2 919 aa19.11■□□□□ 0.65
PKP3-209ENST00000533069 TRMT13Q9NUP7 481 aaKnown RBP19.11■□□□□ 0.65
PKP3-209ENST00000533069 BARHL2Q9NY43 387 aa19.11■□□□□ 0.65
PKP3-209ENST00000533069 CYP46A1Q9Y6A2 500 aa19.11■□□□□ 0.65
PKP3-209ENST00000533069 BAZ2BQ9UIF8 2168 aaKnown RBP19.1■□□□□ 0.65
PKP3-209ENST00000533069 F2P00734 622 aa19.1■□□□□ 0.65
PKP3-209ENST00000533069 ADD1P35611 737 aaKnown RBP19.1■□□□□ 0.65
PKP3-209ENST00000533069 EVCP57679 992 aa19.1■□□□□ 0.65
PKP3-209ENST00000533069 SP2Q02086 613 aa19.1■□□□□ 0.65
PKP3-209ENST00000533069 UBE2SQ16763 222 aa19.1■□□□□ 0.65
PKP3-209ENST00000533069 PSRC1Q6PGN9 363 aaPredicted RBP19.1■□□□□ 0.65
PKP3-209ENST00000533069 SESTD1Q86VW0 696 aa19.1■□□□□ 0.65
PKP3-209ENST00000533069 KAT2BQ92831 832 aa19.1■□□□□ 0.65
PKP3-209ENST00000533069 ZFP91Q96JP5 570 aaPredicted RBP19.1■□□□□ 0.65
PKP3-209ENST00000533069 CDHR1Q96JP9 859 aa19.1■□□□□ 0.65
PKP3-209ENST00000533069 RIC8AQ9NPQ8 531 aa19.1■□□□□ 0.65
PKP3-209ENST00000533069 STXBP3O00186 592 aa19.09■□□□□ 0.65
PKP3-209ENST00000533069 CSF2RAP15509 400 aa19.09■□□□□ 0.65
PKP3-209ENST00000533069 CYP2C18P33260 490 aa19.09■□□□□ 0.65
PKP3-209ENST00000533069 ADCY7P51828 1080 aa19.09■□□□□ 0.65
PKP3-209ENST00000533069 HSDL1Q3SXM5 330 aa19.09■□□□□ 0.65
PKP3-209ENST00000533069 METTL7BQ6UX53 244 aa19.09■□□□□ 0.65
PKP3-209ENST00000533069 GIMAP8Q8ND71 665 aaPredicted RBP19.09■□□□□ 0.65
PKP3-209ENST00000533069 GPRASP2Q96D09 838 aa19.09■□□□□ 0.65
PKP3-209ENST00000533069 SENP7Q9BQF6 1050 aa19.09■□□□□ 0.65
PKP3-209ENST00000533069 RTEL1Q9NZ71 1219 aa19.09■□□□□ 0.65
PKP3-209ENST00000533069 PCDHA6Q9UN73 950 aa19.09■□□□□ 0.65
PKP3-209ENST00000533069 NOD1Q9Y239 953 aa19.09■□□□□ 0.65
PKP3-209ENST00000533069 PCDHA8Q9Y5H6 950 aa19.09■□□□□ 0.65
PKP3-209ENST00000533069 KIAA1217Q5T5P2 1943 aa19.09■□□□□ 0.65
PKP3-209ENST00000533069 FOSP01100 380 aaPredicted RBP19.08■□□□□ 0.64
PKP3-209ENST00000533069 CHMP4BP1P59074 171 aa19.08■□□□□ 0.64
PKP3-209ENST00000533069 PFKFB3Q16875 520 aaPredicted RBP19.08■□□□□ 0.64
PKP3-209ENST00000533069 TYW1BQ6NUM6 668 aa19.08■□□□□ 0.64
PKP3-209ENST00000533069 CCDC12Q8WUD4 166 aaPredicted RBP19.08■□□□□ 0.64
PKP3-209ENST00000533069 IL23AQ9NPF7 189 aa19.08■□□□□ 0.64
PKP3-209ENST00000533069 SCN10AQ9Y5Y9 1956 aa19.08■□□□□ 0.64
PKP3-209ENST00000533069 SZT2Q5T011 3432 aa19.07■□□□□ 0.64
PKP3-209ENST00000533069 UMODL1Q5DID0 1318 aa19.07■□□□□ 0.64
PKP3-209ENST00000533069 SMCO2A6NFE2 343 aa19.07■□□□□ 0.64
PKP3-209ENST00000533069 HAS3O00219 553 aa19.07■□□□□ 0.64
PKP3-209ENST00000533069 PITPNM1O00562 1244 aa19.07■□□□□ 0.64
PKP3-209ENST00000533069 NOP56O00567 594 aaKnown RBP19.07■□□□□ 0.64
PKP3-209ENST00000533069 PRPF3O43395 683 aaKnown RBP19.07■□□□□ 0.64
PKP3-209ENST00000533069 ZNF286BP0CG31 522 aa19.07■□□□□ 0.64
PKP3-209ENST00000533069 CYP2C9P11712 490 aa19.07■□□□□ 0.64
PKP3-209ENST00000533069 SCG2P13521 617 aa19.07■□□□□ 0.64
PKP3-209ENST00000533069 PSEN2P49810 448 aa19.07■□□□□ 0.64
PKP3-209ENST00000533069 SMAD3P84022 425 aaKnown RBP19.07■□□□□ 0.64
PKP3-209ENST00000533069 SEMA3FQ13275 785 aa19.07■□□□□ 0.64
PKP3-209ENST00000533069 AP3B2Q13367 1082 aa19.07■□□□□ 0.64
PKP3-209ENST00000533069 MFSD10Q14728 455 aa19.07■□□□□ 0.64
PKP3-209ENST00000533069 C7orf31Q8N865 590 aa19.07■□□□□ 0.64
PKP3-209ENST00000533069 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.07■□□□□ 0.64
PKP3-209ENST00000533069 WNT8AQ9H1J5 351 aa19.07■□□□□ 0.64
PKP3-209ENST00000533069 MAFGO15525 162 aa19.06■□□□□ 0.64
PKP3-209ENST00000533069 SORBS3O60504 671 aa19.06■□□□□ 0.64
PKP3-209ENST00000533069 PDIA3P30101 505 aaKnown RBP19.06■□□□□ 0.64
PKP3-209ENST00000533069 CCL23P55773 120 aa19.06■□□□□ 0.64
PKP3-209ENST00000533069 AKAP17AQ02040 695 aaKnown RBP19.06■□□□□ 0.64
PKP3-209ENST00000533069 BFSP2Q13515 415 aa19.06■□□□□ 0.64
PKP3-209ENST00000533069 TOB2Q14106 344 aaPredicted RBP19.06■□□□□ 0.64
PKP3-209ENST00000533069 PTGISQ16647 500 aa19.06■□□□□ 0.64
PKP3-209ENST00000533069 KIAA0753Q2KHM9 967 aa19.06■□□□□ 0.64
PKP3-209ENST00000533069 FAM109BQ6ICB4 259 aaPredicted RBP19.06■□□□□ 0.64
PKP3-209ENST00000533069 C16orf59Q7L2K0 433 aa19.06■□□□□ 0.64
PKP3-209ENST00000533069 CYFIP1Q7L576 1253 aa19.06■□□□□ 0.64
PKP3-209ENST00000533069 CCDC155Q8N6L0 562 aa19.06■□□□□ 0.64
PKP3-209ENST00000533069 IL27Q8NEV9 243 aa19.06■□□□□ 0.64
PKP3-209ENST00000533069 RNF26Q9BY78 433 aaPredicted RBP19.06■□□□□ 0.64
PKP3-209ENST00000533069 GTF2IRD1Q9UHL9 959 aa19.06■□□□□ 0.64
PKP3-209ENST00000533069 UBIAD1Q9Y5Z9 338 aa19.06■□□□□ 0.64
PKP3-209ENST00000533069 ESYT2A0FGR8 921 aa19.05■□□□□ 0.64
PKP3-209ENST00000533069 PFKMP08237 780 aa19.05■□□□□ 0.64
PKP3-209ENST00000533069 IFNAR1P17181 557 aa19.05■□□□□ 0.64
PKP3-209ENST00000533069 ITGB5P18084 799 aa19.05■□□□□ 0.64
PKP3-209ENST00000533069 RFC2P35250 354 aa19.05■□□□□ 0.64
PKP3-209ENST00000533069 ANAPC15P60006 121 aa19.05■□□□□ 0.64
PKP3-209ENST00000533069 MTMR1Q13613 665 aa19.05■□□□□ 0.64
PKP3-209ENST00000533069 TMEM240Q5SV17 173 aa19.05■□□□□ 0.64
PKP3-209ENST00000533069 MCTP2Q6DN12 878 aa19.05■□□□□ 0.64
PKP3-209ENST00000533069 RPUSD2Q8IZ73 545 aaKnown RBP19.05■□□□□ 0.64
PKP3-209ENST00000533069 DEFB123Q8N688 67 aa19.05■□□□□ 0.64
PKP3-209ENST00000533069 C16orf70Q9BSU1 422 aa19.05■□□□□ 0.64
PKP3-209ENST00000533069 ALG1Q9BT22 464 aa19.05■□□□□ 0.64
PKP3-209ENST00000533069 UPF3BQ9BZI7 483 aaKnown RBP19.05■□□□□ 0.64
PKP3-209ENST00000533069 MTIF3Q9H2K0 278 aaKnown RBP19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms