RNA–Protein interactions for RNA: ENST00000527025.5

CCDC90B-208, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 5

Gene CCDC90B, Length 777 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-208ENST00000527025 C1orf53Q5VUE5 145 aa10.22□□□□□ -0.77
CCDC90B-208ENST00000527025 GPR153Q6NV75 609 aa10.22□□□□□ -0.77
CCDC90B-208ENST00000527025 HEATR3Q7Z4Q2 680 aa10.22□□□□□ -0.77
CCDC90B-208ENST00000527025 SCFD2Q8WU76 684 aa10.22□□□□□ -0.77
CCDC90B-208ENST00000527025 TRIM43Q96BQ3 446 aaPredicted RBP10.22□□□□□ -0.77
CCDC90B-208ENST00000527025 KIF2CQ99661 725 aa10.22□□□□□ -0.77
CCDC90B-208ENST00000527025 PSTPIP2Q9H939 334 aa10.22□□□□□ -0.77
CCDC90B-208ENST00000527025 RBM28Q9NW13 759 aaKnown RBP10.22□□□□□ -0.77
CCDC90B-208ENST00000527025 TMEM260Q9NX78 707 aa10.22□□□□□ -0.77
CCDC90B-208ENST00000527025 RBM27Q9P2N5 1060 aaKnown RBP10.22□□□□□ -0.77
CCDC90B-208ENST00000527025 NAP1L2Q9ULW6 460 aaPredicted RBP10.22□□□□□ -0.77
CCDC90B-208ENST00000527025 ATP11BQ9Y2G3 1177 aa10.22□□□□□ -0.77
CCDC90B-208ENST00000527025 Q9Y3F1 56 aa10.22□□□□□ -0.77
CCDC90B-208ENST00000527025 CYP46A1Q9Y6A2 500 aa10.22□□□□□ -0.77
CCDC90B-208ENST00000527025 MOXD2PA6NHM9 499 aa10.21□□□□□ -0.77
CCDC90B-208ENST00000527025 A6NJR5 290 aa10.21□□□□□ -0.77
CCDC90B-208ENST00000527025 SORBS3O60504 671 aa10.21□□□□□ -0.77
CCDC90B-208ENST00000527025 FAAP100Q0VG06 881 aa10.21□□□□□ -0.77
CCDC90B-208ENST00000527025 SAMD3Q8N6K7 520 aa10.21□□□□□ -0.77
CCDC90B-208ENST00000527025 GDF15Q99988 308 aa10.21□□□□□ -0.77
CCDC90B-208ENST00000527025 PDRG1Q9NUG6 133 aa10.21□□□□□ -0.77
CCDC90B-208ENST00000527025 RTEL1Q9NZ71 1219 aa10.21□□□□□ -0.77
CCDC90B-208ENST00000527025 SEC63Q9UGP8 760 aaKnown RBP10.21□□□□□ -0.77
CCDC90B-208ENST00000527025 TPCN1Q9ULQ1 816 aa10.21□□□□□ -0.77
CCDC90B-208ENST00000527025 NR2E3Q9Y5X4 410 aa10.21□□□□□ -0.77
CCDC90B-208ENST00000527025 TRIOBPQ9H2D6 2365 aa10.21□□□□□ -0.78
CCDC90B-208ENST00000527025 PRPF3O43395 683 aaKnown RBP10.2□□□□□ -0.78
CCDC90B-208ENST00000527025 EDIL3O43854 480 aa10.2□□□□□ -0.78
CCDC90B-208ENST00000527025 ELP1O95163 1332 aa10.2□□□□□ -0.78
CCDC90B-208ENST00000527025 LARGE1O95461 756 aa10.2□□□□□ -0.78
CCDC90B-208ENST00000527025 ITGB5P18084 799 aa10.2□□□□□ -0.78
CCDC90B-208ENST00000527025 MAGEA10P43363 369 aaPredicted RBP10.2□□□□□ -0.78
CCDC90B-208ENST00000527025 AK2P54819 239 aa10.2□□□□□ -0.78
CCDC90B-208ENST00000527025 PURAQ00577 322 aaKnown RBP10.2□□□□□ -0.78
CCDC90B-208ENST00000527025 STK3Q13188 491 aa10.2□□□□□ -0.78
CCDC90B-208ENST00000527025 TTLL4Q14679 1199 aa10.2□□□□□ -0.78
CCDC90B-208ENST00000527025 PPP2R5BQ15173 497 aa10.2□□□□□ -0.78
CCDC90B-208ENST00000527025 PFKFB3Q16875 520 aaPredicted RBP10.2□□□□□ -0.78
CCDC90B-208ENST00000527025 ANKRD33Q7Z3H0 272 aa10.2□□□□□ -0.78
CCDC90B-208ENST00000527025 SLC43A3Q8NBI5 491 aa10.2□□□□□ -0.78
CCDC90B-208ENST00000527025 PCSK9Q8NBP7 692 aaKnown RBP10.2□□□□□ -0.78
CCDC90B-208ENST00000527025 OR6J1Q8NGC5 347 aa10.2□□□□□ -0.78
CCDC90B-208ENST00000527025 CYP2W1Q8TAV3 490 aa10.2□□□□□ -0.78
CCDC90B-208ENST00000527025 AFG1LQ8WV93 481 aa10.2□□□□□ -0.78
CCDC90B-208ENST00000527025 ZNF274Q96GC6 653 aaPredicted RBP10.2□□□□□ -0.78
CCDC90B-208ENST00000527025 PGBD1Q96JS3 809 aa10.2□□□□□ -0.78
CCDC90B-208ENST00000527025 TBC1D32Q96NH3 1257 aa10.2□□□□□ -0.78
CCDC90B-208ENST00000527025 C22orf23Q9BZE7 217 aa10.2□□□□□ -0.78
CCDC90B-208ENST00000527025 AP5M1Q9H0R1 490 aa10.2□□□□□ -0.78
CCDC90B-208ENST00000527025 ALDH8A1Q9H2A2 487 aaPredicted RBP10.2□□□□□ -0.78
CCDC90B-208ENST00000527025 STARD7Q9NQZ5 370 aa10.2□□□□□ -0.78
CCDC90B-208ENST00000527025 PDLIM7Q9NR12 457 aa10.2□□□□□ -0.78
CCDC90B-208ENST00000527025 BARHL2Q9NY43 387 aa10.2□□□□□ -0.78
CCDC90B-208ENST00000527025 SCN10AQ9Y5Y9 1956 aa10.19□□□□□ -0.78
CCDC90B-208ENST00000527025 SMCO2A6NFE2 343 aa10.19□□□□□ -0.78
CCDC90B-208ENST00000527025 SPATA31C2B4DYI2 1134 aa10.19□□□□□ -0.78
CCDC90B-208ENST00000527025 ARVCFO00192 962 aa10.19□□□□□ -0.78
CCDC90B-208ENST00000527025 PQBP1O60828 265 aaKnown RBP10.19□□□□□ -0.78
CCDC90B-208ENST00000527025 ATP9AO75110 1047 aa10.19□□□□□ -0.78
CCDC90B-208ENST00000527025 CTDNEP1O95476 244 aa10.19□□□□□ -0.78
CCDC90B-208ENST00000527025 SCG2P13521 617 aa10.19□□□□□ -0.78
CCDC90B-208ENST00000527025 IFNAR1P17181 557 aa10.19□□□□□ -0.78
CCDC90B-208ENST00000527025 CLK2P49760 499 aaKnown RBP10.19□□□□□ -0.78
CCDC90B-208ENST00000527025 MDM2Q00987 491 aaPredicted RBP10.19□□□□□ -0.78
CCDC90B-208ENST00000527025 ST3GAL1Q11201 340 aa10.19□□□□□ -0.78
CCDC90B-208ENST00000527025 SCRN1Q12765 414 aa10.19□□□□□ -0.78
CCDC90B-208ENST00000527025 TRAF1Q13077 416 aa10.19□□□□□ -0.78
CCDC90B-208ENST00000527025 HABP4Q5JVS0 413 aaKnown RBP10.19□□□□□ -0.78
CCDC90B-208ENST00000527025 MYSM1Q5VVJ2 828 aa10.19□□□□□ -0.78
CCDC90B-208ENST00000527025 FAM126BQ8IXS8 530 aa10.19□□□□□ -0.78
CCDC90B-208ENST00000527025 SMARCC2Q8TAQ2 1214 aa10.19□□□□□ -0.78
CCDC90B-208ENST00000527025 KAT2BQ92831 832 aa10.19□□□□□ -0.78
CCDC90B-208ENST00000527025 GLT1D1Q96MS3 346 aa10.19□□□□□ -0.78
CCDC90B-208ENST00000527025 AIFM3Q96NN9 605 aa10.19□□□□□ -0.78
CCDC90B-208ENST00000527025 INPP4AQ96PE3 977 aaPredicted RBP10.19□□□□□ -0.78
CCDC90B-208ENST00000527025 SPC25Q9HBM1 224 aa10.19□□□□□ -0.78
CCDC90B-208ENST00000527025 RIC8AQ9NPQ8 531 aa10.19□□□□□ -0.78
CCDC90B-208ENST00000527025 PCDHA6Q9UN73 950 aa10.19□□□□□ -0.78
CCDC90B-208ENST00000527025 PCDHA8Q9Y5H6 950 aa10.19□□□□□ -0.78
CCDC90B-208ENST00000527025 B4DLN1 442 aa10.18□□□□□ -0.78
CCDC90B-208ENST00000527025 CD4P01730 458 aa10.18□□□□□ -0.78
CCDC90B-208ENST00000527025 MMP3P08254 477 aa10.18□□□□□ -0.78
CCDC90B-208ENST00000527025 MYL3P08590 195 aa10.18□□□□□ -0.78
CCDC90B-208ENST00000527025 UBA1P22314 1058 aaKnown RBP10.18□□□□□ -0.78
CCDC90B-208ENST00000527025 CCND2P30279 289 aa10.18□□□□□ -0.78
CCDC90B-208ENST00000527025 MRPL12P52815 198 aaKnown RBP10.18□□□□□ -0.78
CCDC90B-208ENST00000527025 EPHB4P54760 987 aa10.18□□□□□ -0.78
CCDC90B-208ENST00000527025 NAPAP54920 295 aa10.18□□□□□ -0.78
CCDC90B-208ENST00000527025 ITGA7Q13683 1181 aa10.18□□□□□ -0.78
CCDC90B-208ENST00000527025 HIC1Q14526 733 aa10.18□□□□□ -0.78
CCDC90B-208ENST00000527025 ME3Q16798 604 aa10.18□□□□□ -0.78
CCDC90B-208ENST00000527025 HSDL1Q3SXM5 330 aa10.18□□□□□ -0.78
CCDC90B-208ENST00000527025 CELF3Q5SZQ8 465 aaKnown RBP10.18□□□□□ -0.78
CCDC90B-208ENST00000527025 PCNX4Q63HM2 1172 aa10.18□□□□□ -0.78
CCDC90B-208ENST00000527025 NECAB1Q8N987 351 aa10.18□□□□□ -0.78
CCDC90B-208ENST00000527025 CRYGNQ8WXF5 182 aa10.18□□□□□ -0.78
CCDC90B-208ENST00000527025 VTI1AQ96AJ9 217 aa10.18□□□□□ -0.78
CCDC90B-208ENST00000527025 TOX2Q96NM4 488 aa10.18□□□□□ -0.78
CCDC90B-208ENST00000527025 CTAGE1Q96RT6 745 aa10.18□□□□□ -0.78
CCDC90B-208ENST00000527025 MPHOSPH6Q99547 160 aaKnown RBP10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms