RNA–Protein interactions for RNA: ENST00000525685.5

CD44-219, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 728 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-219ENST00000525685 BTG4Q9NY30 223 aa5.65□□□□□ -1.5
CD44-219ENST00000525685 TIMM13Q9Y5L4 95 aaPredicted RBP5.65□□□□□ -1.5
CD44-219ENST00000525685 ATAD2BQ9ULI0 1458 aa5.64□□□□□ -1.51
CD44-219ENST00000525685 PEG3Q9GZU2 1588 aa5.64□□□□□ -1.51
CD44-219ENST00000525685 A0A1B0GTL3 188 aa5.64□□□□□ -1.51
CD44-219ENST00000525685 MEFVO15553 781 aaPredicted RBP5.64□□□□□ -1.51
CD44-219ENST00000525685 FPR2P25090 351 aa5.64□□□□□ -1.51
CD44-219ENST00000525685 BCL6P41182 706 aa5.64□□□□□ -1.51
CD44-219ENST00000525685 SLC6A11P48066 632 aa5.64□□□□□ -1.51
CD44-219ENST00000525685 MROH9Q5TGP6 573 aa5.64□□□□□ -1.51
CD44-219ENST00000525685 DENND5AQ6IQ26 1287 aa5.64□□□□□ -1.51
CD44-219ENST00000525685 RIOX2Q8IUF8 465 aa5.64□□□□□ -1.51
CD44-219ENST00000525685 ZDHHC14Q8IZN3 488 aa5.64□□□□□ -1.51
CD44-219ENST00000525685 ZBTB38Q8NAP3 1195 aaPredicted RBP5.64□□□□□ -1.51
CD44-219ENST00000525685 ZNF526Q8TF50 670 aaPredicted RBP5.64□□□□□ -1.51
CD44-219ENST00000525685 THAP3Q8WTV1 239 aaPredicted RBP5.64□□□□□ -1.51
CD44-219ENST00000525685 KCTD13Q8WZ19 329 aa5.64□□□□□ -1.51
CD44-219ENST00000525685 AP5M1Q9H0R1 490 aa5.64□□□□□ -1.51
CD44-219ENST00000525685 X6R8D5 127 aa5.64□□□□□ -1.51
CD44-219ENST00000525685 SMARCA2P51531 1590 aa5.63□□□□□ -1.51
CD44-219ENST00000525685 FOXD2O60548 495 aaPredicted RBP5.63□□□□□ -1.51
CD44-219ENST00000525685 CLSTN1O94985 981 aa5.63□□□□□ -1.51
CD44-219ENST00000525685 C8BP07358 591 aa5.63□□□□□ -1.51
CD44-219ENST00000525685 FAM153BP0C7A2 387 aa5.63□□□□□ -1.51
CD44-219ENST00000525685 KCNC1P48547 511 aa5.63□□□□□ -1.51
CD44-219ENST00000525685 GTF2A2P52657 109 aa5.63□□□□□ -1.51
CD44-219ENST00000525685 SLC35F1Q5T1Q4 408 aa5.63□□□□□ -1.51
CD44-219ENST00000525685 CEP68Q76N32 757 aa5.63□□□□□ -1.51
CD44-219ENST00000525685 MIB1Q86YT6 1006 aa5.63□□□□□ -1.51
CD44-219ENST00000525685 PPIL6Q8IXY8 311 aa5.63□□□□□ -1.51
CD44-219ENST00000525685 LILRB2Q8N423 598 aa5.63□□□□□ -1.51
CD44-219ENST00000525685 TMEM145Q8NBT3 493 aa5.63□□□□□ -1.51
CD44-219ENST00000525685 RCBTB1Q8NDN9 531 aa5.63□□□□□ -1.51
CD44-219ENST00000525685 ZSWIM2Q8NEG5 633 aa5.63□□□□□ -1.51
CD44-219ENST00000525685 CXorf38Q8TB03 319 aa5.63□□□□□ -1.51
CD44-219ENST00000525685 SH3TC2Q8TF17 1288 aa5.63□□□□□ -1.51
CD44-219ENST00000525685 SEC14L1Q92503 715 aa5.63□□□□□ -1.51
CD44-219ENST00000525685 ADAM7Q9H2U9 754 aa5.63□□□□□ -1.51
CD44-219ENST00000525685 FBXL7Q9UJT9 491 aa5.63□□□□□ -1.51
CD44-219ENST00000525685 NCAPD3P42695 1498 aa5.63□□□□□ -1.51
CD44-219ENST00000525685 HMGXB3Q12766 1538 aa5.63□□□□□ -1.51
CD44-219ENST00000525685 TRBV23-1A0A0A0MS06 115 aa5.62□□□□□ -1.51
CD44-219ENST00000525685 MYO1BO43795 1136 aa5.62□□□□□ -1.51
CD44-219ENST00000525685 PABPC1P11940 636 aaKnown RBP5.62□□□□□ -1.51
CD44-219ENST00000525685 LCP1P13796 627 aa5.62□□□□□ -1.51
CD44-219ENST00000525685 LTBRP36941 435 aa5.62□□□□□ -1.51
CD44-219ENST00000525685 BUD31P41223 144 aaPredicted RBP5.62□□□□□ -1.51
CD44-219ENST00000525685 GRIA2P42262 883 aa5.62□□□□□ -1.51
CD44-219ENST00000525685 C2orf27AQ580R0 203 aa5.62□□□□□ -1.51
CD44-219ENST00000525685 ZC3H12BQ5HYM0 836 aaKnown RBP5.62□□□□□ -1.51
CD44-219ENST00000525685 ETV3LQ6ZN32 361 aa5.62□□□□□ -1.51
CD44-219ENST00000525685 USP53Q70EK8 1073 aa5.62□□□□□ -1.51
CD44-219ENST00000525685 FRMD5Q7Z6J6 570 aa5.62□□□□□ -1.51
CD44-219ENST00000525685 SCUBE1Q8IWY4 988 aa5.62□□□□□ -1.51
CD44-219ENST00000525685 LINC00482Q8N8I6 264 aa5.62□□□□□ -1.51
CD44-219ENST00000525685 DDX11Q96FC9 970 aa5.62□□□□□ -1.51
CD44-219ENST00000525685 TRMT2BQ96GJ1 504 aaKnown RBP5.62□□□□□ -1.51
CD44-219ENST00000525685 TMEM169Q96HH4 297 aa5.62□□□□□ -1.51
CD44-219ENST00000525685 TEPSINQ96N21 525 aa5.62□□□□□ -1.51
CD44-219ENST00000525685 SPATA25Q9BR10 227 aa5.62□□□□□ -1.51
CD44-219ENST00000525685 ARHGEF4Q9NR80 690 aa5.62□□□□□ -1.51
CD44-219ENST00000525685 SPATA6Q9NWH7 488 aaPredicted RBP5.62□□□□□ -1.51
CD44-219ENST00000525685 PALD1Q9ULE6 856 aa5.62□□□□□ -1.51
CD44-219ENST00000525685 NPFFR2Q9Y5X5 522 aa5.62□□□□□ -1.51
CD44-219ENST00000525685 MRPL42Q9Y6G3 142 aaKnown RBP5.62□□□□□ -1.51
CD44-219ENST00000525685 CYP2C8P10632 490 aa5.61□□□□□ -1.51
CD44-219ENST00000525685 FGFR1P11362 822 aa5.61□□□□□ -1.51
CD44-219ENST00000525685 FAM209AQ5JX71 171 aa5.61□□□□□ -1.51
CD44-219ENST00000525685 ZBTB8AQ96BR9 441 aa5.61□□□□□ -1.51
CD44-219ENST00000525685 CHAMP1Q96JM3 812 aa5.61□□□□□ -1.51
CD44-219ENST00000525685 SYT3Q9BQG1 590 aa5.61□□□□□ -1.51
CD44-219ENST00000525685 GORASP1Q9BQQ3 440 aa5.61□□□□□ -1.51
CD44-219ENST00000525685 PCDHA2Q9Y5H9 948 aa5.61□□□□□ -1.51
CD44-219ENST00000525685 PTCH2Q9Y6C5 1203 aa5.61□□□□□ -1.51
CD44-219ENST00000525685 WIZO95785 1651 aa5.6□□□□□ -1.51
CD44-219ENST00000525685 BAZ1BQ9UIG0 1483 aaKnown RBP5.6□□□□□ -1.51
CD44-219ENST00000525685 TLDC2A0PJX2 215 aa5.6□□□□□ -1.51
CD44-219ENST00000525685 H7BY64 318 aa5.6□□□□□ -1.51
CD44-219ENST00000525685 SMARCA5O60264 1052 aaPredicted RBP5.6□□□□□ -1.51
CD44-219ENST00000525685 SYN1P17600 705 aa5.6□□□□□ -1.51
CD44-219ENST00000525685 SUMO1P63165 101 aaKnown RBP5.6□□□□□ -1.51
CD44-219ENST00000525685 MAP4K2Q12851 820 aa5.6□□□□□ -1.51
CD44-219ENST00000525685 LSAMPQ13449 338 aa5.6□□□□□ -1.51
CD44-219ENST00000525685 LONRF2Q1L5Z9 754 aa5.6□□□□□ -1.51
CD44-219ENST00000525685 YOD1Q5VVQ6 348 aaPredicted RBP5.6□□□□□ -1.51
CD44-219ENST00000525685 GIMAP6Q6P9H5 292 aa5.6□□□□□ -1.51
CD44-219ENST00000525685 MILR1Q7Z6M3 343 aa5.6□□□□□ -1.51
CD44-219ENST00000525685 HOMER1Q86YM7 354 aa5.6□□□□□ -1.51
CD44-219ENST00000525685 FAM126BQ8IXS8 530 aa5.6□□□□□ -1.51
CD44-219ENST00000525685 CARFQ8N187 725 aa5.6□□□□□ -1.51
CD44-219ENST00000525685 FAM26EQ8N5C1 309 aa5.6□□□□□ -1.51
CD44-219ENST00000525685 APPBP2Q92624 585 aa5.6□□□□□ -1.51
CD44-219ENST00000525685 DHRS4Q9BTZ2 278 aa5.6□□□□□ -1.51
CD44-219ENST00000525685 C11orf84Q9BUA3 381 aaPredicted RBP5.6□□□□□ -1.51
CD44-219ENST00000525685 PCDH18Q9HCL0 1135 aa5.6□□□□□ -1.51
CD44-219ENST00000525685 ESYT3A0FGR9 886 aa5.59□□□□□ -1.51
CD44-219ENST00000525685 ADCY3O60266 1144 aa5.59□□□□□ -1.51
CD44-219ENST00000525685 SMAD4Q13485 552 aaKnown RBP5.59□□□□□ -1.51
CD44-219ENST00000525685 NT5DC1Q5TFE4 455 aa5.59□□□□□ -1.51
CD44-219ENST00000525685 CD300LDQ6UXZ3 194 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms