RNA–Protein interactions for RNA: ENST00000527680.1

TRAPPC4-208, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 569 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-208ENST00000527680 MAP4K1Q92918 833 aa25.9■■□□□ 1.74
TRAPPC4-208ENST00000527680 TSPYL2Q9H2G4 693 aaPredicted RBP25.9■■□□□ 1.74
TRAPPC4-208ENST00000527680 THEGQ9P2T0 379 aa25.9■■□□□ 1.74
TRAPPC4-208ENST00000527680 BAIAP3O94812 1187 aa25.89■■□□□ 1.74
TRAPPC4-208ENST00000527680 HSDL1Q3SXM5 330 aa25.89■■□□□ 1.74
TRAPPC4-208ENST00000527680 IGDCC4Q8TDY8 1250 aa25.89■■□□□ 1.74
TRAPPC4-208ENST00000527680 ATXN2LQ8WWM7 1075 aaKnown RBP25.89■■□□□ 1.74
TRAPPC4-208ENST00000527680 CTAGE1Q96RT6 745 aa25.89■■□□□ 1.74
TRAPPC4-208ENST00000527680 ZBED2Q9BTP6 218 aa25.89■■□□□ 1.74
TRAPPC4-208ENST00000527680 PARNO95453 639 aaKnown RBP25.88■■□□□ 1.73
TRAPPC4-208ENST00000527680 F2P00734 622 aa25.88■■□□□ 1.73
TRAPPC4-208ENST00000527680 CKBP12277 381 aa25.88■■□□□ 1.73
TRAPPC4-208ENST00000527680 SP2Q02086 613 aa25.88■■□□□ 1.73
TRAPPC4-208ENST00000527680 CASC1Q6TDU7 716 aa25.88■■□□□ 1.73
TRAPPC4-208ENST00000527680 CTCFLQ8NI51 663 aaPredicted RBP25.88■■□□□ 1.73
TRAPPC4-208ENST00000527680 DHX38Q92620 1227 aaKnown RBP25.88■■□□□ 1.73
TRAPPC4-208ENST00000527680 RBM8AQ9Y5S9 174 aaKnown RBP25.88■■□□□ 1.73
TRAPPC4-208ENST00000527680 VCANP13611 3396 aa25.88■■□□□ 1.73
TRAPPC4-208ENST00000527680 HAS3O00219 553 aa25.87■■□□□ 1.73
TRAPPC4-208ENST00000527680 RFXAPO00287 272 aa25.87■■□□□ 1.73
TRAPPC4-208ENST00000527680 GTPBP6O43824 516 aaPredicted RBP25.87■■□□□ 1.73
TRAPPC4-208ENST00000527680 TLL1O43897 1013 aa25.87■■□□□ 1.73
TRAPPC4-208ENST00000527680 ZNF200P98182 395 aaPredicted RBP25.87■■□□□ 1.73
TRAPPC4-208ENST00000527680 PTK7Q13308 1070 aa25.87■■□□□ 1.73
TRAPPC4-208ENST00000527680 NFXL1Q6ZNB6 911 aa25.87■■□□□ 1.73
TRAPPC4-208ENST00000527680 IL27Q8NEV9 243 aa25.87■■□□□ 1.73
TRAPPC4-208ENST00000527680 TANC1Q9C0D5 1861 aa25.86■■□□□ 1.73
TRAPPC4-208ENST00000527680 UBA1P22314 1058 aaKnown RBP25.86■■□□□ 1.73
TRAPPC4-208ENST00000527680 KIF5BP33176 963 aa25.86■■□□□ 1.73
TRAPPC4-208ENST00000527680 ANTXR2P58335 489 aa25.86■■□□□ 1.73
TRAPPC4-208ENST00000527680 MRPS5P82675 430 aaKnown RBP25.86■■□□□ 1.73
TRAPPC4-208ENST00000527680 SKIV2LQ15477 1246 aaKnown RBP25.86■■□□□ 1.73
TRAPPC4-208ENST00000527680 GNPTABQ3T906 1256 aa25.86■■□□□ 1.73
TRAPPC4-208ENST00000527680 CNKSR3Q6P9H4 555 aa25.86■■□□□ 1.73
TRAPPC4-208ENST00000527680 ARNTL2Q8WYA1 636 aa25.86■■□□□ 1.73
TRAPPC4-208ENST00000527680 GPKOWQ92917 476 aaPredicted RBP eCLIP25.86■■□□□ 1.73
TRAPPC4-208ENST00000527680 RRP36Q96EU6 259 aaKnown RBP25.86■■□□□ 1.73
TRAPPC4-208ENST00000527680 ASB2Q96Q27 587 aa25.86■■□□□ 1.73
TRAPPC4-208ENST00000527680 RTEL1Q9NZ71 1219 aa25.86■■□□□ 1.73
TRAPPC4-208ENST00000527680 CHD9Q3L8U1 2897 aa25.85■■□□□ 1.73
TRAPPC4-208ENST00000527680 NOP56O00567 594 aaKnown RBP25.85■■□□□ 1.73
TRAPPC4-208ENST00000527680 GPNMBQ14956 572 aa25.85■■□□□ 1.73
TRAPPC4-208ENST00000527680 MB21D2Q8IYB1 491 aaPredicted RBP25.85■■□□□ 1.73
TRAPPC4-208ENST00000527680 ZNF654Q8IZM8 581 aa25.85■■□□□ 1.73
TRAPPC4-208ENST00000527680 SMARCC2Q8TAQ2 1214 aa25.85■■□□□ 1.73
TRAPPC4-208ENST00000527680 CUL5Q93034 780 aa25.85■■□□□ 1.73
TRAPPC4-208ENST00000527680 MYL10Q9BUA6 226 aa25.85■■□□□ 1.73
TRAPPC4-208ENST00000527680 NBNO60934 754 aa25.84■■□□□ 1.73
TRAPPC4-208ENST00000527680 WDR5P61964 334 aaKnown RBP25.84■■□□□ 1.73
TRAPPC4-208ENST00000527680 SEC63Q9UGP8 760 aaKnown RBP25.84■■□□□ 1.73
TRAPPC4-208ENST00000527680 CCDC69A6NI79 296 aa25.83■■□□□ 1.73
TRAPPC4-208ENST00000527680 H3BRB1 525 aa25.83■■□□□ 1.73
TRAPPC4-208ENST00000527680 PRC1O43663 620 aa25.83■■□□□ 1.73
TRAPPC4-208ENST00000527680 HOXD8P13378 290 aaPredicted RBP25.83■■□□□ 1.73
TRAPPC4-208ENST00000527680 TAP1Q03518 808 aa25.83■■□□□ 1.73
TRAPPC4-208ENST00000527680 RBL2Q08999 1139 aa25.83■■□□□ 1.73
TRAPPC4-208ENST00000527680 IKBKEQ14164 716 aa25.83■■□□□ 1.73
TRAPPC4-208ENST00000527680 ZNF618Q5T7W0 954 aa25.83■■□□□ 1.73
TRAPPC4-208ENST00000527680 TMTC2Q8N394 836 aa25.83■■□□□ 1.73
TRAPPC4-208ENST00000527680 C16orf70Q9BSU1 422 aa25.83■■□□□ 1.73
TRAPPC4-208ENST00000527680 TUT1Q9H6E5 874 aaKnown RBP25.83■■□□□ 1.73
TRAPPC4-208ENST00000527680 LY9Q9HBG7 655 aa25.83■■□□□ 1.73
TRAPPC4-208ENST00000527680 ABHD14A-ACY1A0A1B0GW23 586 aa25.82■■□□□ 1.72
TRAPPC4-208ENST00000527680 STAM2O75886 525 aa25.82■■□□□ 1.72
TRAPPC4-208ENST00000527680 DDAH1O94760 285 aa25.82■■□□□ 1.72
TRAPPC4-208ENST00000527680 MCM5P33992 734 aa25.82■■□□□ 1.72
TRAPPC4-208ENST00000527680 THPOP40225 353 aa25.82■■□□□ 1.72
TRAPPC4-208ENST00000527680 MRPS9P82933 396 aaKnown RBP25.82■■□□□ 1.72
TRAPPC4-208ENST00000527680 NEDD9Q14511 834 aa25.82■■□□□ 1.72
TRAPPC4-208ENST00000527680 TMCO2Q7Z6W1 182 aaPredicted RBP25.82■■□□□ 1.72
TRAPPC4-208ENST00000527680 MAP3K14Q99558 947 aa25.82■■□□□ 1.72
TRAPPC4-208ENST00000527680 LZTS2Q9BRK4 669 aa25.82■■□□□ 1.72
TRAPPC4-208ENST00000527680 BCAS3Q9H6U6 928 aa25.82■■□□□ 1.72
TRAPPC4-208ENST00000527680 C17orf102A2RUQ5 167 aa25.81■■□□□ 1.72
TRAPPC4-208ENST00000527680 CXCL10P02778 98 aa25.81■■□□□ 1.72
TRAPPC4-208ENST00000527680 GNAQP50148 359 aa25.81■■□□□ 1.72
TRAPPC4-208ENST00000527680 USP17L6PQ6QN14 398 aa25.81■■□□□ 1.72
TRAPPC4-208ENST00000527680 CYFIP1Q7L576 1253 aa25.81■■□□□ 1.72
TRAPPC4-208ENST00000527680 ATP6V0A1Q93050 837 aa25.81■■□□□ 1.72
TRAPPC4-208ENST00000527680 WNT8BQ93098 351 aa25.81■■□□□ 1.72
TRAPPC4-208ENST00000527680 SPZ1Q9BXG8 430 aa25.81■■□□□ 1.72
TRAPPC4-208ENST00000527680 TNFRSF10AO00220 468 aa25.8■■□□□ 1.72
TRAPPC4-208ENST00000527680 SMARCA1P28370 1054 aa25.8■■□□□ 1.72
TRAPPC4-208ENST00000527680 DEFB103AP81534 67 aa25.8■■□□□ 1.72
TRAPPC4-208ENST00000527680 HIC1Q14526 733 aa25.8■■□□□ 1.72
TRAPPC4-208ENST00000527680 USP26Q9BXU7 913 aa25.8■■□□□ 1.72
TRAPPC4-208ENST00000527680 MTCH2Q9Y6C9 303 aa25.8■■□□□ 1.72
TRAPPC4-208ENST00000527680 PRRC2BQ5JSZ5 2229 aaKnown RBP25.79■■□□□ 1.72
TRAPPC4-208ENST00000527680 CHD7Q9P2D1 2997 aa25.79■■□□□ 1.72
TRAPPC4-208ENST00000527680 EPOPA6NHQ4 379 aa25.79■■□□□ 1.72
TRAPPC4-208ENST00000527680 RSPH10B2B2RC85 870 aa25.79■■□□□ 1.72
TRAPPC4-208ENST00000527680 SPATA31C2B4DYI2 1134 aa25.79■■□□□ 1.72
TRAPPC4-208ENST00000527680 FIBPO43427 364 aa25.79■■□□□ 1.72
TRAPPC4-208ENST00000527680 EFCAB14O75071 495 aa25.79■■□□□ 1.72
TRAPPC4-208ENST00000527680 ARHGEF15O94989 841 aa25.79■■□□□ 1.72
TRAPPC4-208ENST00000527680 LGALS2P05162 132 aa25.79■■□□□ 1.72
TRAPPC4-208ENST00000527680 RSPH10BP0C881 870 aa25.79■■□□□ 1.72
TRAPPC4-208ENST00000527680 ICAM3P32942 547 aa25.79■■□□□ 1.72
TRAPPC4-208ENST00000527680 TRIM71Q2Q1W2 868 aaKnown RBP25.79■■□□□ 1.72
TRAPPC4-208ENST00000527680 FAM117BQ6P1L5 589 aa25.79■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms