RNA–Protein interactions for RNA: ENST00000527469.1

CAPN1-209, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 584 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-209ENST00000527469 MCTP2Q6DN12 878 aa15.31■□□□□ 0.04
CAPN1-209ENST00000527469 REXO1Q8N1G1 1221 aaKnown RBP15.31■□□□□ 0.04
CAPN1-209ENST00000527469 SPATA33Q96N06 139 aa15.31■□□□□ 0.04
CAPN1-209ENST00000527469 TOX2Q96NM4 488 aa15.31■□□□□ 0.04
CAPN1-209ENST00000527469 INPP4AQ96PE3 977 aaPredicted RBP15.31■□□□□ 0.04
CAPN1-209ENST00000527469 TPCN1Q9ULQ1 816 aa15.31■□□□□ 0.04
CAPN1-209ENST00000527469 KIAA1217Q5T5P2 1943 aa15.31■□□□□ 0.04
CAPN1-209ENST00000527469 ESYT2A0FGR8 921 aa15.3■□□□□ 0.04
CAPN1-209ENST00000527469 PFKFB2O60825 505 aa15.3■□□□□ 0.04
CAPN1-209ENST00000527469 RGS20O76081 388 aa15.3■□□□□ 0.04
CAPN1-209ENST00000527469 MMP3P08254 477 aa15.3■□□□□ 0.04
CAPN1-209ENST00000527469 RAG1P15918 1043 aa15.3■□□□□ 0.04
CAPN1-209ENST00000527469 MAGEA10P43363 369 aaPredicted RBP15.3■□□□□ 0.04
CAPN1-209ENST00000527469 NLRP5P59047 1200 aa15.3■□□□□ 0.04
CAPN1-209ENST00000527469 PSMC6P62333 389 aa15.3■□□□□ 0.04
CAPN1-209ENST00000527469 PKN1Q16512 942 aa15.3■□□□□ 0.04
CAPN1-209ENST00000527469 CELF3Q5SZQ8 465 aaKnown RBP15.3■□□□□ 0.04
CAPN1-209ENST00000527469 JAKMIP3Q5VZ66 844 aa15.3■□□□□ 0.04
CAPN1-209ENST00000527469 ANKRD33Q7Z3H0 272 aa15.3■□□□□ 0.04
CAPN1-209ENST00000527469 GIMAP8Q8ND71 665 aaPredicted RBP15.3■□□□□ 0.04
CAPN1-209ENST00000527469 PPTC7Q8NI37 304 aa15.3■□□□□ 0.04
CAPN1-209ENST00000527469 EMID1Q96A84 441 aaPredicted RBP15.3■□□□□ 0.04
CAPN1-209ENST00000527469 IL17RAQ96F46 866 aa15.3■□□□□ 0.04
CAPN1-209ENST00000527469 ANO3Q9BYT9 981 aa15.3■□□□□ 0.04
CAPN1-209ENST00000527469 ZMYND12Q9H0C1 365 aa15.3■□□□□ 0.04
CAPN1-209ENST00000527469 TRIOBPQ9H2D6 2365 aa15.3■□□□□ 0.04
CAPN1-209ENST00000527469 PDLIM7Q9NR12 457 aa15.3■□□□□ 0.04
CAPN1-209ENST00000527469 SH3GLB2Q9NR46 395 aa15.3■□□□□ 0.04
CAPN1-209ENST00000527469 VPS54Q9P1Q0 977 aa15.3■□□□□ 0.04
CAPN1-209ENST00000527469 COLQQ9Y215 455 aaPredicted RBP15.3■□□□□ 0.04
CAPN1-209ENST00000527469 DNAH12Q6ZR08 3092 aa15.3■□□□□ 0.04
CAPN1-209ENST00000527469 SPATA31C2B4DYI2 1134 aa15.29■□□□□ 0.04
CAPN1-209ENST00000527469 XBP1P17861 261 aa15.29■□□□□ 0.04
CAPN1-209ENST00000527469 ICAM3P32942 547 aa15.29■□□□□ 0.04
CAPN1-209ENST00000527469 MDM2Q00987 491 aaPredicted RBP15.29■□□□□ 0.04
CAPN1-209ENST00000527469 SCRN1Q12765 414 aa15.29■□□□□ 0.04
CAPN1-209ENST00000527469 MTMR1Q13613 665 aa15.29■□□□□ 0.04
CAPN1-209ENST00000527469 GPRASP2Q96D09 838 aa15.29■□□□□ 0.04
CAPN1-209ENST00000527469 PGBD1Q96JS3 809 aa15.29■□□□□ 0.04
CAPN1-209ENST00000527469 UBE2OQ9C0C9 1292 aaKnown RBP15.29■□□□□ 0.04
CAPN1-209ENST00000527469 TMEM260Q9NX78 707 aa15.29■□□□□ 0.04
CAPN1-209ENST00000527469 NOD1Q9Y239 953 aa15.29■□□□□ 0.04
CAPN1-209ENST00000527469 GTF3C3Q9Y5Q9 886 aa15.29■□□□□ 0.04
CAPN1-209ENST00000527469 SP4Q02446 784 aa15.28■□□□□ 0.04
CAPN1-209ENST00000527469 MYSM1Q5VVJ2 828 aa15.28■□□□□ 0.04
CAPN1-209ENST00000527469 CYFIP1Q7L576 1253 aa15.28■□□□□ 0.04
CAPN1-209ENST00000527469 WASF1Q92558 559 aa15.28■□□□□ 0.04
CAPN1-209ENST00000527469 KATNAL1Q9BW62 490 aa15.28■□□□□ 0.04
CAPN1-209ENST00000527469 PKD2L1Q9P0L9 805 aa15.28■□□□□ 0.04
CAPN1-209ENST00000527469 PPFIA4O75335 1185 aa15.27■□□□□ 0.04
CAPN1-209ENST00000527469 CDK7P50613 346 aa15.27■□□□□ 0.04
CAPN1-209ENST00000527469 SP2Q02086 613 aa15.27■□□□□ 0.04
CAPN1-209ENST00000527469 FAAP100Q0VG06 881 aa15.27■□□□□ 0.04
CAPN1-209ENST00000527469 NBPF20Q3BBV1 942 aa15.27■□□□□ 0.04
CAPN1-209ENST00000527469 METTL7BQ6UX53 244 aa15.27■□□□□ 0.04
CAPN1-209ENST00000527469 SH3RF1Q7Z6J0 888 aa15.27■□□□□ 0.04
CAPN1-209ENST00000527469 NECAB1Q8N987 351 aa15.27■□□□□ 0.04
CAPN1-209ENST00000527469 TRIM43BA6NCK2 446 aa15.26■□□□□ 0.03
CAPN1-209ENST00000527469 KIAA0355O15063 1070 aa15.26■□□□□ 0.03
CAPN1-209ENST00000527469 MAFGO15525 162 aa15.26■□□□□ 0.03
CAPN1-209ENST00000527469 SUPT20HL2P0C7V6 817 aa15.26■□□□□ 0.03
CAPN1-209ENST00000527469 ZNF286BP0CG31 522 aa15.26■□□□□ 0.03
CAPN1-209ENST00000527469 ITGB5P18084 799 aa15.26■□□□□ 0.03
CAPN1-209ENST00000527469 SREBF1P36956 1147 aa15.26■□□□□ 0.03
CAPN1-209ENST00000527469 ARHGAP4P98171 946 aa15.26■□□□□ 0.03
CAPN1-209ENST00000527469 ME3Q16798 604 aa15.26■□□□□ 0.03
CAPN1-209ENST00000527469 HSDL1Q3SXM5 330 aa15.26■□□□□ 0.03
CAPN1-209ENST00000527469 CEP55Q53EZ4 464 aa15.26■□□□□ 0.03
CAPN1-209ENST00000527469 FAM126BQ8IXS8 530 aa15.26■□□□□ 0.03
CAPN1-209ENST00000527469 FAM177A1Q8N128 213 aaPredicted RBP15.26■□□□□ 0.03
CAPN1-209ENST00000527469 C7orf31Q8N865 590 aa15.26■□□□□ 0.03
CAPN1-209ENST00000527469 SLC43A3Q8NBI5 491 aa15.26■□□□□ 0.03
CAPN1-209ENST00000527469 GTF3C6Q969F1 213 aa15.26■□□□□ 0.03
CAPN1-209ENST00000527469 TRIM43Q96BQ3 446 aaPredicted RBP15.26■□□□□ 0.03
CAPN1-209ENST00000527469 SENP7Q9BQF6 1050 aa15.26■□□□□ 0.03
CAPN1-209ENST00000527469 MXRA8Q9BRK3 442 aa15.26■□□□□ 0.03
CAPN1-209ENST00000527469 SDF4Q9BRK5 362 aa15.26■□□□□ 0.03
CAPN1-209ENST00000527469 TRPV6Q9H1D0 765 aa15.26■□□□□ 0.03
CAPN1-209ENST00000527469 JADE2Q9NQC1 790 aa15.26■□□□□ 0.03
CAPN1-209ENST00000527469 LIMCH1Q9UPQ0 1083 aa15.26■□□□□ 0.03
CAPN1-209ENST00000527469 UBIAD1Q9Y5Z9 338 aa15.26■□□□□ 0.03
CAPN1-209ENST00000527469 GRIN2DO15399 1336 aa15.25■□□□□ 0.03
CAPN1-209ENST00000527469 STK36Q9NRP7 1315 aa15.25■□□□□ 0.03
CAPN1-209ENST00000527469 CLK2P49760 499 aaKnown RBP15.25■□□□□ 0.03
CAPN1-209ENST00000527469 PSEN2P49810 448 aa15.25■□□□□ 0.03
CAPN1-209ENST00000527469 HABP4Q5JVS0 413 aaKnown RBP15.25■□□□□ 0.03
CAPN1-209ENST00000527469 GALNT17Q6IS24 598 aa15.25■□□□□ 0.03
CAPN1-209ENST00000527469 NFRKBQ6P4R8 1299 aa15.25■□□□□ 0.03
CAPN1-209ENST00000527469 BADQ92934 168 aa15.25■□□□□ 0.03
CAPN1-209ENST00000527469 GDF15Q99988 308 aa15.25■□□□□ 0.03
CAPN1-209ENST00000527469 ALG1Q9BT22 464 aa15.25■□□□□ 0.03
CAPN1-209ENST00000527469 ORC3Q9UBD5 711 aaPredicted RBP15.25■□□□□ 0.03
CAPN1-209ENST00000527469 TCEAL9Q9UHQ7 104 aa15.25■□□□□ 0.03
CAPN1-209ENST00000527469 PCDHA4Q9UN74 947 aa15.25■□□□□ 0.03
CAPN1-209ENST00000527469 A0A1W2PPC1 479 aa15.24■□□□□ 0.03
CAPN1-209ENST00000527469 ST18O60284 1047 aa15.24■□□□□ 0.03
CAPN1-209ENST00000527469 TIMP1P01033 207 aa15.24■□□□□ 0.03
CAPN1-209ENST00000527469 BMP8BP34820 402 aa15.24■□□□□ 0.03
CAPN1-209ENST00000527469 RBM25P49756 843 aaKnown RBP15.24■□□□□ 0.03
CAPN1-209ENST00000527469 FPGSQ05932 587 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms