RNA–Protein interactions for RNA: ENST00000527720.5

USH1C-207, Transcript of USH1 protein network component harmonin, humanhuman

TSL 1 (best) BASIC

Gene USH1C, Length 2,278 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-207ENST00000527720 ARHGAP27Q6ZUM4 889 aa17.05■□□□□ 0.32
USH1C-207ENST00000527720 FBXO11Q86XK2 927 aa17.05■□□□□ 0.32
USH1C-207ENST00000527720 CCDC65Q8IXS2 484 aa17.05■□□□□ 0.32
USH1C-207ENST00000527720 EEF2KMTQ96G04 330 aa17.05■□□□□ 0.32
USH1C-207ENST00000527720 NHEJ1Q9H9Q4 299 aaPredicted RBP17.05■□□□□ 0.32
USH1C-207ENST00000527720 PANK4Q9NVE7 773 aa17.05■□□□□ 0.32
USH1C-207ENST00000527720 SIK3Q9Y2K2 1263 aa17.05■□□□□ 0.32
USH1C-207ENST00000527720 KRT86O43790 486 aa17.05■□□□□ 0.32
USH1C-207ENST00000527720 ABL1P00519 1130 aa17.05■□□□□ 0.32
USH1C-207ENST00000527720 HERVK_113P62684 666 aa17.05■□□□□ 0.32
USH1C-207ENST00000527720 ZCWPW2Q504Y3 356 aa17.05■□□□□ 0.32
USH1C-207ENST00000527720 FAM26FQ5R3K3 315 aa17.05■□□□□ 0.32
USH1C-207ENST00000527720 RBM26Q5T8P6 1007 aaKnown RBP17.05■□□□□ 0.32
USH1C-207ENST00000527720 UTP14CQ5TAP6 766 aaKnown RBP17.05■□□□□ 0.32
USH1C-207ENST00000527720 SYDE2Q5VT97 1194 aa17.05■□□□□ 0.32
USH1C-207ENST00000527720 EDEM3Q9BZQ6 932 aa17.05■□□□□ 0.32
USH1C-207ENST00000527720 PITPNM2Q9BZ72 1349 aa17.05■□□□□ 0.32
USH1C-207ENST00000527720 NDUFB10O96000 172 aa17.04■□□□□ 0.32
USH1C-207ENST00000527720 PNMA6AP0CW24 399 aaPredicted RBP17.04■□□□□ 0.32
USH1C-207ENST00000527720 ARHGAP4P98171 946 aa17.04■□□□□ 0.32
USH1C-207ENST00000527720 FKBP3Q00688 224 aaKnown RBP17.04■□□□□ 0.32
USH1C-207ENST00000527720 AOC3Q16853 763 aa17.04■□□□□ 0.32
USH1C-207ENST00000527720 PLAGL2Q9UPG8 496 aa17.04■□□□□ 0.32
USH1C-207ENST00000527720 KIAA1024Q9UPX6 916 aa17.04■□□□□ 0.32
USH1C-207ENST00000527720 PLA2G4BP0C869 781 aa17.04■□□□□ 0.32
USH1C-207ENST00000527720 BMP3P12645 472 aa17.04■□□□□ 0.32
USH1C-207ENST00000527720 KLK7P49862 253 aa17.04■□□□□ 0.32
USH1C-207ENST00000527720 AMPD2Q01433 879 aa17.04■□□□□ 0.32
USH1C-207ENST00000527720 TRAF1Q13077 416 aa17.04■□□□□ 0.32
USH1C-207ENST00000527720 SHROOM1Q2M3G4 852 aaPredicted RBP17.04■□□□□ 0.32
USH1C-207ENST00000527720 ETNPPLQ8TBG4 499 aa17.04■□□□□ 0.32
USH1C-207ENST00000527720 CEP63Q96MT8 703 aa17.04■□□□□ 0.32
USH1C-207ENST00000527720 PARD6BQ9BYG5 372 aa17.04■□□□□ 0.32
USH1C-207ENST00000527720 TDRD3Q9H7E2 651 aaKnown RBP17.04■□□□□ 0.32
USH1C-207ENST00000527720 HERC5Q9UII4 1024 aaKnown RBP17.04■□□□□ 0.32
USH1C-207ENST00000527720 GUCA1BQ9UMX6 200 aa17.04■□□□□ 0.32
USH1C-207ENST00000527720 SREBF1P36956 1147 aa17.03■□□□□ 0.32
USH1C-207ENST00000527720 DMTNQ08495 405 aa17.03■□□□□ 0.32
USH1C-207ENST00000527720 BRD3Q15059 726 aa17.03■□□□□ 0.32
USH1C-207ENST00000527720 GRIPAP1Q4V328 841 aa17.03■□□□□ 0.32
USH1C-207ENST00000527720 CCDC122Q5T0U0 273 aa17.03■□□□□ 0.32
USH1C-207ENST00000527720 CC2D1AQ6P1N0 951 aaPredicted RBP17.03■□□□□ 0.32
USH1C-207ENST00000527720 KIAA1328Q86T90 577 aa17.03■□□□□ 0.32
USH1C-207ENST00000527720 ERMNQ8TAM6 284 aa17.03■□□□□ 0.32
USH1C-207ENST00000527720 FAM20AQ96MK3 541 aa17.03■□□□□ 0.32
USH1C-207ENST00000527720 MYO6Q9UM54 1294 aa17.03■□□□□ 0.32
USH1C-207ENST00000527720 FRMD3A2A2Y4 597 aa17.03■□□□□ 0.32
USH1C-207ENST00000527720 CCDC151A5D8V7 595 aa17.03■□□□□ 0.32
USH1C-207ENST00000527720 SPDYE3A6NKU9 549 aa17.03■□□□□ 0.32
USH1C-207ENST00000527720 GDF11O95390 407 aa17.03■□□□□ 0.32
USH1C-207ENST00000527720 GNA14O95837 355 aa17.03■□□□□ 0.32
USH1C-207ENST00000527720 CIITAP33076 1130 aa17.03■□□□□ 0.32
USH1C-207ENST00000527720 JAKMIP2Q96AA8 810 aa17.03■□□□□ 0.32
USH1C-207ENST00000527720 TSGA10Q9BZW7 698 aa17.03■□□□□ 0.32
USH1C-207ENST00000527720 COL4A3BPQ9Y5P4 624 aa17.03■□□□□ 0.32
USH1C-207ENST00000527720 KIF13BQ9NQT8 1826 aa17.02■□□□□ 0.32
USH1C-207ENST00000527720 E9PMD0 336 aa17.02■□□□□ 0.32
USH1C-207ENST00000527720 SPIRE1Q08AE8 756 aa17.02■□□□□ 0.32
USH1C-207ENST00000527720 KCTD17Q8N5Z5 321 aa17.02■□□□□ 0.32
USH1C-207ENST00000527720 MSANTD4Q8NCY6 345 aa17.02■□□□□ 0.32
USH1C-207ENST00000527720 GJA10Q969M2 543 aa17.02■□□□□ 0.32
USH1C-207ENST00000527720 ARFGAP3Q9NP61 516 aa17.02■□□□□ 0.32
USH1C-207ENST00000527720 PCDHA2Q9Y5H9 948 aa17.02■□□□□ 0.32
USH1C-207ENST00000527720 POTEB3A0JP26 581 aa17.01■□□□□ 0.31
USH1C-207ENST00000527720 CTAGE15A4D2H0 777 aa17.01■□□□□ 0.31
USH1C-207ENST00000527720 POTECB2RU33 542 aa17.01■□□□□ 0.31
USH1C-207ENST00000527720 GH2P01242 217 aa17.01■□□□□ 0.31
USH1C-207ENST00000527720 TUBBP07437 444 aa17.01■□□□□ 0.31
USH1C-207ENST00000527720 CTAGE8P0CG41 777 aa17.01■□□□□ 0.31
USH1C-207ENST00000527720 CYP11B2P19099 503 aa17.01■□□□□ 0.31
USH1C-207ENST00000527720 CHRNA5P30532 468 aa17.01■□□□□ 0.31
USH1C-207ENST00000527720 MARSP56192 900 aaKnown RBP17.01■□□□□ 0.31
USH1C-207ENST00000527720 POTEBQ6S5H4 581 aa17.01■□□□□ 0.31
USH1C-207ENST00000527720 PPP4R3CPQ6ZMV5 832 aa17.01■□□□□ 0.31
USH1C-207ENST00000527720 CTAGE6Q86UF2 777 aa17.01■□□□□ 0.31
USH1C-207ENST00000527720 GPBP1Q86WP2 473 aa17.01■□□□□ 0.31
USH1C-207ENST00000527720 CTAGE4Q8IX94 777 aa17.01■□□□□ 0.31
USH1C-207ENST00000527720 CSRNP1Q96S65 589 aa17.01■□□□□ 0.31
USH1C-207ENST00000527720 PIK3CDO00329 1044 aa17.01■□□□□ 0.31
USH1C-207ENST00000527720 NKRFO15226 690 aaKnown RBP eCLIP17.01■□□□□ 0.31
USH1C-207ENST00000527720 RPA1P27694 616 aa17.01■□□□□ 0.31
USH1C-207ENST00000527720 SLC12A3P55017 1021 aa17.01■□□□□ 0.31
USH1C-207ENST00000527720 FAM193AP78312 1265 aa17.01■□□□□ 0.31
USH1C-207ENST00000527720 IKQ13123 557 aaPredicted RBP17.01■□□□□ 0.31
USH1C-207ENST00000527720 LRRC41Q15345 812 aa17.01■□□□□ 0.31
USH1C-207ENST00000527720 TRAPPC11Q7Z392 1133 aa17.01■□□□□ 0.31
USH1C-207ENST00000527720 HNRNPLLQ8WVV9 542 aaKnown RBP17.01■□□□□ 0.31
USH1C-207ENST00000527720 PRMT6Q96LA8 375 aaPredicted RBP17.01■□□□□ 0.31
USH1C-207ENST00000527720 CCDC42Q96M95 316 aa17.01■□□□□ 0.31
USH1C-207ENST00000527720 PURBQ96QR8 312 aaKnown RBP17.01■□□□□ 0.31
USH1C-207ENST00000527720 PRDM10Q9NQV6 1147 aa17.01■□□□□ 0.31
USH1C-207ENST00000527720 TMOD2Q9NZR1 351 aa17.01■□□□□ 0.31
USH1C-207ENST00000527720 PUF60Q9UHX1 559 aaKnown RBP17.01■□□□□ 0.31
USH1C-207ENST00000527720 RAB21Q9UL25 225 aa17.01■□□□□ 0.31
USH1C-207ENST00000527720 ANO9A1A5B4 782 aa17■□□□□ 0.31
USH1C-207ENST00000527720 MED24O75448 989 aa17■□□□□ 0.31
USH1C-207ENST00000527720 LCA5LO95447 670 aa17■□□□□ 0.31
USH1C-207ENST00000527720 SSBP05455 408 aaKnown RBP eCLIP17■□□□□ 0.31
USH1C-207ENST00000527720 CYP3A4P08684 503 aa17■□□□□ 0.31
USH1C-207ENST00000527720 VAV2P52735 878 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 90.8 ms