RNA–Protein interactions for RNA: ENST00000526564.1

PPP1R16A-204, Transcript of protein phosphatase 1 regulatory subunit 16A, human

TSL 5

Gene PPP1R16A, Length 675 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPP1R16A-204	ENST00000526564	PCDHA8	Q9Y5H6	950 aa		27.99	■■■□□ 2.07
PPP1R16A-204	ENST00000526564	LAMA3	Q16787	3333 aa		27.99	■■■□□ 2.07
PPP1R16A-204	ENST00000526564	SMCO2	A6NFE2	343 aa		27.98	■■■□□ 2.07
PPP1R16A-204	ENST00000526564	PRPF3	O43395	683 aa	Known RBP	27.98	■■■□□ 2.07
PPP1R16A-204	ENST00000526564	GGPS1	O95749	300 aa		27.98	■■■□□ 2.07
PPP1R16A-204	ENST00000526564	RAG1	P15918	1043 aa		27.98	■■■□□ 2.07
PPP1R16A-204	ENST00000526564	ICAM3	P32942	547 aa		27.98	■■■□□ 2.07
PPP1R16A-204	ENST00000526564	ADCY7	P51828	1080 aa		27.98	■■■□□ 2.07
PPP1R16A-204	ENST00000526564	PKN1	Q16512	942 aa		27.98	■■■□□ 2.07
PPP1R16A-204	ENST00000526564	CELF3	Q5SZQ8	465 aa	Known RBP	27.98	■■■□□ 2.07
PPP1R16A-204	ENST00000526564	MYSM1	Q5VVJ2	828 aa		27.98	■■■□□ 2.07
PPP1R16A-204	ENST00000526564	XRRA1	Q6P2D8	792 aa		27.98	■■■□□ 2.07
PPP1R16A-204	ENST00000526564	RNF26	Q9BY78	433 aa	Predicted RBP	27.98	■■■□□ 2.07
PPP1R16A-204	ENST00000526564	SEMA3F	Q13275	785 aa		27.97	■■■□□ 2.07
PPP1R16A-204	ENST00000526564	TDH	Q8IZJ6	230 aa		27.97	■■■□□ 2.07
PPP1R16A-204	ENST00000526564	PPTC7	Q8NI37	304 aa		27.97	■■■□□ 2.07
PPP1R16A-204	ENST00000526564	PPP1R13L	Q8WUF5	828 aa		27.97	■■■□□ 2.07
PPP1R16A-204	ENST00000526564	SLC26A6	Q9BXS9	759 aa		27.97	■■■□□ 2.07
PPP1R16A-204	ENST00000526564	SPATA31C2	B4DYI2	1134 aa		27.96	■■■□□ 2.07
PPP1R16A-204	ENST00000526564	FIBP	O43427	364 aa		27.96	■■■□□ 2.07
PPP1R16A-204	ENST00000526564	B4GALT4	O60513	344 aa		27.96	■■■□□ 2.07
PPP1R16A-204	ENST00000526564	AKAP17A	Q02040	695 aa	Known RBP	27.96	■■■□□ 2.07
PPP1R16A-204	ENST00000526564	DGKD	Q16760	1214 aa		27.96	■■■□□ 2.07
PPP1R16A-204	ENST00000526564	NBPF20	Q3BBV1	942 aa		27.96	■■■□□ 2.07
PPP1R16A-204	ENST00000526564	PGBD1	Q96JS3	809 aa		27.96	■■■□□ 2.07
PPP1R16A-204	ENST00000526564	GLT8D2	Q9H1C3	349 aa		27.96	■■■□□ 2.07
PPP1R16A-204	ENST00000526564	TRPV6	Q9H1D0	765 aa		27.96	■■■□□ 2.07
PPP1R16A-204	ENST00000526564	RBM25	P49756	843 aa	Known RBP	27.95	■■■□□ 2.06
PPP1R16A-204	ENST00000526564	AK2	P54819	239 aa		27.95	■■■□□ 2.06
PPP1R16A-204	ENST00000526564	STK3	Q13188	491 aa		27.95	■■■□□ 2.06
PPP1R16A-204	ENST00000526564	CPLX2	Q6PUV4	134 aa	Known RBP	27.95	■■■□□ 2.06
PPP1R16A-204	ENST00000526564	SPATA33	Q96N06	139 aa		27.95	■■■□□ 2.06
PPP1R16A-204	ENST00000526564	BCAS3	Q9H6U6	928 aa		27.95	■■■□□ 2.06
PPP1R16A-204	ENST00000526564	SCN10A	Q9Y5Y9	1956 aa		27.95	■■■□□ 2.06
PPP1R16A-204	ENST00000526564	TIMP1	P01033	207 aa		27.94	■■■□□ 2.06
PPP1R16A-204	ENST00000526564	NEK4	P51957	841 aa		27.94	■■■□□ 2.06
PPP1R16A-204	ENST00000526564	CHMP4BP1	P59074	171 aa		27.94	■■■□□ 2.06
PPP1R16A-204	ENST00000526564	HSDL1	Q3SXM5	330 aa		27.94	■■■□□ 2.06
PPP1R16A-204	ENST00000526564	FAM47C	Q5HY64	1035 aa		27.94	■■■□□ 2.06
PPP1R16A-204	ENST00000526564	NLRX1	Q86UT6	975 aa		27.94	■■■□□ 2.06
PPP1R16A-204	ENST00000526564	KAT2B	Q92831	832 aa		27.94	■■■□□ 2.06
PPP1R16A-204	ENST00000526564	C22orf23	Q9BZE7	217 aa		27.94	■■■□□ 2.06
PPP1R16A-204	ENST00000526564	EHMT1	Q9H9B1	1298 aa		27.94	■■■□□ 2.06
PPP1R16A-204	ENST00000526564	MLXIP	Q9HAP2	919 aa		27.94	■■■□□ 2.06
PPP1R16A-204	ENST00000526564	UPF2	Q9HAU5	1272 aa	Known RBP	27.94	■■■□□ 2.06
PPP1R16A-204	ENST00000526564	TMEM260	Q9NX78	707 aa		27.94	■■■□□ 2.06
PPP1R16A-204	ENST00000526564	CPLX1	O14810	134 aa		27.93	■■■□□ 2.06
PPP1R16A-204	ENST00000526564	NFRKB	Q6P4R8	1299 aa		27.93	■■■□□ 2.06
PPP1R16A-204	ENST00000526564	CCDC12	Q8WUD4	166 aa	Predicted RBP	27.93	■■■□□ 2.06
PPP1R16A-204	ENST00000526564	TRMT13	Q9NUP7	481 aa	Known RBP	27.93	■■■□□ 2.06
PPP1R16A-204	ENST00000526564	TPCN1	Q9ULQ1	816 aa		27.93	■■■□□ 2.06
PPP1R16A-204	ENST00000526564	FOS	P01100	380 aa	Predicted RBP	27.92	■■■□□ 2.06
PPP1R16A-204	ENST00000526564	ZNF286B	P0CG31	522 aa		27.92	■■■□□ 2.06
PPP1R16A-204	ENST00000526564	HOXD8	P13378	290 aa	Predicted RBP	27.92	■■■□□ 2.06
PPP1R16A-204	ENST00000526564	ITGB5	P18084	799 aa		27.92	■■■□□ 2.06
PPP1R16A-204	ENST00000526564	CLK2	P49760	499 aa	Known RBP	27.92	■■■□□ 2.06
PPP1R16A-204	ENST00000526564	NEDD9	Q14511	834 aa		27.92	■■■□□ 2.06
PPP1R16A-204	ENST00000526564	TRIM22	Q8IYM9	498 aa		27.92	■■■□□ 2.06
PPP1R16A-204	ENST00000526564	ANO3	Q9BYT9	981 aa		27.92	■■■□□ 2.06
PPP1R16A-204	ENST00000526564	PPP1R12C	Q9BZL4	782 aa		27.92	■■■□□ 2.06
PPP1R16A-204	ENST00000526564	SLK	Q9H2G2	1235 aa	Predicted RBP	27.92	■■■□□ 2.06
PPP1R16A-204	ENST00000526564	UBIAD1	Q9Y5Z9	338 aa		27.92	■■■□□ 2.06
PPP1R16A-204	ENST00000526564	ESYT2	A0FGR8	921 aa		27.91	■■■□□ 2.06
PPP1R16A-204	ENST00000526564	PFKFB2	O60825	505 aa		27.91	■■■□□ 2.06
PPP1R16A-204	ENST00000526564	AP3B2	Q13367	1082 aa		27.91	■■■□□ 2.06
PPP1R16A-204	ENST00000526564	METTL7B	Q6UX53	244 aa		27.91	■■■□□ 2.06
PPP1R16A-204	ENST00000526564	CYFIP1	Q7L576	1253 aa		27.91	■■■□□ 2.06
PPP1R16A-204	ENST00000526564	GPRASP2	Q96D09	838 aa		27.91	■■■□□ 2.06
PPP1R16A-204	ENST00000526564	ZMYND12	Q9H0C1	365 aa		27.91	■■■□□ 2.06
PPP1R16A-204	ENST00000526564	ADAMTS3	O15072	1205 aa		27.9	■■■□□ 2.06
PPP1R16A-204	ENST00000526564	PPFIA4	O75335	1185 aa		27.9	■■■□□ 2.06
PPP1R16A-204	ENST00000526564	CDKL5	O76039	1030 aa		27.9	■■■□□ 2.06
PPP1R16A-204	ENST00000526564	FPGS	Q05932	587 aa		27.9	■■■□□ 2.06
PPP1R16A-204	ENST00000526564	JAKMIP3	Q5VZ66	844 aa		27.9	■■■□□ 2.06
PPP1R16A-204	ENST00000526564	IL27	Q8NEV9	243 aa		27.9	■■■□□ 2.06
PPP1R16A-204	ENST00000526564	SENP7	Q9BQF6	1050 aa		27.9	■■■□□ 2.06
PPP1R16A-204	ENST00000526564	HIPK3	Q9H422	1215 aa		27.9	■■■□□ 2.06
PPP1R16A-204	ENST00000526564	C6orf50	Q9HD87	102 aa		27.9	■■■□□ 2.06
PPP1R16A-204	ENST00000526564	SOX1	O00570	391 aa	Predicted RBP	27.89	■■■□□ 2.06
PPP1R16A-204	ENST00000526564	F2	P00734	622 aa		27.89	■■■□□ 2.06
PPP1R16A-204	ENST00000526564	CYP2C18	P33260	490 aa		27.89	■■■□□ 2.06
PPP1R16A-204	ENST00000526564	EPHB4	P54760	987 aa		27.89	■■■□□ 2.06
PPP1R16A-204	ENST00000526564	PTPN11	Q06124	597 aa	Predicted RBP	27.89	■■■□□ 2.06
PPP1R16A-204	ENST00000526564	SSRP1	Q08945	709 aa	Known RBP	27.89	■■■□□ 2.06
PPP1R16A-204	ENST00000526564	SCRN1	Q12765	414 aa		27.89	■■■□□ 2.06
PPP1R16A-204	ENST00000526564	C9orf50	Q5SZB4	431 aa		27.89	■■■□□ 2.06
PPP1R16A-204	ENST00000526564	MFSD5	Q6N075	450 aa		27.89	■■■□□ 2.06
PPP1R16A-204	ENST00000526564	CDHR1	Q96JP9	859 aa		27.89	■■■□□ 2.06
PPP1R16A-204	ENST00000526564	KIF2C	Q99661	725 aa		27.89	■■■□□ 2.06
PPP1R16A-204	ENST00000526564	VPS54	Q9P1Q0	977 aa		27.89	■■■□□ 2.06
PPP1R16A-204	ENST00000526564	MYH7B	A7E2Y1	1941 aa		27.88	■■■□□ 2.05
PPP1R16A-204	ENST00000526564	NOP56	O00567	594 aa	Known RBP	27.88	■■■□□ 2.05
PPP1R16A-204	ENST00000526564	ATP9A	O75110	1047 aa		27.88	■■■□□ 2.05
PPP1R16A-204	ENST00000526564	SUPT20HL2	P0C7V6	817 aa		27.88	■■■□□ 2.05
PPP1R16A-204	ENST00000526564	CYP2C9	P11712	490 aa		27.88	■■■□□ 2.05
PPP1R16A-204	ENST00000526564	PSEN2	P49810	448 aa		27.88	■■■□□ 2.05
PPP1R16A-204	ENST00000526564	MTMR1	Q13613	665 aa		27.88	■■■□□ 2.05
PPP1R16A-204	ENST00000526564	SHH	Q15465	462 aa		27.88	■■■□□ 2.05
PPP1R16A-204	ENST00000526564	FAM177A1	Q8N128	213 aa	Predicted RBP	27.88	■■■□□ 2.05
PPP1R16A-204	ENST00000526564	NOC4L	Q9BVI4	516 aa	Known RBP	27.88	■■■□□ 2.05

Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms