RNA–Protein interactions for RNA: ENST00000531326.1

PTPN11-204, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

TSL 4

Gene PTPN11, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-204ENST00000531326 NR3C2P08235 984 aa20.69■□□□□ 0.9
PTPN11-204ENST00000531326 HSD17B4P51659 736 aa20.69■□□□□ 0.9
PTPN11-204ENST00000531326 MRPS5P82675 430 aaKnown RBP20.69■□□□□ 0.9
PTPN11-204ENST00000531326 WTAPQ15007 396 aa20.69■□□□□ 0.9
PTPN11-204ENST00000531326 ARHGEF16Q5VV41 709 aa20.69■□□□□ 0.9
PTPN11-204ENST00000531326 PHOSPHO2Q8TCD6 241 aa20.69■□□□□ 0.9
PTPN11-204ENST00000531326 MTMR8Q96EF0 704 aa20.69■□□□□ 0.9
PTPN11-204ENST00000531326 BACH2Q9BYV9 841 aa20.69■□□□□ 0.9
PTPN11-204ENST00000531326 CERS4Q9HA82 394 aa20.69■□□□□ 0.9
PTPN11-204ENST00000531326 PRRC2BQ5JSZ5 2229 aaKnown RBP20.68■□□□□ 0.9
PTPN11-204ENST00000531326 EIF3JO75822 258 aaKnown RBP20.68■□□□□ 0.9
PTPN11-204ENST00000531326 CASTP20810 708 aaKnown RBP20.68■□□□□ 0.9
PTPN11-204ENST00000531326 PSMA5P28066 241 aa20.68■□□□□ 0.9
PTPN11-204ENST00000531326 GHRHRQ02643 423 aa20.68■□□□□ 0.9
PTPN11-204ENST00000531326 BLOC1S2Q6QNY1 142 aa20.68■□□□□ 0.9
PTPN11-204ENST00000531326 HERC6Q8IVU3 1022 aa20.68■□□□□ 0.9
PTPN11-204ENST00000531326 MICALL1Q8N3F8 863 aa20.68■□□□□ 0.9
PTPN11-204ENST00000531326 CAGE1Q8TC20 777 aa20.68■□□□□ 0.9
PTPN11-204ENST00000531326 EMID1Q96A84 441 aaPredicted RBP20.68■□□□□ 0.9
PTPN11-204ENST00000531326 AMNQ9BXJ7 453 aa20.68■□□□□ 0.9
PTPN11-204ENST00000531326 TM6SF1Q9BZW5 370 aa20.68■□□□□ 0.9
PTPN11-204ENST00000531326 ZSWIM6Q9HCJ5 1215 aa20.68■□□□□ 0.9
PTPN11-204ENST00000531326 RGS20O76081 388 aa20.67■□□□□ 0.9
PTPN11-204ENST00000531326 RPS6KB1P23443 525 aa20.67■□□□□ 0.9
PTPN11-204ENST00000531326 TAP1Q03518 808 aa20.67■□□□□ 0.9
PTPN11-204ENST00000531326 DGKDQ16760 1214 aa20.67■□□□□ 0.9
PTPN11-204ENST00000531326 SLC35G1Q2M3R5 365 aa20.67■□□□□ 0.9
PTPN11-204ENST00000531326 ADAMTS19Q8TE59 1207 aa20.67■□□□□ 0.9
PTPN11-204ENST00000531326 AFAP1L1Q8TED9 768 aa20.67■□□□□ 0.9
PTPN11-204ENST00000531326 HDAC6Q9UBN7 1215 aa20.67■□□□□ 0.9
PTPN11-204ENST00000531326 GTF2IRD1Q9UHL9 959 aa20.67■□□□□ 0.9
PTPN11-204ENST00000531326 MAD2L2Q9UI95 211 aa20.67■□□□□ 0.9
PTPN11-204ENST00000531326 MTCH2Q9Y6C9 303 aa20.67■□□□□ 0.9
PTPN11-204ENST00000531326 KLRF2D3W0D1 207 aa20.66■□□□□ 0.9
PTPN11-204ENST00000531326 BAIAP3O94812 1187 aa20.66■□□□□ 0.9
PTPN11-204ENST00000531326 POU3F3P20264 500 aaPredicted RBP20.66■□□□□ 0.9
PTPN11-204ENST00000531326 LIFRP42702 1097 aa20.66■□□□□ 0.9
PTPN11-204ENST00000531326 RBL2Q08999 1139 aa20.66■□□□□ 0.9
PTPN11-204ENST00000531326 RUFY3Q7L099 469 aa20.66■□□□□ 0.9
PTPN11-204ENST00000531326 SPRED2Q7Z698 418 aa20.66■□□□□ 0.9
PTPN11-204ENST00000531326 CCDC155Q8N6L0 562 aa20.66■□□□□ 0.9
PTPN11-204ENST00000531326 PDCD2LQ9BRP1 358 aa20.66■□□□□ 0.9
PTPN11-204ENST00000531326 MRVI1Q9Y6F6 885 aa20.66■□□□□ 0.9
PTPN11-204ENST00000531326 PALM3A6NDB9 673 aaPredicted RBP20.65■□□□□ 0.9
PTPN11-204ENST00000531326 HAS3O00219 553 aa20.65■□□□□ 0.9
PTPN11-204ENST00000531326 ZBTB5O15062 677 aa20.65■□□□□ 0.9
PTPN11-204ENST00000531326 F2P00734 622 aa20.65■□□□□ 0.9
PTPN11-204ENST00000531326 ZNF286BP0CG31 522 aa20.65■□□□□ 0.9
PTPN11-204ENST00000531326 SELPP16109 830 aa20.65■□□□□ 0.9
PTPN11-204ENST00000531326 PSEN2P49810 448 aa20.65■□□□□ 0.9
PTPN11-204ENST00000531326 TCTN1Q2MV58 587 aa20.65■□□□□ 0.9
PTPN11-204ENST00000531326 KRT40Q6A162 431 aa20.65■□□□□ 0.9
PTPN11-204ENST00000531326 LRRC8DQ7L1W4 858 aa20.65■□□□□ 0.9
PTPN11-204ENST00000531326 SGMS1Q86VZ5 419 aa20.65■□□□□ 0.9
PTPN11-204ENST00000531326 PPTC7Q8NI37 304 aa20.65■□□□□ 0.9
PTPN11-204ENST00000531326 ALG1Q9BT22 464 aa20.65■□□□□ 0.9
PTPN11-204ENST00000531326 C22orf23Q9BZE7 217 aa20.65■□□□□ 0.9
PTPN11-204ENST00000531326 UPF3BQ9BZI7 483 aaKnown RBP20.65■□□□□ 0.9
PTPN11-204ENST00000531326 TCF20Q9UGU0 1960 aaKnown RBP20.65■□□□□ 0.9
PTPN11-204ENST00000531326 BAZ2BQ9UIF8 2168 aaKnown RBP20.64■□□□□ 0.89
PTPN11-204ENST00000531326 NBNO60934 754 aa20.64■□□□□ 0.89
PTPN11-204ENST00000531326 CKBP12277 381 aa20.64■□□□□ 0.89
PTPN11-204ENST00000531326 HOXD8P13378 290 aaPredicted RBP20.64■□□□□ 0.89
PTPN11-204ENST00000531326 HOXA13P31271 388 aaPredicted RBP20.64■□□□□ 0.89
PTPN11-204ENST00000531326 RBM25P49756 843 aaKnown RBP20.64■□□□□ 0.89
PTPN11-204ENST00000531326 WDR5P61964 334 aaKnown RBP20.64■□□□□ 0.89
PTPN11-204ENST00000531326 TFF2Q03403 129 aa20.64■□□□□ 0.89
PTPN11-204ENST00000531326 LAMC2Q13753 1193 aa20.64■□□□□ 0.89
PTPN11-204ENST00000531326 MFSD10Q14728 455 aa20.64■□□□□ 0.89
PTPN11-204ENST00000531326 TMCO2Q7Z6W1 182 aaPredicted RBP20.64■□□□□ 0.89
PTPN11-204ENST00000531326 DHX37Q8IY37 1157 aaKnown RBP20.64■□□□□ 0.89
PTPN11-204ENST00000531326 TMTC2Q8N394 836 aa20.64■□□□□ 0.89
PTPN11-204ENST00000531326 FBXL16Q8N461 479 aa20.64■□□□□ 0.89
PTPN11-204ENST00000531326 IL31RAQ8NI17 732 aa20.64■□□□□ 0.89
PTPN11-204ENST00000531326 WNT8BQ93098 351 aa20.64■□□□□ 0.89
PTPN11-204ENST00000531326 PCDHA1Q9Y5I3 950 aa20.64■□□□□ 0.89
PTPN11-204ENST00000531326 CYP46A1Q9Y6A2 500 aa20.64■□□□□ 0.89
PTPN11-204ENST00000531326 NCOR1O75376 2440 aa20.63■□□□□ 0.89
PTPN11-204ENST00000531326 CXCL10P02778 98 aa20.63■□□□□ 0.89
PTPN11-204ENST00000531326 MYCLP12524 364 aaPredicted RBP20.63■□□□□ 0.89
PTPN11-204ENST00000531326 TROAPQ12815 778 aa20.63■□□□□ 0.89
PTPN11-204ENST00000531326 HIC1Q14526 733 aa20.63■□□□□ 0.89
PTPN11-204ENST00000531326 PGM5Q15124 567 aa20.63■□□□□ 0.89
PTPN11-204ENST00000531326 KIAA0753Q2KHM9 967 aa20.63■□□□□ 0.89
PTPN11-204ENST00000531326 TRIM71Q2Q1W2 868 aaKnown RBP20.63■□□□□ 0.89
PTPN11-204ENST00000531326 MYSM1Q5VVJ2 828 aa20.63■□□□□ 0.89
PTPN11-204ENST00000531326 TRAF7Q6Q0C0 670 aa20.63■□□□□ 0.89
PTPN11-204ENST00000531326 Q6ZUG5 572 aa20.63■□□□□ 0.89
PTPN11-204ENST00000531326 ZNF654Q8IZM8 581 aa20.63■□□□□ 0.89
PTPN11-204ENST00000531326 C7orf31Q8N865 590 aa20.63■□□□□ 0.89
PTPN11-204ENST00000531326 ARNTL2Q8WYA1 636 aa20.63■□□□□ 0.89
PTPN11-204ENST00000531326 UHRF1Q96T88 793 aaPredicted RBP20.63■□□□□ 0.89
PTPN11-204ENST00000531326 KIF2CQ99661 725 aa20.63■□□□□ 0.89
PTPN11-204ENST00000531326 KATNAL1Q9BW62 490 aa20.63■□□□□ 0.89
PTPN11-204ENST00000531326 AGXT2Q9BYV1 514 aa20.63■□□□□ 0.89
PTPN11-204ENST00000531326 MAP3K20Q9NYL2 800 aaKnown RBP20.63■□□□□ 0.89
PTPN11-204ENST00000531326 COL4A4P53420 1690 aaPredicted RBP20.62■□□□□ 0.89
PTPN11-204ENST00000531326 LCHNA4D1U4 455 aa20.62■□□□□ 0.89
PTPN11-204ENST00000531326 KIF28PB7ZC32 967 aa20.62■□□□□ 0.89
PTPN11-204ENST00000531326 TLL1O43897 1013 aa20.62■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms