RNA–Protein interactions for RNA: ENST00000525878.5

CSDE1-210, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 626 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-210ENST00000525878 B2RBV5 119 aa6.94□□□□□ -1.3
CSDE1-210ENST00000525878 HGSO14964 777 aaPredicted RBP6.94□□□□□ -1.3
CSDE1-210ENST00000525878 ZNF20P17024 532 aa6.94□□□□□ -1.3
CSDE1-210ENST00000525878 LTBRP36941 435 aa6.94□□□□□ -1.3
CSDE1-210ENST00000525878 ECI1P42126 302 aa6.94□□□□□ -1.3
CSDE1-210ENST00000525878 SV2CQ496J9 727 aa6.94□□□□□ -1.3
CSDE1-210ENST00000525878 TNNI3KQ59H18 835 aa6.94□□□□□ -1.3
CSDE1-210ENST00000525878 MRM1Q6IN84 353 aaKnown RBP6.94□□□□□ -1.3
CSDE1-210ENST00000525878 ARRDC4Q8NCT1 418 aa6.94□□□□□ -1.3
CSDE1-210ENST00000525878 MBD6Q96DN6 1003 aa6.94□□□□□ -1.3
CSDE1-210ENST00000525878 LCORQ96JN0 433 aaPredicted RBP6.94□□□□□ -1.3
CSDE1-210ENST00000525878 CDIP1Q9H305 208 aa6.94□□□□□ -1.3
CSDE1-210ENST00000525878 DTLQ9NZJ0 730 aa6.94□□□□□ -1.3
CSDE1-210ENST00000525878 NPFFR2Q9Y5X5 522 aa6.94□□□□□ -1.3
CSDE1-210ENST00000525878 MATN3O15232 486 aa6.93□□□□□ -1.3
CSDE1-210ENST00000525878 B4GALT3O60512 393 aa6.93□□□□□ -1.3
CSDE1-210ENST00000525878 LCP1P13796 627 aa6.93□□□□□ -1.3
CSDE1-210ENST00000525878 LSAMPQ13449 338 aa6.93□□□□□ -1.3
CSDE1-210ENST00000525878 CHRNA2Q15822 529 aa6.93□□□□□ -1.3
CSDE1-210ENST00000525878 SLC35F1Q5T1Q4 408 aa6.93□□□□□ -1.3
CSDE1-210ENST00000525878 PPIL6Q8IXY8 311 aa6.93□□□□□ -1.3
CSDE1-210ENST00000525878 TMEM145Q8NBT3 493 aa6.93□□□□□ -1.3
CSDE1-210ENST00000525878 MICAL1Q8TDZ2 1067 aa6.93□□□□□ -1.3
CSDE1-210ENST00000525878 TOE1Q96GM8 510 aaKnown RBP6.93□□□□□ -1.3
CSDE1-210ENST00000525878 LOXL4Q96JB6 756 aa6.93□□□□□ -1.3
CSDE1-210ENST00000525878 C8orf49Q96NF6 230 aa6.93□□□□□ -1.3
CSDE1-210ENST00000525878 HSPBP1Q9NZL4 362 aa6.93□□□□□ -1.3
CSDE1-210ENST00000525878 PRKAG3Q9UGI9 489 aa6.93□□□□□ -1.3
CSDE1-210ENST00000525878 COA3Q9Y2R0 106 aaPredicted RBP6.93□□□□□ -1.3
CSDE1-210ENST00000525878 MRVI1Q9Y6F6 885 aa6.93□□□□□ -1.3
CSDE1-210ENST00000525878 LRG1P02750 347 aa6.92□□□□□ -1.3
CSDE1-210ENST00000525878 STEAP3Q658P3 488 aa6.92□□□□□ -1.3
CSDE1-210ENST00000525878 LARP1BQ659C4 914 aaKnown RBP6.92□□□□□ -1.3
CSDE1-210ENST00000525878 TEPPQ6URK8 271 aa6.92□□□□□ -1.3
CSDE1-210ENST00000525878 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.92□□□□□ -1.3
CSDE1-210ENST00000525878 YTHDC1Q96MU7 727 aaKnown RBP6.92□□□□□ -1.3
CSDE1-210ENST00000525878 KRTAP17-1Q9BYP8 105 aa6.92□□□□□ -1.3
CSDE1-210ENST00000525878 LRP2BPQ9P2M1 347 aa6.92□□□□□ -1.3
CSDE1-210ENST00000525878 WASF3Q9UPY6 502 aa6.92□□□□□ -1.3
CSDE1-210ENST00000525878 IL13P35225 146 aa6.91□□□□□ -1.3
CSDE1-210ENST00000525878 SURF1Q15526 300 aa6.91□□□□□ -1.3
CSDE1-210ENST00000525878 PKN3Q6P5Z2 889 aa6.91□□□□□ -1.3
CSDE1-210ENST00000525878 LIMS2Q7Z4I7 341 aa6.91□□□□□ -1.3
CSDE1-210ENST00000525878 YIPF4Q9BSR8 244 aa6.91□□□□□ -1.3
CSDE1-210ENST00000525878 PPP4R1LQ9P1A2 415 aa6.91□□□□□ -1.3
CSDE1-210ENST00000525878 PCDHB4Q9Y5E5 795 aa6.91□□□□□ -1.3
CSDE1-210ENST00000525878 PCDHA2Q9Y5H9 948 aa6.91□□□□□ -1.3
CSDE1-210ENST00000525878 LAMTOR5O43504 91 aa6.9□□□□□ -1.3
CSDE1-210ENST00000525878 ETFBP38117 255 aa6.9□□□□□ -1.3
CSDE1-210ENST00000525878 MLLT6P55198 1093 aaPredicted RBP6.9□□□□□ -1.3
CSDE1-210ENST00000525878 ZXDAP98168 799 aa6.9□□□□□ -1.3
CSDE1-210ENST00000525878 DVL3Q92997 716 aaPredicted RBP6.9□□□□□ -1.3
CSDE1-210ENST00000525878 EPN3Q9H201 632 aa6.9□□□□□ -1.3
CSDE1-210ENST00000525878 CAPN10Q9HC96 672 aa6.9□□□□□ -1.3
CSDE1-210ENST00000525878 DDAH1O94760 285 aa6.89□□□□□ -1.31
CSDE1-210ENST00000525878 SSBP05455 408 aaKnown RBP eCLIP6.89□□□□□ -1.31
CSDE1-210ENST00000525878 KCNJ6P48051 423 aa6.89□□□□□ -1.31
CSDE1-210ENST00000525878 FXNQ16595 210 aa6.89□□□□□ -1.31
CSDE1-210ENST00000525878 PRAMEF18Q5VWM3 479 aa6.89□□□□□ -1.31
CSDE1-210ENST00000525878 GLB1LQ6UWU2 654 aa6.89□□□□□ -1.31
CSDE1-210ENST00000525878 PHOSPHO1Q8TCT1 267 aa6.89□□□□□ -1.31
CSDE1-210ENST00000525878 ZCCHC14Q8WYQ9 949 aaKnown RBP6.89□□□□□ -1.31
CSDE1-210ENST00000525878 CLIC6Q96NY7 704 aa6.89□□□□□ -1.31
CSDE1-210ENST00000525878 TMEM209Q96SK2 561 aa6.89□□□□□ -1.31
CSDE1-210ENST00000525878 SMOC1Q9H4F8 434 aa6.89□□□□□ -1.31
CSDE1-210ENST00000525878 EPB41L1Q9H4G0 881 aa6.89□□□□□ -1.31
CSDE1-210ENST00000525878 CLDND1Q9NY35 253 aa6.89□□□□□ -1.31
CSDE1-210ENST00000525878 ZNF536O15090 1300 aa6.88□□□□□ -1.31
CSDE1-210ENST00000525878 AKAP8O43823 692 aaKnown RBP6.88□□□□□ -1.31
CSDE1-210ENST00000525878 DGKIO75912 1065 aa6.88□□□□□ -1.31
CSDE1-210ENST00000525878 GRIA2P42262 883 aa6.88□□□□□ -1.31
CSDE1-210ENST00000525878 MAP4K2Q12851 820 aa6.88□□□□□ -1.31
CSDE1-210ENST00000525878 CDSNQ15517 529 aa6.88□□□□□ -1.31
CSDE1-210ENST00000525878 CYP4F22Q6NT55 531 aa6.88□□□□□ -1.31
CSDE1-210ENST00000525878 PLEKHH3Q7Z736 793 aa6.88□□□□□ -1.31
CSDE1-210ENST00000525878 VPS37DQ86XT2 251 aa6.88□□□□□ -1.31
CSDE1-210ENST00000525878 ZSWIM3Q96MP5 696 aa6.88□□□□□ -1.31
CSDE1-210ENST00000525878 TMEM168Q9H0V1 697 aa6.88□□□□□ -1.31
CSDE1-210ENST00000525878 CYP7B1O75881 506 aa6.87□□□□□ -1.31
CSDE1-210ENST00000525878 CYP1A1P04798 512 aaPredicted RBP6.87□□□□□ -1.31
CSDE1-210ENST00000525878 COL6A1P12109 1028 aa6.87□□□□□ -1.31
CSDE1-210ENST00000525878 EPHB4P54760 987 aa6.87□□□□□ -1.31
CSDE1-210ENST00000525878 SLC10A6Q3KNW5 377 aa6.87□□□□□ -1.31
CSDE1-210ENST00000525878 PROSER1Q86XN7 944 aa6.87□□□□□ -1.31
CSDE1-210ENST00000525878 CHST13Q8NET6 341 aa6.87□□□□□ -1.31
CSDE1-210ENST00000525878 DNERQ8NFT8 737 aa6.87□□□□□ -1.31
CSDE1-210ENST00000525878 TTLL11Q8NHH1 800 aa6.87□□□□□ -1.31
CSDE1-210ENST00000525878 CHAMP1Q96JM3 812 aa6.87□□□□□ -1.31
CSDE1-210ENST00000525878 WRNIP1Q96S55 665 aa6.87□□□□□ -1.31
CSDE1-210ENST00000525878 PDGFDQ9GZP0 370 aaPredicted RBP6.87□□□□□ -1.31
CSDE1-210ENST00000525878 L2HGDHQ9H9P8 463 aa6.87□□□□□ -1.31
CSDE1-210ENST00000525878 CD248Q9HCU0 757 aa6.87□□□□□ -1.31
CSDE1-210ENST00000525878 GPR27Q9NS67 375 aa6.87□□□□□ -1.31
CSDE1-210ENST00000525878 MYOTQ9UBF9 498 aa6.87□□□□□ -1.31
CSDE1-210ENST00000525878 ASH2LQ9UBL3 628 aa6.87□□□□□ -1.31
CSDE1-210ENST00000525878 ST6GALNAC2Q9UJ37 374 aa6.87□□□□□ -1.31
CSDE1-210ENST00000525878 GPR42O15529 346 aa6.86□□□□□ -1.31
CSDE1-210ENST00000525878 GJB6O95452 261 aa6.86□□□□□ -1.31
CSDE1-210ENST00000525878 FGRP09769 529 aa6.86□□□□□ -1.31
CSDE1-210ENST00000525878 PPP2R2AP63151 447 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms