RNA–Protein interactions for RNA: ENST00000529553.1

AMBRA1-207, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 3

Gene AMBRA1, Length 586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-207ENST00000529553 PPARAQ07869 468 aa13.7□□□□□ -0.22
AMBRA1-207ENST00000529553 SIGLEC14Q08ET2 396 aa13.7□□□□□ -0.22
AMBRA1-207ENST00000529553 STXBP2Q15833 593 aa13.7□□□□□ -0.22
AMBRA1-207ENST00000529553 CLUL1Q15846 466 aa13.7□□□□□ -0.22
AMBRA1-207ENST00000529553 KIAA0753Q2KHM9 967 aa13.7□□□□□ -0.22
AMBRA1-207ENST00000529553 CCDC96Q2M329 555 aa13.7□□□□□ -0.22
AMBRA1-207ENST00000529553 TTBK2Q6IQ55 1244 aa13.7□□□□□ -0.22
AMBRA1-207ENST00000529553 SERINC5Q86VE9 423 aa13.7□□□□□ -0.22
AMBRA1-207ENST00000529553 FIBCD1Q8N539 461 aa13.7□□□□□ -0.22
AMBRA1-207ENST00000529553 PPTC7Q8NI37 304 aa13.7□□□□□ -0.22
AMBRA1-207ENST00000529553 WNT8BQ93098 351 aa13.7□□□□□ -0.22
AMBRA1-207ENST00000529553 MSLNLQ96KJ4 702 aa13.7□□□□□ -0.22
AMBRA1-207ENST00000529553 ALG1Q9BT22 464 aa13.7□□□□□ -0.22
AMBRA1-207ENST00000529553 TRIP12Q14669 1992 aaPredicted RBP13.7□□□□□ -0.22
AMBRA1-207ENST00000529553 HOXD8P13378 290 aaPredicted RBP13.69□□□□□ -0.22
AMBRA1-207ENST00000529553 THPOP40225 353 aa13.69□□□□□ -0.22
AMBRA1-207ENST00000529553 SIRT2Q8IXJ6 389 aa13.69□□□□□ -0.22
AMBRA1-207ENST00000529553 NSUN6Q8TEA1 469 aaKnown RBP13.69□□□□□ -0.22
AMBRA1-207ENST00000529553 APBB2Q92870 758 aa13.69□□□□□ -0.22
AMBRA1-207ENST00000529553 PPP2R3CQ969Q6 453 aa13.69□□□□□ -0.22
AMBRA1-207ENST00000529553 NAPBQ9H115 298 aa13.69□□□□□ -0.22
AMBRA1-207ENST00000529553 BCL11AQ9H165 835 aa13.69□□□□□ -0.22
AMBRA1-207ENST00000529553 ECHDC1Q9NTX5 307 aa13.69□□□□□ -0.22
AMBRA1-207ENST00000529553 DDX41Q9UJV9 622 aaKnown RBP13.69□□□□□ -0.22
AMBRA1-207ENST00000529553 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.69□□□□□ -0.22
AMBRA1-207ENST00000529553 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.68□□□□□ -0.22
AMBRA1-207ENST00000529553 GRM6O15303 877 aa13.68□□□□□ -0.22
AMBRA1-207ENST00000529553 UPP2O95045 317 aa13.68□□□□□ -0.22
AMBRA1-207ENST00000529553 CTNNB1P35222 781 aa13.68□□□□□ -0.22
AMBRA1-207ENST00000529553 ZNF200P98182 395 aaPredicted RBP13.68□□□□□ -0.22
AMBRA1-207ENST00000529553 COASYQ13057 564 aa13.68□□□□□ -0.22
AMBRA1-207ENST00000529553 SEPT14Q6ZU15 432 aa13.68□□□□□ -0.22
AMBRA1-207ENST00000529553 CHST3Q7LGC8 479 aa13.68□□□□□ -0.22
AMBRA1-207ENST00000529553 DHX37Q8IY37 1157 aaKnown RBP13.68□□□□□ -0.22
AMBRA1-207ENST00000529553 CLP1Q92989 425 aaKnown RBP13.68□□□□□ -0.22
AMBRA1-207ENST00000529553 PLVAPQ9BX97 442 aa13.68□□□□□ -0.22
AMBRA1-207ENST00000529553 IFIH1Q9BYX4 1025 aaKnown RBP13.68□□□□□ -0.22
AMBRA1-207ENST00000529553 FAM86C1Q9NVL1 165 aa13.68□□□□□ -0.22
AMBRA1-207ENST00000529553 LCTP09848 1927 aa13.68□□□□□ -0.22
AMBRA1-207ENST00000529553 NMT2O60551 498 aa13.67□□□□□ -0.22
AMBRA1-207ENST00000529553 TBX10O75333 385 aa13.67□□□□□ -0.22
AMBRA1-207ENST00000529553 EIF3JO75822 258 aaKnown RBP13.67□□□□□ -0.22
AMBRA1-207ENST00000529553 NAALADL2Q58DX5 795 aa13.67□□□□□ -0.22
AMBRA1-207ENST00000529553 SMRP1Q8NCR6 262 aa13.67□□□□□ -0.22
AMBRA1-207ENST00000529553 ASIC4Q96FT7 647 aa13.67□□□□□ -0.22
AMBRA1-207ENST00000529553 LRRCC1Q9C099 1032 aa13.67□□□□□ -0.22
AMBRA1-207ENST00000529553 IGFLR1Q9H665 355 aa13.67□□□□□ -0.22
AMBRA1-207ENST00000529553 CACNA1HO95180 2353 aa13.66□□□□□ -0.22
AMBRA1-207ENST00000529553 PTPRZ1P23471 2315 aaPredicted RBP13.66□□□□□ -0.22
AMBRA1-207ENST00000529553 M0R2C6 588 aa13.66□□□□□ -0.22
AMBRA1-207ENST00000529553 MMP1P03956 469 aa13.66□□□□□ -0.22
AMBRA1-207ENST00000529553 LINC00271P0C7V0 271 aa13.66□□□□□ -0.22
AMBRA1-207ENST00000529553 TOP1P11387 765 aaKnown RBP13.66□□□□□ -0.22
AMBRA1-207ENST00000529553 MS4A1P11836 297 aa13.66□□□□□ -0.22
AMBRA1-207ENST00000529553 NDUFV1P49821 464 aa13.66□□□□□ -0.22
AMBRA1-207ENST00000529553 HIC1Q14526 733 aa13.66□□□□□ -0.22
AMBRA1-207ENST00000529553 KCNV1Q6PIU1 500 aa13.66□□□□□ -0.22
AMBRA1-207ENST00000529553 RASGRP2Q7LDG7 609 aa13.66□□□□□ -0.22
AMBRA1-207ENST00000529553 EFHBQ8N7U6 833 aa13.66□□□□□ -0.22
AMBRA1-207ENST00000529553 FSD1Q9BTV5 496 aa13.66□□□□□ -0.22
AMBRA1-207ENST00000529553 PHF7Q9BWX1 381 aaPredicted RBP13.66□□□□□ -0.22
AMBRA1-207ENST00000529553 GPCPD1Q9NPB8 672 aa13.66□□□□□ -0.22
AMBRA1-207ENST00000529553 TCP11L1Q9NUJ3 509 aa13.66□□□□□ -0.22
AMBRA1-207ENST00000529553 ANAPC4Q9UJX5 808 aa13.66□□□□□ -0.22
AMBRA1-207ENST00000529553 MTMR7Q9Y216 660 aa13.66□□□□□ -0.22
AMBRA1-207ENST00000529553 C17orf102A2RUQ5 167 aa13.65□□□□□ -0.22
AMBRA1-207ENST00000529553 LINC01565O15544 149 aa13.65□□□□□ -0.22
AMBRA1-207ENST00000529553 ORC4O43929 436 aa13.65□□□□□ -0.22
AMBRA1-207ENST00000529553 RANBP6O60518 1105 aaKnown RBP13.65□□□□□ -0.22
AMBRA1-207ENST00000529553 FGRP09769 529 aa13.65□□□□□ -0.22
AMBRA1-207ENST00000529553 HOXC8P31273 242 aa13.65□□□□□ -0.22
AMBRA1-207ENST00000529553 ICAM3P32942 547 aa13.65□□□□□ -0.22
AMBRA1-207ENST00000529553 NBL1P41271 181 aa13.65□□□□□ -0.22
AMBRA1-207ENST00000529553 VCPP55072 806 aaKnown RBP13.65□□□□□ -0.22
AMBRA1-207ENST00000529553 RRP1P56182 461 aaKnown RBP13.65□□□□□ -0.22
AMBRA1-207ENST00000529553 MCF2L2Q86YR7 1114 aa13.65□□□□□ -0.22
AMBRA1-207ENST00000529553 ATP6V0A1Q93050 837 aa13.65□□□□□ -0.22
AMBRA1-207ENST00000529553 P2RX5Q93086 422 aa13.65□□□□□ -0.22
AMBRA1-207ENST00000529553 TAAR1Q96RJ0 339 aa13.65□□□□□ -0.22
AMBRA1-207ENST00000529553 TMEM47Q9BQJ4 181 aa13.65□□□□□ -0.22
AMBRA1-207ENST00000529553 ZBTB40Q9NUA8 1239 aa13.65□□□□□ -0.22
AMBRA1-207ENST00000529553 CLEC1BQ9P126 229 aa13.65□□□□□ -0.22
AMBRA1-207ENST00000529553 TRPC6Q9Y210 931 aa13.65□□□□□ -0.22
AMBRA1-207ENST00000529553 C5orf42Q9H799 3197 aa13.65□□□□□ -0.22
AMBRA1-207ENST00000529553 SPTBN4Q9H254 2564 aa13.65□□□□□ -0.22
AMBRA1-207ENST00000529553 H0Y858 1186 aa13.64□□□□□ -0.23
AMBRA1-207ENST00000529553 GALR2O43603 387 aaPredicted RBP13.64□□□□□ -0.23
AMBRA1-207ENST00000529553 ZNF286BP0CG31 522 aa13.64□□□□□ -0.23
AMBRA1-207ENST00000529553 PDHBP11177 359 aa13.64□□□□□ -0.23
AMBRA1-207ENST00000529553 ATF7P17544 494 aaPredicted RBP13.64□□□□□ -0.23
AMBRA1-207ENST00000529553 GTF2F1P35269 517 aaKnown RBP eCLIP13.64□□□□□ -0.23
AMBRA1-207ENST00000529553 ID4P47928 161 aa13.64□□□□□ -0.23
AMBRA1-207ENST00000529553 MYSM1Q5VVJ2 828 aa13.64□□□□□ -0.23
AMBRA1-207ENST00000529553 ASCL5Q7RTU5 278 aa13.64□□□□□ -0.23
AMBRA1-207ENST00000529553 SYTL5Q8TDW5 730 aaPredicted RBP13.64□□□□□ -0.23
AMBRA1-207ENST00000529553 PANK1Q8TE04 598 aa13.64□□□□□ -0.23
AMBRA1-207ENST00000529553 GPATCH3Q96I76 525 aa13.64□□□□□ -0.23
AMBRA1-207ENST00000529553 TTC14Q96N46 770 aa13.64□□□□□ -0.23
AMBRA1-207ENST00000529553 RMDN3Q96TC7 470 aa13.64□□□□□ -0.23
AMBRA1-207ENST00000529553 TLR9Q9NR96 1032 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms