RNA–Protein interactions for RNA: ENST00000530861.5

BDNF-215, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 3,918 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-215ENST00000530861 FAM178BQ8IXR5 827 aa13.92□□□□□ -0.18
BDNF-215ENST00000530861 ZNF526Q8TF50 670 aaPredicted RBP13.92□□□□□ -0.18
BDNF-215ENST00000530861 U2AF1L4Q8WU68 220 aaKnown RBP13.92□□□□□ -0.18
BDNF-215ENST00000530861 ADD3Q9UEY8 706 aaKnown RBP13.92□□□□□ -0.18
BDNF-215ENST00000530861 PCNTO95613 3336 aa13.92□□□□□ -0.18
BDNF-215ENST00000530861 HGSO14964 777 aaPredicted RBP13.92□□□□□ -0.18
BDNF-215ENST00000530861 ATP2C2O75185 946 aa13.92□□□□□ -0.18
BDNF-215ENST00000530861 NDUFA10O95299 355 aa13.92□□□□□ -0.18
BDNF-215ENST00000530861 DNM2P50570 870 aa13.92□□□□□ -0.18
BDNF-215ENST00000530861 C2orf54Q08AI8 447 aa13.92□□□□□ -0.18
BDNF-215ENST00000530861 FUT2Q10981 343 aa13.92□□□□□ -0.18
BDNF-215ENST00000530861 TMED8Q6PL24 325 aaPredicted RBP13.92□□□□□ -0.18
BDNF-215ENST00000530861 PARD6BQ9BYG5 372 aa13.92□□□□□ -0.18
BDNF-215ENST00000530861 ABHD10Q9NUJ1 306 aa13.92□□□□□ -0.18
BDNF-215ENST00000530861 RWDD2AQ9UIY3 292 aa13.92□□□□□ -0.18
BDNF-215ENST00000530861 RABGAP1Q9Y3P9 1069 aa13.92□□□□□ -0.18
BDNF-215ENST00000530861 TLDC2A0PJX2 215 aa13.91□□□□□ -0.18
BDNF-215ENST00000530861 CCNE1P24864 410 aa13.91□□□□□ -0.18
BDNF-215ENST00000530861 CDC25BP30305 580 aa13.91□□□□□ -0.18
BDNF-215ENST00000530861 KRT83P78385 493 aa13.91□□□□□ -0.18
BDNF-215ENST00000530861 RASA3Q14644 834 aa13.91□□□□□ -0.18
BDNF-215ENST00000530861 SLC35G1Q2M3R5 365 aa13.91□□□□□ -0.18
BDNF-215ENST00000530861 APOBEC3HQ6NTF7 200 aaKnown RBP13.91□□□□□ -0.18
BDNF-215ENST00000530861 NHEJ1Q9H9Q4 299 aaPredicted RBP13.91□□□□□ -0.18
BDNF-215ENST00000530861 ARMCX3Q9UH62 379 aaPredicted RBP13.91□□□□□ -0.18
BDNF-215ENST00000530861 ADGRG1Q9Y653 693 aa13.91□□□□□ -0.18
BDNF-215ENST00000530861 ESYT3A0FGR9 886 aa13.91□□□□□ -0.18
BDNF-215ENST00000530861 GOLGA6L9A6NEM1 432 aa13.91□□□□□ -0.18
BDNF-215ENST00000530861 CEP104O60308 925 aa13.91□□□□□ -0.18
BDNF-215ENST00000530861 BAG6P46379 1132 aa13.91□□□□□ -0.18
BDNF-215ENST00000530861 XKR9Q5GH70 373 aa13.91□□□□□ -0.18
BDNF-215ENST00000530861 ZNF579Q8NAF0 562 aaKnown RBP13.91□□□□□ -0.18
BDNF-215ENST00000530861 SECISBP2LQ93073 1101 aaKnown RBP13.91□□□□□ -0.18
BDNF-215ENST00000530861 MRRFQ96E11 262 aaKnown RBP13.91□□□□□ -0.18
BDNF-215ENST00000530861 IL17RAQ96F46 866 aa13.91□□□□□ -0.18
BDNF-215ENST00000530861 DYDC2Q96IM9 177 aa13.91□□□□□ -0.18
BDNF-215ENST00000530861 NKRFO15226 690 aaKnown RBP eCLIP13.91□□□□□ -0.18
BDNF-215ENST00000530861 KRT5P13647 590 aa13.91□□□□□ -0.18
BDNF-215ENST00000530861 BIRC3Q13489 604 aa13.91□□□□□ -0.18
BDNF-215ENST00000530861 GJB7Q6PEY0 223 aa13.91□□□□□ -0.18
BDNF-215ENST00000530861 MAATS1Q7Z4T9 603 aa13.91□□□□□ -0.18
BDNF-215ENST00000530861 ALS2CR12Q96Q35 445 aa13.91□□□□□ -0.18
BDNF-215ENST00000530861 LRRC53A6NM62 1247 aa13.9□□□□□ -0.18
BDNF-215ENST00000530861 ZEB2O60315 1214 aa13.9□□□□□ -0.18
BDNF-215ENST00000530861 NR1I3Q14994 352 aa13.9□□□□□ -0.18
BDNF-215ENST00000530861 HAUS3Q68CZ6 603 aa13.9□□□□□ -0.18
BDNF-215ENST00000530861 MIER3Q7Z3K6 550 aa13.9□□□□□ -0.18
BDNF-215ENST00000530861 ZKSCAN4Q969J2 545 aaPredicted RBP13.9□□□□□ -0.18
BDNF-215ENST00000530861 MED15Q96RN5 788 aa13.9□□□□□ -0.18
BDNF-215ENST00000530861 PICK1Q9NRD5 415 aa13.9□□□□□ -0.18
BDNF-215ENST00000530861 GFPT2O94808 682 aa13.9□□□□□ -0.18
BDNF-215ENST00000530861 SHMT1P34896 483 aa13.9□□□□□ -0.18
BDNF-215ENST00000530861 OSTNP61366 133 aa13.9□□□□□ -0.18
BDNF-215ENST00000530861 LMBRD2Q68DH5 695 aaPredicted RBP13.9□□□□□ -0.18
BDNF-215ENST00000530861 ZNF746Q6NUN9 644 aaPredicted RBP13.9□□□□□ -0.18
BDNF-215ENST00000530861 ZHX2Q9Y6X8 837 aa13.9□□□□□ -0.18
BDNF-215ENST00000530861 KRT13P13646 458 aa13.9□□□□□ -0.18
BDNF-215ENST00000530861 MARK3P27448 753 aa13.9□□□□□ -0.18
BDNF-215ENST00000530861 SEPT14Q6ZU15 432 aa13.9□□□□□ -0.18
BDNF-215ENST00000530861 PAXIP1Q6ZW49 1069 aaPredicted RBP13.9□□□□□ -0.18
BDNF-215ENST00000530861 CCDC17Q96LX7 622 aa13.9□□□□□ -0.18
BDNF-215ENST00000530861 XRCC5P13010 732 aaKnown RBP13.89□□□□□ -0.19
BDNF-215ENST00000530861 VPS41P49754 854 aa13.89□□□□□ -0.19
BDNF-215ENST00000530861 KCNA1Q09470 495 aa13.89□□□□□ -0.19
BDNF-215ENST00000530861 CCDC25Q86WR0 208 aa13.89□□□□□ -0.19
BDNF-215ENST00000530861 LUC7LQ9NQ29 371 aaKnown RBP13.89□□□□□ -0.19
BDNF-215ENST00000530861 MYO6Q9UM54 1294 aa13.89□□□□□ -0.19
BDNF-215ENST00000530861 SAR1BQ9Y6B6 198 aa13.89□□□□□ -0.19
BDNF-215ENST00000530861 KCPQ6ZWJ8 1503 aa13.89□□□□□ -0.19
BDNF-215ENST00000530861 K7ENM7 598 aa13.89□□□□□ -0.19
BDNF-215ENST00000530861 COASYQ13057 564 aa13.89□□□□□ -0.19
BDNF-215ENST00000530861 ARHGEF16Q5VV41 709 aa13.89□□□□□ -0.19
BDNF-215ENST00000530861 CRAMP1Q96RY5 1269 aa13.89□□□□□ -0.19
BDNF-215ENST00000530861 PRR12Q9ULL5 1215 aa13.89□□□□□ -0.19
BDNF-215ENST00000530861 ADRA2BP18089 450 aa13.89□□□□□ -0.19
BDNF-215ENST00000530861 SOX10P56693 466 aa13.89□□□□□ -0.19
BDNF-215ENST00000530861 IGBP1P78318 339 aa13.89□□□□□ -0.19
BDNF-215ENST00000530861 ARL6IP4Q66PJ3 421 aaKnown RBP13.89□□□□□ -0.19
BDNF-215ENST00000530861 KCTD16Q68DU8 428 aa13.89□□□□□ -0.19
BDNF-215ENST00000530861 PPM1KQ8N3J5 372 aa13.89□□□□□ -0.19
BDNF-215ENST00000530861 ZMYND12Q9H0C1 365 aa13.89□□□□□ -0.19
BDNF-215ENST00000530861 SFMBT2Q5VUG0 894 aa13.88□□□□□ -0.19
BDNF-215ENST00000530861 CYFIP1Q7L576 1253 aa13.88□□□□□ -0.19
BDNF-215ENST00000530861 PPP1R13LQ8WUF5 828 aa13.88□□□□□ -0.19
BDNF-215ENST00000530861 KIFC3Q9BVG8 833 aa13.88□□□□□ -0.19
BDNF-215ENST00000530861 AFDNP55196 1824 aaKnown RBP13.88□□□□□ -0.19
BDNF-215ENST00000530861 OAS2P29728 719 aaKnown RBP13.88□□□□□ -0.19
BDNF-215ENST00000530861 SLC9C1Q4G0N8 1177 aa13.88□□□□□ -0.19
BDNF-215ENST00000530861 SND1Q7KZF4 910 aaKnown RBP eCLIP13.88□□□□□ -0.19
BDNF-215ENST00000530861 ADSSL1Q8N142 457 aa13.88□□□□□ -0.19
BDNF-215ENST00000530861 PDE11AQ9HCR9 933 aa13.88□□□□□ -0.19
BDNF-215ENST00000530861 COL1A1P02452 1464 aaPredicted RBP13.88□□□□□ -0.19
BDNF-215ENST00000530861 KCNK3O14649 394 aa13.88□□□□□ -0.19
BDNF-215ENST00000530861 KIF20AO95235 890 aa13.88□□□□□ -0.19
BDNF-215ENST00000530861 EPB41P11171 864 aaKnown RBP13.88□□□□□ -0.19
BDNF-215ENST00000530861 NF2P35240 595 aa13.88□□□□□ -0.19
BDNF-215ENST00000530861 PPP4CP60510 307 aa13.88□□□□□ -0.19
BDNF-215ENST00000530861 ERVK-24P63145 666 aa13.88□□□□□ -0.19
BDNF-215ENST00000530861 TMEM179Q6ZVK1 233 aa13.88□□□□□ -0.19
BDNF-215ENST00000530861 CHURC1Q8WUH1 139 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms