RNA–Protein interactions for RNA: ENST00000532566.3

PCDHA3-202, Transcript of protocadherin alpha 3, humanhuman

BASIC

Gene PCDHA3, Length 4,594 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-202ENST00000532566 ABHD10Q9NUJ1 306 aa16.75■□□□□ 0.27
PCDHA3-202ENST00000532566 CLCN6P51797 869 aa16.75■□□□□ 0.27
PCDHA3-202ENST00000532566 GUCY2DQ02846 1103 aa16.75■□□□□ 0.27
PCDHA3-202ENST00000532566 DENND2CQ68D51 928 aa16.75■□□□□ 0.27
PCDHA3-202ENST00000532566 PPP1R18Q6NYC8 613 aa16.75■□□□□ 0.27
PCDHA3-202ENST00000532566 TOGARAM2Q6ZUX3 1019 aa16.75■□□□□ 0.27
PCDHA3-202ENST00000532566 FAM160B2Q86V87 743 aa16.75■□□□□ 0.27
PCDHA3-202ENST00000532566 FAM133AQ8N9E0 248 aa16.75■□□□□ 0.27
PCDHA3-202ENST00000532566 POMGNT1Q8WZA1 660 aa16.75■□□□□ 0.27
PCDHA3-202ENST00000532566 ATP6V0A1Q93050 837 aa16.75■□□□□ 0.27
PCDHA3-202ENST00000532566 VTI1AQ96AJ9 217 aa16.75■□□□□ 0.27
PCDHA3-202ENST00000532566 MLXIPQ9HAP2 919 aa16.75■□□□□ 0.27
PCDHA3-202ENST00000532566 SPATA31A1Q5TZJ5 1347 aa16.74■□□□□ 0.27
PCDHA3-202ENST00000532566 HOXA13P31271 388 aaPredicted RBP16.74■□□□□ 0.27
PCDHA3-202ENST00000532566 CEP85LQ5SZL2 805 aa16.74■□□□□ 0.27
PCDHA3-202ENST00000532566 FBXO38Q6PIJ6 1188 aa16.74■□□□□ 0.27
PCDHA3-202ENST00000532566 TAOK1Q7L7X3 1001 aa16.74■□□□□ 0.27
PCDHA3-202ENST00000532566 SLC17A8Q8NDX2 589 aa16.74■□□□□ 0.27
PCDHA3-202ENST00000532566 PHF20Q9BVI0 1012 aa16.74■□□□□ 0.27
PCDHA3-202ENST00000532566 TXNDC16Q9P2K2 825 aa16.74■□□□□ 0.27
PCDHA3-202ENST00000532566 TTC31Q49AM3 519 aaPredicted RBP16.74■□□□□ 0.27
PCDHA3-202ENST00000532566 SENP2Q9HC62 589 aa16.74■□□□□ 0.27
PCDHA3-202ENST00000532566 PP2D1A8MPX8 630 aa16.74■□□□□ 0.27
PCDHA3-202ENST00000532566 SLC8A3P57103 927 aa16.74■□□□□ 0.27
PCDHA3-202ENST00000532566 CCDC63Q8NA47 563 aa16.74■□□□□ 0.27
PCDHA3-202ENST00000532566 HINFPQ9BQA5 517 aa16.74■□□□□ 0.27
PCDHA3-202ENST00000532566 HPS5Q9UPZ3 1129 aa16.74■□□□□ 0.27
PCDHA3-202ENST00000532566 HNRNPDLO14979 420 aaKnown RBP16.74■□□□□ 0.27
PCDHA3-202ENST00000532566 TEX33O43247 280 aa16.74■□□□□ 0.27
PCDHA3-202ENST00000532566 SEMA3FQ13275 785 aa16.74■□□□□ 0.27
PCDHA3-202ENST00000532566 ITPK1Q13572 414 aa16.74■□□□□ 0.27
PCDHA3-202ENST00000532566 SETDB1Q15047 1291 aa16.74■□□□□ 0.27
PCDHA3-202ENST00000532566 ZBTB8OSQ8IWT0 167 aa16.74■□□□□ 0.27
PCDHA3-202ENST00000532566 PAGR1Q9BTK6 254 aa16.74■□□□□ 0.27
PCDHA3-202ENST00000532566 PLCB1Q9NQ66 1216 aa16.74■□□□□ 0.27
PCDHA3-202ENST00000532566 RNF14Q9UBS8 474 aa16.74■□□□□ 0.27
PCDHA3-202ENST00000532566 KDM6AO15550 1401 aaPredicted RBP16.73■□□□□ 0.27
PCDHA3-202ENST00000532566 USP27XA6NNY8 438 aa16.73■□□□□ 0.27
PCDHA3-202ENST00000532566 STAMBPO95630 424 aa16.73■□□□□ 0.27
PCDHA3-202ENST00000532566 SERPING1P05155 500 aa16.73■□□□□ 0.27
PCDHA3-202ENST00000532566 ZNF772Q68DY9 489 aaPredicted RBP16.73■□□□□ 0.27
PCDHA3-202ENST00000532566 GCNT4Q9P109 453 aa16.73■□□□□ 0.27
PCDHA3-202ENST00000532566 FAM205CA6NFA0 338 aa16.73■□□□□ 0.27
PCDHA3-202ENST00000532566 USP17L15C9J2P7 530 aa16.73■□□□□ 0.27
PCDHA3-202ENST00000532566 USP17L13C9JLJ4 530 aa16.73■□□□□ 0.27
PCDHA3-202ENST00000532566 USP17L11C9JVI0 530 aa16.73■□□□□ 0.27
PCDHA3-202ENST00000532566 USP17L18D6R9N7 530 aa16.73■□□□□ 0.27
PCDHA3-202ENST00000532566 USP17L22D6RA61 530 aa16.73■□□□□ 0.27
PCDHA3-202ENST00000532566 USP17L17D6RBQ6 530 aa16.73■□□□□ 0.27
PCDHA3-202ENST00000532566 USP17L19D6RCP7 530 aa16.73■□□□□ 0.27
PCDHA3-202ENST00000532566 GOLGA8KD6RF30 607 aa16.73■□□□□ 0.27
PCDHA3-202ENST00000532566 USP17L20D6RJB6 530 aa16.73■□□□□ 0.27
PCDHA3-202ENST00000532566 POLGP54098 1239 aaPredicted RBP16.73■□□□□ 0.27
PCDHA3-202ENST00000532566 YWHAEP62258 255 aaKnown RBP16.73■□□□□ 0.27
PCDHA3-202ENST00000532566 USP17L24Q0WX57 530 aa16.73■□□□□ 0.27
PCDHA3-202ENST00000532566 USP17L6PQ6QN14 398 aa16.73■□□□□ 0.27
PCDHA3-202ENST00000532566 SMIM5Q71RC9 77 aa16.73■□□□□ 0.27
PCDHA3-202ENST00000532566 TUBE1Q9UJT0 475 aa16.73■□□□□ 0.27
PCDHA3-202ENST00000532566 AFF2P51816 1311 aa16.73■□□□□ 0.27
PCDHA3-202ENST00000532566 LRRIQ4A6NIV6 560 aa16.73■□□□□ 0.27
PCDHA3-202ENST00000532566 SNX16P57768 344 aa16.73■□□□□ 0.27
PCDHA3-202ENST00000532566 BRDTQ58F21 947 aaPredicted RBP16.73■□□□□ 0.27
PCDHA3-202ENST00000532566 NT5C1BQ96P26 610 aa16.73■□□□□ 0.27
PCDHA3-202ENST00000532566 ACCSQ96QU6 501 aa16.73■□□□□ 0.27
PCDHA3-202ENST00000532566 DPH5Q9H2P9 285 aa16.73■□□□□ 0.27
PCDHA3-202ENST00000532566 PCDHA13Q9Y5I0 950 aa16.73■□□□□ 0.27
PCDHA3-202ENST00000532566 SPZ1Q9BXG8 430 aa16.72■□□□□ 0.27
PCDHA3-202ENST00000532566 TMEM206Q9H813 350 aa16.72■□□□□ 0.27
PCDHA3-202ENST00000532566 USP17L10C9JJH3 530 aa16.72■□□□□ 0.27
PCDHA3-202ENST00000532566 MOCS3O95396 460 aa16.72■□□□□ 0.27
PCDHA3-202ENST00000532566 USP14P54578 494 aa16.72■□□□□ 0.27
PCDHA3-202ENST00000532566 POTEDQ86YR6 584 aa16.72■□□□□ 0.27
PCDHA3-202ENST00000532566 PROM2Q8N271 834 aa16.72■□□□□ 0.27
PCDHA3-202ENST00000532566 CABS1Q96KC9 395 aa16.72■□□□□ 0.27
PCDHA3-202ENST00000532566 KRT12Q99456 494 aa16.72■□□□□ 0.27
PCDHA3-202ENST00000532566 FAM204AQ9H8W3 233 aa16.72■□□□□ 0.27
PCDHA3-202ENST00000532566 TMEM260Q9NX78 707 aa16.72■□□□□ 0.27
PCDHA3-202ENST00000532566 INPP5BP32019 993 aa16.72■□□□□ 0.27
PCDHA3-202ENST00000532566 UAP1Q16222 522 aaPredicted RBP16.72■□□□□ 0.27
PCDHA3-202ENST00000532566 TRIM6Q9C030 488 aaPredicted RBP16.72■□□□□ 0.27
PCDHA3-202ENST00000532566 KCNF1Q9H3M0 494 aa16.72■□□□□ 0.27
PCDHA3-202ENST00000532566 FAM196BA6NMK8 535 aa16.72■□□□□ 0.27
PCDHA3-202ENST00000532566 PRPF6O94906 941 aaKnown RBP16.72■□□□□ 0.27
PCDHA3-202ENST00000532566 ADAT2Q7Z6V5 191 aaKnown RBP16.72■□□□□ 0.27
PCDHA3-202ENST00000532566 ZNF408Q9H9D4 720 aa16.72■□□□□ 0.27
PCDHA3-202ENST00000532566 PCDHA6Q9UN73 950 aa16.72■□□□□ 0.27
PCDHA3-202ENST00000532566 PCDHA8Q9Y5H6 950 aa16.72■□□□□ 0.27
PCDHA3-202ENST00000532566 APBA1Q02410 837 aa16.71■□□□□ 0.27
PCDHA3-202ENST00000532566 SLC27A3Q5K4L6 730 aa16.71■□□□□ 0.27
PCDHA3-202ENST00000532566 ENGASEQ8NFI3 743 aa16.71■□□□□ 0.27
PCDHA3-202ENST00000532566 TDRD3Q9H7E2 651 aaKnown RBP16.71■□□□□ 0.27
PCDHA3-202ENST00000532566 MFAP3P55082 362 aa16.71■□□□□ 0.27
PCDHA3-202ENST00000532566 SNAP25P60880 206 aa16.71■□□□□ 0.27
PCDHA3-202ENST00000532566 NAA35Q5VZE5 725 aa16.71■□□□□ 0.27
PCDHA3-202ENST00000532566 MIGA2Q7L4E1 593 aa16.71■□□□□ 0.27
PCDHA3-202ENST00000532566 FBXO33Q7Z6M2 555 aa16.71■□□□□ 0.27
PCDHA3-202ENST00000532566 RAD54LQ92698 747 aa16.71■□□□□ 0.27
PCDHA3-202ENST00000532566 DPF2Q92785 391 aa16.71■□□□□ 0.27
PCDHA3-202ENST00000532566 SORBS3O60504 671 aa16.71■□□□□ 0.27
PCDHA3-202ENST00000532566 PPFIA4O75335 1185 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms