RNA–Protein interactions for RNA: ENST00000527323.5

CAPN1-208, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-208ENST00000527323 GOLGA8HP0CJ92 632 aa13.84□□□□□ -0.19
CAPN1-208ENST00000527323 ALDH1B1P30837 517 aa13.84□□□□□ -0.19
CAPN1-208ENST00000527323 EPHB4P54760 987 aa13.84□□□□□ -0.19
CAPN1-208ENST00000527323 RBM26Q5T8P6 1007 aaKnown RBP13.84□□□□□ -0.19
CAPN1-208ENST00000527323 KCTD16Q68DU8 428 aa13.84□□□□□ -0.19
CAPN1-208ENST00000527323 CLEC10AQ8IUN9 316 aa13.84□□□□□ -0.19
CAPN1-208ENST00000527323 SP8Q8IXZ3 490 aa13.84□□□□□ -0.19
CAPN1-208ENST00000527323 NDST4Q9H3R1 872 aa13.84□□□□□ -0.19
CAPN1-208ENST00000527323 CUEDC2Q9H467 287 aa13.84□□□□□ -0.19
CAPN1-208ENST00000527323 STIM2Q9P246 746 aa13.84□□□□□ -0.19
CAPN1-208ENST00000527323 ARPP21Q9UBL0 812 aaPredicted RBP13.84□□□□□ -0.19
CAPN1-208ENST00000527323 ANKRD31Q8N7Z5 1873 aa13.84□□□□□ -0.19
CAPN1-208ENST00000527323 A0A1W2PQJ5 194 aa13.83□□□□□ -0.2
CAPN1-208ENST00000527323 PPIP5K2O43314 1243 aa13.83□□□□□ -0.2
CAPN1-208ENST00000527323 OR52Z1P0C646 297 aa13.83□□□□□ -0.2
CAPN1-208ENST00000527323 ATP2B4P23634 1241 aa13.83□□□□□ -0.2
CAPN1-208ENST00000527323 CDK17Q00537 523 aa13.83□□□□□ -0.2
CAPN1-208ENST00000527323 RASSF7Q02833 373 aa13.83□□□□□ -0.2
CAPN1-208ENST00000527323 VWA3BQ502W6 1294 aa13.83□□□□□ -0.2
CAPN1-208ENST00000527323 TDRD12Q587J7 1177 aaKnown RBP13.83□□□□□ -0.2
CAPN1-208ENST00000527323 GBP6Q6ZN66 633 aa13.83□□□□□ -0.2
CAPN1-208ENST00000527323 IFT81Q8WYA0 676 aa13.83□□□□□ -0.2
CAPN1-208ENST00000527323 ARL8AQ96BM9 186 aa13.83□□□□□ -0.2
CAPN1-208ENST00000527323 CALML4Q96GE6 196 aa13.83□□□□□ -0.2
CAPN1-208ENST00000527323 USP17L3A6NCW0 530 aa13.83□□□□□ -0.2
CAPN1-208ENST00000527323 USP17L4A6NCW7 530 aa13.83□□□□□ -0.2
CAPN1-208ENST00000527323 EPHB6O15197 1021 aa13.83□□□□□ -0.2
CAPN1-208ENST00000527323 ZEB2O60315 1214 aa13.83□□□□□ -0.2
CAPN1-208ENST00000527323 BTDP43251 543 aa13.83□□□□□ -0.2
CAPN1-208ENST00000527323 ATP1A2P50993 1020 aa13.83□□□□□ -0.2
CAPN1-208ENST00000527323 NAPAP54920 295 aa13.83□□□□□ -0.2
CAPN1-208ENST00000527323 DYMQ7RTS9 669 aa13.83□□□□□ -0.2
CAPN1-208ENST00000527323 USP17L1Q7RTZ2 530 aa13.83□□□□□ -0.2
CAPN1-208ENST00000527323 TSEN2Q8NCE0 465 aaKnown RBP13.83□□□□□ -0.2
CAPN1-208ENST00000527323 CPVLQ9H3G5 476 aa13.83□□□□□ -0.2
CAPN1-208ENST00000527323 VAT1LQ9HCJ6 419 aa13.83□□□□□ -0.2
CAPN1-208ENST00000527323 IRS2Q9Y4H2 1338 aa13.82□□□□□ -0.2
CAPN1-208ENST00000527323 LAD1O00515 517 aa13.82□□□□□ -0.2
CAPN1-208ENST00000527323 EIF3HO15372 352 aaKnown RBP eCLIP13.82□□□□□ -0.2
CAPN1-208ENST00000527323 PPP1R2P41236 205 aa13.82□□□□□ -0.2
CAPN1-208ENST00000527323 EIF6P56537 245 aaKnown RBP13.82□□□□□ -0.2
CAPN1-208ENST00000527323 SHROOM1Q2M3G4 852 aaPredicted RBP13.82□□□□□ -0.2
CAPN1-208ENST00000527323 FIGNQ5HY92 759 aa13.82□□□□□ -0.2
CAPN1-208ENST00000527323 C7orf25Q9BPX7 421 aa13.82□□□□□ -0.2
CAPN1-208ENST00000527323 SEMA6BQ9H3T3 888 aa13.82□□□□□ -0.2
CAPN1-208ENST00000527323 LRRC53A6NM62 1247 aa13.82□□□□□ -0.2
CAPN1-208ENST00000527323 NDUFAB1O14561 156 aa13.82□□□□□ -0.2
CAPN1-208ENST00000527323 RAD21O60216 631 aa13.82□□□□□ -0.2
CAPN1-208ENST00000527323 TSPY3P0CV98 308 aa13.82□□□□□ -0.2
CAPN1-208ENST00000527323 TSPY8P0CW00 308 aa13.82□□□□□ -0.2
CAPN1-208ENST00000527323 SEMA3FQ13275 785 aa13.82□□□□□ -0.2
CAPN1-208ENST00000527323 EMBQ6PCB8 327 aa13.82□□□□□ -0.2
CAPN1-208ENST00000527323 ILDR2Q71H61 639 aa13.82□□□□□ -0.2
CAPN1-208ENST00000527323 SV2BQ7L1I2 683 aa13.82□□□□□ -0.2
CAPN1-208ENST00000527323 DGKHQ86XP1 1220 aa13.82□□□□□ -0.2
CAPN1-208ENST00000527323 ZNF444Q8N0Y2 327 aaPredicted RBP13.82□□□□□ -0.2
CAPN1-208ENST00000527323 MS4A14Q96JA4 679 aa13.82□□□□□ -0.2
CAPN1-208ENST00000527323 AK8Q96MA6 479 aa13.82□□□□□ -0.2
CAPN1-208ENST00000527323 MAGEF1Q9HAY2 307 aa13.82□□□□□ -0.2
CAPN1-208ENST00000527323 DUOX1Q9NRD9 1551 aa13.82□□□□□ -0.2
CAPN1-208ENST00000527323 PRLRP16471 622 aa13.82□□□□□ -0.2
CAPN1-208ENST00000527323 TXKP42681 527 aa13.82□□□□□ -0.2
CAPN1-208ENST00000527323 PDCLQ13371 301 aa13.82□□□□□ -0.2
CAPN1-208ENST00000527323 ALS2CLQ60I27 953 aa13.82□□□□□ -0.2
CAPN1-208ENST00000527323 CCDC84Q86UT8 332 aaPredicted RBP13.82□□□□□ -0.2
CAPN1-208ENST00000527323 ZSCAN29Q8IWY8 852 aaPredicted RBP13.82□□□□□ -0.2
CAPN1-208ENST00000527323 CDK5RAP3Q96JB5 506 aa13.82□□□□□ -0.2
CAPN1-208ENST00000527323 NOX5Q96PH1 765 aa13.82□□□□□ -0.2
CAPN1-208ENST00000527323 IL17RBQ9NRM6 502 aa13.82□□□□□ -0.2
CAPN1-208ENST00000527323 COL24A1Q17RW2 1714 aa13.81□□□□□ -0.2
CAPN1-208ENST00000527323 KCNA3P22001 575 aa13.81□□□□□ -0.2
CAPN1-208ENST00000527323 INPP5BP32019 993 aa13.81□□□□□ -0.2
CAPN1-208ENST00000527323 PRPHP41219 470 aa13.81□□□□□ -0.2
CAPN1-208ENST00000527323 RNASE9P60153 205 aaKnown RBP13.81□□□□□ -0.2
CAPN1-208ENST00000527323 GFPT1Q06210 699 aaPredicted RBP13.81□□□□□ -0.2
CAPN1-208ENST00000527323 NONOQ15233 471 aaKnown RBP eCLIP13.81□□□□□ -0.2
CAPN1-208ENST00000527323 CFAP58Q5T655 872 aa13.81□□□□□ -0.2
CAPN1-208ENST00000527323 HAUS3Q68CZ6 603 aa13.81□□□□□ -0.2
CAPN1-208ENST00000527323 ZFPM1Q8IX07 1006 aa13.81□□□□□ -0.2
CAPN1-208ENST00000527323 SH2D3CQ8N5H7 860 aa13.81□□□□□ -0.2
CAPN1-208ENST00000527323 POLD4Q9HCU8 107 aa13.81□□□□□ -0.2
CAPN1-208ENST00000527323 NLRC4Q9NPP4 1024 aa13.81□□□□□ -0.2
CAPN1-208ENST00000527323 RBM12Q9NTZ6 932 aaKnown RBP13.81□□□□□ -0.2
CAPN1-208ENST00000527323 BARHL2Q9NY43 387 aa13.81□□□□□ -0.2
CAPN1-208ENST00000527323 ZNF831Q5JPB2 1677 aa13.81□□□□□ -0.2
CAPN1-208ENST00000527323 STXBP3O00186 592 aa13.81□□□□□ -0.2
CAPN1-208ENST00000527323 ECE2O60344 883 aa13.81□□□□□ -0.2
CAPN1-208ENST00000527323 FGFR1OPO95684 399 aaKnown RBP13.81□□□□□ -0.2
CAPN1-208ENST00000527323 GRM4Q14833 912 aa13.81□□□□□ -0.2
CAPN1-208ENST00000527323 ENOX2Q16206 610 aaKnown RBP13.81□□□□□ -0.2
CAPN1-208ENST00000527323 SOGA3Q5TF21 947 aa13.81□□□□□ -0.2
CAPN1-208ENST00000527323 GALNT17Q6IS24 598 aa13.81□□□□□ -0.2
CAPN1-208ENST00000527323 KIAA0895Q8NCT3 520 aa13.81□□□□□ -0.2
CAPN1-208ENST00000527323 IQCDQ96DY2 449 aa13.81□□□□□ -0.2
CAPN1-208ENST00000527323 MAD2L2Q9UI95 211 aa13.81□□□□□ -0.2
CAPN1-208ENST00000527323 LRP5O75197 1615 aa13.8□□□□□ -0.2
CAPN1-208ENST00000527323 KLRG2A4D1S0 409 aaPredicted RBP13.8□□□□□ -0.2
CAPN1-208ENST00000527323 SMCO2A6NFE2 343 aa13.8□□□□□ -0.2
CAPN1-208ENST00000527323 M0R2N6 131 aa13.8□□□□□ -0.2
CAPN1-208ENST00000527323 CYTH3O43739 400 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms