RNA–Protein interactions for RNA: ENST00000528840.1

PTP4A2-211, Transcript of protein tyrosine phosphatase type IVA, member 2, human

TSL 2

Gene PTP4A2, Length 456 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTP4A2-211	ENST00000528840	IFIT1B	Q5T764	474 aa	Known RBP	13.23	□□□□□ -0.29
PTP4A2-211	ENST00000528840	MYSM1	Q5VVJ2	828 aa		13.23	□□□□□ -0.29
PTP4A2-211	ENST00000528840	PPTC7	Q8NI37	304 aa		13.23	□□□□□ -0.29
PTP4A2-211	ENST00000528840	SPATA33	Q96N06	139 aa		13.23	□□□□□ -0.29
PTP4A2-211	ENST00000528840	DSCC1	Q9BVC3	393 aa		13.23	□□□□□ -0.29
PTP4A2-211	ENST00000528840	C1QTNF1	Q9BXJ1	281 aa		13.23	□□□□□ -0.29
PTP4A2-211	ENST00000528840	OSBPL3	Q9H4L5	887 aa		13.23	□□□□□ -0.29
PTP4A2-211	ENST00000528840	EPHX3	Q9H6B9	360 aa		13.23	□□□□□ -0.29
PTP4A2-211	ENST00000528840	SUGCT	Q9HAC7	445 aa		13.23	□□□□□ -0.29
PTP4A2-211	ENST00000528840	PCDHA1	Q9Y5I3	950 aa		13.23	□□□□□ -0.29
PTP4A2-211	ENST00000528840	OPLAH	O14841	1288 aa		13.22	□□□□□ -0.29
PTP4A2-211	ENST00000528840	PPP1R11	O60927	126 aa	Predicted RBP	13.22	□□□□□ -0.29
PTP4A2-211	ENST00000528840	GJB5	O95377	273 aa		13.22	□□□□□ -0.29
PTP4A2-211	ENST00000528840	HSD17B4	P51659	736 aa		13.22	□□□□□ -0.29
PTP4A2-211	ENST00000528840	SP2	Q02086	613 aa		13.22	□□□□□ -0.29
PTP4A2-211	ENST00000528840	RBL2	Q08999	1139 aa		13.22	□□□□□ -0.29
PTP4A2-211	ENST00000528840	HIC1	Q14526	733 aa		13.22	□□□□□ -0.29
PTP4A2-211	ENST00000528840	CELF3	Q5SZQ8	465 aa	Known RBP	13.22	□□□□□ -0.29
PTP4A2-211	ENST00000528840	KCNV1	Q6PIU1	500 aa		13.22	□□□□□ -0.29
PTP4A2-211	ENST00000528840	LIN28B	Q6ZN17	250 aa	Known RBP eCLIP	13.22	□□□□□ -0.29
PTP4A2-211	ENST00000528840	STOX1	Q6ZVD7	989 aa		13.22	□□□□□ -0.29
PTP4A2-211	ENST00000528840	VSIG10L	Q86VR7	867 aa		13.22	□□□□□ -0.29
PTP4A2-211	ENST00000528840	GDPD5	Q8WTR4	605 aa		13.22	□□□□□ -0.29
PTP4A2-211	ENST00000528840	WNT8B	Q93098	351 aa		13.22	□□□□□ -0.29
PTP4A2-211	ENST00000528840	PDCD2L	Q9BRP1	358 aa		13.22	□□□□□ -0.29
PTP4A2-211	ENST00000528840	CNNM2	Q9H8M5	875 aa		13.22	□□□□□ -0.29
PTP4A2-211	ENST00000528840	MLXIP	Q9HAP2	919 aa		13.22	□□□□□ -0.29
PTP4A2-211	ENST00000528840	MAP3K20	Q9NYL2	800 aa	Known RBP	13.22	□□□□□ -0.29
PTP4A2-211	ENST00000528840	PRRC2B	Q5JSZ5	2229 aa	Known RBP	13.22	□□□□□ -0.29
PTP4A2-211	ENST00000528840	RGS20	O76081	388 aa		13.21	□□□□□ -0.29
PTP4A2-211	ENST00000528840	GGPS1	O95749	300 aa		13.21	□□□□□ -0.29
PTP4A2-211	ENST00000528840	F2	P00734	622 aa		13.21	□□□□□ -0.29
PTP4A2-211	ENST00000528840	THPO	P40225	353 aa		13.21	□□□□□ -0.29
PTP4A2-211	ENST00000528840	ERVK-21	P61565	698 aa		13.21	□□□□□ -0.29
PTP4A2-211	ENST00000528840	TRIM71	Q2Q1W2	868 aa	Known RBP	13.21	□□□□□ -0.29
PTP4A2-211	ENST00000528840	HSDL1	Q3SXM5	330 aa		13.21	□□□□□ -0.29
PTP4A2-211	ENST00000528840	TRAF7	Q6Q0C0	670 aa		13.21	□□□□□ -0.29
PTP4A2-211	ENST00000528840	CYB5R4	Q7L1T6	521 aa		13.21	□□□□□ -0.29
PTP4A2-211	ENST00000528840	FCHSD1	Q86WN1	690 aa		13.21	□□□□□ -0.29
PTP4A2-211	ENST00000528840	HOMER1	Q86YM7	354 aa		13.21	□□□□□ -0.29
PTP4A2-211	ENST00000528840	TGS1	Q96RS0	853 aa	Known RBP	13.21	□□□□□ -0.29
PTP4A2-211	ENST00000528840	LMCD1	Q9NZU5	365 aa		13.21	□□□□□ -0.29
PTP4A2-211	ENST00000528840	MAD2L2	Q9UI95	211 aa		13.21	□□□□□ -0.29
PTP4A2-211	ENST00000528840	TTC28	Q96AY4	2481 aa		13.2	□□□□□ -0.3
PTP4A2-211	ENST00000528840	LINC01553	A4QN01	128 aa		13.2	□□□□□ -0.3
PTP4A2-211	ENST00000528840	PALM3	A6NDB9	673 aa	Predicted RBP	13.2	□□□□□ -0.3
PTP4A2-211	ENST00000528840	RSPH10B2	B2RC85	870 aa		13.2	□□□□□ -0.3
PTP4A2-211	ENST00000528840	GCOM1	H8Y6P7	765 aa	Predicted RBP	13.2	□□□□□ -0.3
PTP4A2-211	ENST00000528840	ZBTB5	O15062	677 aa		13.2	□□□□□ -0.3
PTP4A2-211	ENST00000528840	EFCAB14	O75071	495 aa		13.2	□□□□□ -0.3
PTP4A2-211	ENST00000528840	LGR5	O75473	907 aa		13.2	□□□□□ -0.3
PTP4A2-211	ENST00000528840	RSPH10B	P0C881	870 aa		13.2	□□□□□ -0.3
PTP4A2-211	ENST00000528840	POLR2M	P0CAP2	368 aa		13.2	□□□□□ -0.3
PTP4A2-211	ENST00000528840	TGFB3	P10600	412 aa		13.2	□□□□□ -0.3
PTP4A2-211	ENST00000528840	AAMP	Q13685	434 aa		13.2	□□□□□ -0.3
PTP4A2-211	ENST00000528840	MBTPS1	Q14703	1052 aa		13.2	□□□□□ -0.3
PTP4A2-211	ENST00000528840	PGM5	Q15124	567 aa		13.2	□□□□□ -0.3
PTP4A2-211	ENST00000528840	SEC23A	Q15436	765 aa		13.2	□□□□□ -0.3
PTP4A2-211	ENST00000528840	DBF4B	Q8NFT6	615 aa		13.2	□□□□□ -0.3
PTP4A2-211	ENST00000528840	GPKOW	Q92917	476 aa	Predicted RBP eCLIP	13.2	□□□□□ -0.3	3e-6	■■■□□ 17.8
PTP4A2-211	ENST00000528840	MTMR8	Q96EF0	704 aa		13.2	□□□□□ -0.3
PTP4A2-211	ENST00000528840	PIGS	Q96S52	555 aa		13.2	□□□□□ -0.3
PTP4A2-211	ENST00000528840	C16orf70	Q9BSU1	422 aa		13.2	□□□□□ -0.3
PTP4A2-211	ENST00000528840	BCAS3	Q9H6U6	928 aa		13.2	□□□□□ -0.3
PTP4A2-211	ENST00000528840	CHD7	Q9P2D1	2997 aa		13.2	□□□□□ -0.3
PTP4A2-211	ENST00000528840	MYH7B	A7E2Y1	1941 aa		13.19	□□□□□ -0.3
PTP4A2-211	ENST00000528840		H3BRB1	525 aa		13.19	□□□□□ -0.3
PTP4A2-211	ENST00000528840	AMH	P03971	560 aa		13.19	□□□□□ -0.3
PTP4A2-211	ENST00000528840	CCND2	P30279	289 aa		13.19	□□□□□ -0.3
PTP4A2-211	ENST00000528840	GHRHR	Q02643	423 aa		13.19	□□□□□ -0.3
PTP4A2-211	ENST00000528840	SAMD3	Q8N6K7	520 aa		13.19	□□□□□ -0.3
PTP4A2-211	ENST00000528840	IL31RA	Q8NI17	732 aa		13.19	□□□□□ -0.3
PTP4A2-211	ENST00000528840	ATP6V0A1	Q93050	837 aa		13.19	□□□□□ -0.3
PTP4A2-211	ENST00000528840	FAM122A	Q96E09	287 aa		13.19	□□□□□ -0.3
PTP4A2-211	ENST00000528840	LRFN3	Q9BTN0	628 aa		13.19	□□□□□ -0.3
PTP4A2-211	ENST00000528840	TUT1	Q9H6E5	874 aa	Known RBP	13.19	□□□□□ -0.3
PTP4A2-211	ENST00000528840	RTEL1	Q9NZ71	1219 aa		13.19	□□□□□ -0.3
PTP4A2-211	ENST00000528840	SSUH2	Q9Y2M2	353 aa		13.19	□□□□□ -0.3
PTP4A2-211	ENST00000528840	INSL6	Q9Y581	213 aa		13.19	□□□□□ -0.3
PTP4A2-211	ENST00000528840	KIAA1217	Q5T5P2	1943 aa		13.19	□□□□□ -0.3
PTP4A2-211	ENST00000528840	C17orf102	A2RUQ5	167 aa		13.18	□□□□□ -0.3
PTP4A2-211	ENST00000528840	IFIT3	O14879	490 aa	Known RBP	13.18	□□□□□ -0.3
PTP4A2-211	ENST00000528840	HOXD8	P13378	290 aa	Predicted RBP	13.18	□□□□□ -0.3
PTP4A2-211	ENST00000528840	TRDN	Q13061	729 aa		13.18	□□□□□ -0.3
PTP4A2-211	ENST00000528840	TRAF1	Q13077	416 aa		13.18	□□□□□ -0.3
PTP4A2-211	ENST00000528840	SLC35G1	Q2M3R5	365 aa		13.18	□□□□□ -0.3
PTP4A2-211	ENST00000528840	SERINC5	Q86VE9	423 aa		13.18	□□□□□ -0.3
PTP4A2-211	ENST00000528840	MYOCD	Q8IZQ8	938 aa		13.18	□□□□□ -0.3
PTP4A2-211	ENST00000528840	EXOC6	Q8TAG9	804 aa		13.18	□□□□□ -0.3
PTP4A2-211	ENST00000528840	PIBF1	Q8WXW3	757 aa		13.18	□□□□□ -0.3
PTP4A2-211	ENST00000528840	C17orf80	Q9BSJ5	609 aa		13.18	□□□□□ -0.3
PTP4A2-211	ENST00000528840	IL25	Q9H293	177 aa		13.18	□□□□□ -0.3
PTP4A2-211	ENST00000528840	RNPEP	Q9H4A4	650 aa		13.18	□□□□□ -0.3
PTP4A2-211	ENST00000528840	RIOX1	Q9H6W3	641 aa		13.18	□□□□□ -0.3
PTP4A2-211	ENST00000528840	EMSY	Q7Z589	1322 aa		13.17	□□□□□ -0.3
PTP4A2-211	ENST00000528840	TANC1	Q9C0D5	1861 aa		13.17	□□□□□ -0.3
PTP4A2-211	ENST00000528840	PPAN-P2RY11	A0A0B4J1V8	794 aa	Predicted RBP	13.17	□□□□□ -0.3
PTP4A2-211	ENST00000528840	PNMA6F	A0A0J9YX94	578 aa		13.17	□□□□□ -0.3
PTP4A2-211	ENST00000528840	NOP56	O00567	594 aa	Known RBP	13.17	□□□□□ -0.3
PTP4A2-211	ENST00000528840	TREH	O43280	583 aa		13.17	□□□□□ -0.3

Retrieved 100 of 20,778 RNA–protein pairs in 41 ms