RNA–Protein interactions for RNA: ENST00000525211.5

CD44-214, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 747 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-214ENST00000525211 MTFR1Q15390 333 aa7.42□□□□□ -1.22
CD44-214ENST00000525211 FOXD4L6Q3SYB3 417 aaPredicted RBP7.42□□□□□ -1.22
CD44-214ENST00000525211 C6orf132Q5T0Z8 1188 aa7.42□□□□□ -1.22
CD44-214ENST00000525211 TAPT1Q6NXT6 567 aa7.42□□□□□ -1.22
CD44-214ENST00000525211 FOXD4L3Q6VB84 417 aaPredicted RBP7.42□□□□□ -1.22
CD44-214ENST00000525211 ARMCX2Q7L311 632 aa7.42□□□□□ -1.22
CD44-214ENST00000525211 DPP9Q86TI2 863 aa7.42□□□□□ -1.22
CD44-214ENST00000525211 CCAR1Q8IX12 1150 aaKnown RBP7.42□□□□□ -1.22
CD44-214ENST00000525211 FBXO16Q8IX29 292 aaPredicted RBP7.42□□□□□ -1.22
CD44-214ENST00000525211 MORC4Q8TE76 937 aa7.42□□□□□ -1.22
CD44-214ENST00000525211 TBCKQ8TEA7 893 aa7.42□□□□□ -1.22
CD44-214ENST00000525211 LENG9Q96B70 501 aa7.42□□□□□ -1.22
CD44-214ENST00000525211 APBA2Q99767 749 aa7.42□□□□□ -1.22
CD44-214ENST00000525211 WDR11Q9BZH6 1224 aa7.42□□□□□ -1.22
CD44-214ENST00000525211 TMEM60Q9H2L4 133 aa7.42□□□□□ -1.22
CD44-214ENST00000525211 C6orf50Q9HD87 102 aa7.42□□□□□ -1.22
CD44-214ENST00000525211 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.42□□□□□ -1.22
CD44-214ENST00000525211 ZSCAN21Q9Y5A6 473 aaPredicted RBP7.42□□□□□ -1.22
CD44-214ENST00000525211 IVNS1ABPQ9Y6Y0 642 aa7.42□□□□□ -1.22
CD44-214ENST00000525211 PFASO15067 1338 aa7.42□□□□□ -1.22
CD44-214ENST00000525211 PLXNA1Q9UIW2 1896 aa7.42□□□□□ -1.22
CD44-214ENST00000525211 MYH7BA7E2Y1 1941 aa7.42□□□□□ -1.22
CD44-214ENST00000525211 IGLV3-22A0A075B6J6 115 aa7.41□□□□□ -1.22
CD44-214ENST00000525211 hCG_1984214I3L0E3 225 aa7.41□□□□□ -1.22
CD44-214ENST00000525211 STX6O43752 255 aa7.41□□□□□ -1.22
CD44-214ENST00000525211 ATP9AO75110 1047 aa7.41□□□□□ -1.22
CD44-214ENST00000525211 BRD1O95696 1058 aa7.41□□□□□ -1.22
CD44-214ENST00000525211 ATP2B1P20020 1258 aa7.41□□□□□ -1.22
CD44-214ENST00000525211 U2AF2P26368 475 aaKnown RBP eCLIP7.41□□□□□ -1.22
CD44-214ENST00000525211 COPB2P35606 906 aa7.41□□□□□ -1.22
CD44-214ENST00000525211 KRT2P35908 639 aa7.41□□□□□ -1.22
CD44-214ENST00000525211 SREBF1P36956 1147 aa7.41□□□□□ -1.22
CD44-214ENST00000525211 RGS2P41220 211 aa7.41□□□□□ -1.22
CD44-214ENST00000525211 ADCYAP1R1P41586 468 aa7.41□□□□□ -1.22
CD44-214ENST00000525211 MRPL12P52815 198 aaKnown RBP7.41□□□□□ -1.22
CD44-214ENST00000525211 ARHGAP4P98171 946 aa7.41□□□□□ -1.22
CD44-214ENST00000525211 IRF5Q13568 498 aa7.41□□□□□ -1.22
CD44-214ENST00000525211 KIF22Q14807 665 aa7.41□□□□□ -1.22
CD44-214ENST00000525211 ARHGEF16Q5VV41 709 aa7.41□□□□□ -1.22
CD44-214ENST00000525211 OLFML2BQ68BL8 750 aa7.41□□□□□ -1.22
CD44-214ENST00000525211 MCTP1Q6DN14 999 aa7.41□□□□□ -1.22
CD44-214ENST00000525211 CTU1Q7Z7A3 348 aaKnown RBP7.41□□□□□ -1.22
CD44-214ENST00000525211 VSIG10LQ86VR7 867 aa7.41□□□□□ -1.22
CD44-214ENST00000525211 MCF2L2Q86YR7 1114 aa7.41□□□□□ -1.22
CD44-214ENST00000525211 PARP9Q8IXQ6 854 aa7.41□□□□□ -1.22
CD44-214ENST00000525211 REXO1Q8N1G1 1221 aaKnown RBP7.41□□□□□ -1.22
CD44-214ENST00000525211 ZNF713Q8N859 430 aaPredicted RBP7.41□□□□□ -1.22
CD44-214ENST00000525211 WASF1Q92558 559 aa7.41□□□□□ -1.22
CD44-214ENST00000525211 TINF2Q9BSI4 451 aa7.41□□□□□ -1.22
CD44-214ENST00000525211 ADAM33Q9BZ11 813 aa7.41□□□□□ -1.22
CD44-214ENST00000525211 MCOLN1Q9GZU1 580 aa7.41□□□□□ -1.22
CD44-214ENST00000525211 CWC22Q9HCG8 908 aaKnown RBP7.41□□□□□ -1.22
CD44-214ENST00000525211 RBM27Q9P2N5 1060 aaKnown RBP7.41□□□□□ -1.22
CD44-214ENST00000525211 LHX6Q9UPM6 363 aa7.41□□□□□ -1.22
CD44-214ENST00000525211 UBIAD1Q9Y5Z9 338 aa7.41□□□□□ -1.22
CD44-214ENST00000525211 MYADML2A6NDP7 307 aa7.4□□□□□ -1.22
CD44-214ENST00000525211 INHAP05111 366 aa7.4□□□□□ -1.22
CD44-214ENST00000525211 XRCC5P13010 732 aaKnown RBP7.4□□□□□ -1.22
CD44-214ENST00000525211 CYBAP13498 195 aa7.4□□□□□ -1.22
CD44-214ENST00000525211 ANP32AP39687 249 aaKnown RBP7.4□□□□□ -1.22
CD44-214ENST00000525211 BECN1Q14457 450 aa7.4□□□□□ -1.22
CD44-214ENST00000525211 ZNF174Q15697 407 aa7.4□□□□□ -1.22
CD44-214ENST00000525211 IL17AQ16552 155 aa7.4□□□□□ -1.22
CD44-214ENST00000525211 LY6KQ17RY6 165 aa7.4□□□□□ -1.22
CD44-214ENST00000525211 MAP3K21Q5TCX8 1036 aa7.4□□□□□ -1.22
CD44-214ENST00000525211 CCDC62Q6P9F0 684 aa7.4□□□□□ -1.22
CD44-214ENST00000525211 C4orf32Q8N8J7 132 aa7.4□□□□□ -1.22
CD44-214ENST00000525211 CCDC148Q8NFR7 591 aa7.4□□□□□ -1.22
CD44-214ENST00000525211 RAET1EQ8TD07 263 aa7.4□□□□□ -1.22
CD44-214ENST00000525211 NSUN6Q8TEA1 469 aaKnown RBP7.4□□□□□ -1.22
CD44-214ENST00000525211 PPP1R13LQ8WUF5 828 aa7.4□□□□□ -1.22
CD44-214ENST00000525211 SOCS4Q8WXH5 440 aa7.4□□□□□ -1.22
CD44-214ENST00000525211 IPO9Q96P70 1041 aaKnown RBP7.4□□□□□ -1.22
CD44-214ENST00000525211 UNC93B1Q9H1C4 597 aa7.4□□□□□ -1.22
CD44-214ENST00000525211 PRDM10Q9NQV6 1147 aa7.4□□□□□ -1.22
CD44-214ENST00000525211 PKD2L1Q9P0L9 805 aa7.4□□□□□ -1.22
CD44-214ENST00000525211 DIS3Q9Y2L1 958 aaKnown RBP7.4□□□□□ -1.22
CD44-214ENST00000525211 PCDHB6Q9Y5E3 794 aa7.4□□□□□ -1.22
CD44-214ENST00000525211 CLIC4Q9Y696 253 aa7.4□□□□□ -1.22
CD44-214ENST00000525211 H3BQV1 296 aa7.39□□□□□ -1.23
CD44-214ENST00000525211 MEIS1O00470 390 aa7.39□□□□□ -1.23
CD44-214ENST00000525211 CTAGE5O15320 804 aa7.39□□□□□ -1.23
CD44-214ENST00000525211 F13A1P00488 732 aa7.39□□□□□ -1.23
CD44-214ENST00000525211 CYP3A4P08684 503 aa7.39□□□□□ -1.23
CD44-214ENST00000525211 ZSCAN22P10073 491 aaPredicted RBP7.39□□□□□ -1.23
CD44-214ENST00000525211 SMPD1P17405 629 aa7.39□□□□□ -1.23
CD44-214ENST00000525211 GNA11P29992 359 aa7.39□□□□□ -1.23
CD44-214ENST00000525211 GRK4P32298 578 aa7.39□□□□□ -1.23
CD44-214ENST00000525211 CIITAP33076 1130 aa7.39□□□□□ -1.23
CD44-214ENST00000525211 GRIN1Q05586 938 aa7.39□□□□□ -1.23
CD44-214ENST00000525211 ITGB3BPQ13352 177 aaPredicted RBP7.39□□□□□ -1.23
CD44-214ENST00000525211 AP3B2Q13367 1082 aa7.39□□□□□ -1.23
CD44-214ENST00000525211 ACVR2BQ13705 512 aa7.39□□□□□ -1.23
CD44-214ENST00000525211 TRIM29Q14134 588 aa7.39□□□□□ -1.23
CD44-214ENST00000525211 NONOQ15233 471 aaKnown RBP eCLIP7.39□□□□□ -1.23
CD44-214ENST00000525211 LETM2Q2VYF4 491 aa7.39□□□□□ -1.23
CD44-214ENST00000525211 PCNX4Q63HM2 1172 aa7.39□□□□□ -1.23
CD44-214ENST00000525211 SEPT14Q6ZU15 432 aa7.39□□□□□ -1.23
CD44-214ENST00000525211 KRT25Q7Z3Z0 450 aa7.39□□□□□ -1.23
CD44-214ENST00000525211 NOSTRINQ8IVI9 506 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms