RNA–Protein interactions for RNA: ENST00000524927.1

NEDD8-203, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2 BASIC

Gene NEDD8, Length 653 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-203ENST00000524927 MYO9BQ13459 2157 aa9.09□□□□□ -0.95
NEDD8-203ENST00000524927 BTBD11A6QL63 1104 aa9.09□□□□□ -0.95
NEDD8-203ENST00000524927 PAGE1O75459 146 aa9.09□□□□□ -0.95
NEDD8-203ENST00000524927 UFL1O94874 794 aa9.09□□□□□ -0.95
NEDD8-203ENST00000524927 B3GALT4O96024 378 aa9.09□□□□□ -0.95
NEDD8-203ENST00000524927 ALADP13716 330 aa9.09□□□□□ -0.95
NEDD8-203ENST00000524927 EPHA1P21709 976 aa9.09□□□□□ -0.95
NEDD8-203ENST00000524927 DNAJA1P31689 397 aaKnown RBP9.09□□□□□ -0.95
NEDD8-203ENST00000524927 EIF4A3P38919 411 aaKnown RBP9.09□□□□□ -0.95
NEDD8-203ENST00000524927 PAK2Q13177 524 aa9.09□□□□□ -0.95
NEDD8-203ENST00000524927 PCNX4Q63HM2 1172 aa9.09□□□□□ -0.95
NEDD8-203ENST00000524927 FAM117BQ6P1L5 589 aa9.09□□□□□ -0.95
NEDD8-203ENST00000524927 KIAA0825Q8IV33 1275 aa9.09□□□□□ -0.95
NEDD8-203ENST00000524927 SLC43A3Q8NBI5 491 aa9.09□□□□□ -0.95
NEDD8-203ENST00000524927 CELF1Q92879 486 aaKnown RBP9.09□□□□□ -0.95
NEDD8-203ENST00000524927 RNPC3Q96LT9 517 aaKnown RBP9.09□□□□□ -0.95
NEDD8-203ENST00000524927 TANGO6Q9C0B7 1094 aa9.09□□□□□ -0.95
NEDD8-203ENST00000524927 PPME1Q9Y570 386 aa9.09□□□□□ -0.95
NEDD8-203ENST00000524927 DNAH12Q6ZR08 3092 aa9.08□□□□□ -0.96
NEDD8-203ENST00000524927 H3BRJ5 948 aa9.08□□□□□ -0.96
NEDD8-203ENST00000524927 PDHXO00330 501 aa9.08□□□□□ -0.96
NEDD8-203ENST00000524927 TNPO2O14787 897 aaKnown RBP9.08□□□□□ -0.96
NEDD8-203ENST00000524927 HCLS1P14317 486 aaPredicted RBP9.08□□□□□ -0.96
NEDD8-203ENST00000524927 IL13P35225 146 aa9.08□□□□□ -0.96
NEDD8-203ENST00000524927 ARL4DP49703 201 aa9.08□□□□□ -0.96
NEDD8-203ENST00000524927 RAC1P63000 192 aa9.08□□□□□ -0.96
NEDD8-203ENST00000524927 FAM160A1Q05DH4 1040 aa9.08□□□□□ -0.96
NEDD8-203ENST00000524927 ACAP1Q15027 740 aa9.08□□□□□ -0.96
NEDD8-203ENST00000524927 STRIP1Q5VSL9 837 aa9.08□□□□□ -0.96
NEDD8-203ENST00000524927 ERO1BQ86YB8 467 aa9.08□□□□□ -0.96
NEDD8-203ENST00000524927 PHC3Q8NDX5 983 aa9.08□□□□□ -0.96
NEDD8-203ENST00000524927 SLC7A3Q8WY07 619 aa9.08□□□□□ -0.96
NEDD8-203ENST00000524927 HERVK_113Q902F9 699 aa9.08□□□□□ -0.96
NEDD8-203ENST00000524927 CBX8Q9HC52 389 aa9.08□□□□□ -0.96
NEDD8-203ENST00000524927 MAST2Q6P0Q8 1798 aa9.08□□□□□ -0.96
NEDD8-203ENST00000524927 CFAP47Q6ZTR5 3102 aa9.07□□□□□ -0.96
NEDD8-203ENST00000524927 ACACBO00763 2458 aa9.07□□□□□ -0.96
NEDD8-203ENST00000524927 GNAT3A8MTJ3 354 aa9.07□□□□□ -0.96
NEDD8-203ENST00000524927 LINC01387J3KSC0 135 aa9.07□□□□□ -0.96
NEDD8-203ENST00000524927 PF4P02776 101 aa9.07□□□□□ -0.96
NEDD8-203ENST00000524927 NME2P22392 152 aa9.07□□□□□ -0.96
NEDD8-203ENST00000524927 ARID5AQ03989 594 aa9.07□□□□□ -0.96
NEDD8-203ENST00000524927 PPIL2Q13356 520 aa9.07□□□□□ -0.96
NEDD8-203ENST00000524927 DLGAP5Q15398 846 aa9.07□□□□□ -0.96
NEDD8-203ENST00000524927 SNAP47Q5SQN1 464 aa9.07□□□□□ -0.96
NEDD8-203ENST00000524927 TXNDC11Q6PKC3 985 aa9.07□□□□□ -0.96
NEDD8-203ENST00000524927 TTLL7Q6ZT98 887 aa9.07□□□□□ -0.96
NEDD8-203ENST00000524927 WFDC8Q8IUA0 241 aa9.07□□□□□ -0.96
NEDD8-203ENST00000524927 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.07□□□□□ -0.962e-13■■□□□ 13.4
NEDD8-203ENST00000524927 WFDC12Q8WWY7 111 aa9.07□□□□□ -0.96
NEDD8-203ENST00000524927 GPRASP2Q96D09 838 aa9.07□□□□□ -0.96
NEDD8-203ENST00000524927 PARK7Q99497 189 aaKnown RBP9.07□□□□□ -0.96
NEDD8-203ENST00000524927 MXD3Q9BW11 206 aa9.07□□□□□ -0.96
NEDD8-203ENST00000524927 ADAMTS1Q9UHI8 967 aa9.07□□□□□ -0.96
NEDD8-203ENST00000524927 COG5Q9UP83 839 aa9.07□□□□□ -0.96
NEDD8-203ENST00000524927 FASNP49327 2511 aaKnown RBP9.07□□□□□ -0.96
NEDD8-203ENST00000524927 SETXQ7Z333 2677 aaKnown RBP9.07□□□□□ -0.96
NEDD8-203ENST00000524927 LRRC37A2A6NM11 1700 aa9.06□□□□□ -0.96
NEDD8-203ENST00000524927 MYO1BO43795 1136 aa9.06□□□□□ -0.96
NEDD8-203ENST00000524927 NOS3P29474 1203 aa9.06□□□□□ -0.96
NEDD8-203ENST00000524927 RPS26P62854 115 aaKnown RBP9.06□□□□□ -0.96
NEDD8-203ENST00000524927 GSTM4Q03013 218 aa9.06□□□□□ -0.96
NEDD8-203ENST00000524927 CAMK2GQ13555 558 aaPredicted RBP9.06□□□□□ -0.96
NEDD8-203ENST00000524927 AGMOQ6ZNB7 445 aa9.06□□□□□ -0.96
NEDD8-203ENST00000524927 SULF2Q8IWU5 870 aa9.06□□□□□ -0.96
NEDD8-203ENST00000524927 NGEFQ8N5V2 710 aa9.06□□□□□ -0.96
NEDD8-203ENST00000524927 BADQ92934 168 aa9.06□□□□□ -0.96
NEDD8-203ENST00000524927 COA7Q96BR5 231 aa9.06□□□□□ -0.96
NEDD8-203ENST00000524927 CEMIPQ8WUJ3 1361 aa9.06□□□□□ -0.96
NEDD8-203ENST00000524927 COL4A1P02462 1669 aa9.06□□□□□ -0.96
NEDD8-203ENST00000524927 CHD9Q3L8U1 2897 aa9.06□□□□□ -0.96
NEDD8-203ENST00000524927 NCOR2Q9Y618 2525 aa9.05□□□□□ -0.96
NEDD8-203ENST00000524927 ID4P47928 161 aa9.05□□□□□ -0.96
NEDD8-203ENST00000524927 LMNB2Q03252 620 aa9.05□□□□□ -0.96
NEDD8-203ENST00000524927 RASA3Q14644 834 aa9.05□□□□□ -0.96
NEDD8-203ENST00000524927 LRRC14Q15048 493 aa9.05□□□□□ -0.96
NEDD8-203ENST00000524927 SF3B3Q15393 1217 aaKnown RBP9.05□□□□□ -0.96
NEDD8-203ENST00000524927 GOLM1Q8NBJ4 401 aa9.05□□□□□ -0.96
NEDD8-203ENST00000524927 MEGF10Q96KG7 1140 aa9.05□□□□□ -0.96
NEDD8-203ENST00000524927 RHOVQ96L33 236 aa9.05□□□□□ -0.96
NEDD8-203ENST00000524927 MFSD14AQ96MC6 490 aa9.05□□□□□ -0.96
NEDD8-203ENST00000524927 PRRX2Q99811 253 aa9.05□□□□□ -0.96
NEDD8-203ENST00000524927 EMILIN2Q9BXX0 1053 aa9.05□□□□□ -0.96
NEDD8-203ENST00000524927 CD320Q9NPF0 282 aa9.05□□□□□ -0.96
NEDD8-203ENST00000524927 CYP8B1Q9UNU6 501 aa9.05□□□□□ -0.96
NEDD8-203ENST00000524927 SUPT16HQ9Y5B9 1047 aaKnown RBP9.05□□□□□ -0.96
NEDD8-203ENST00000524927 RIF1Q5UIP0 2472 aaKnown RBP9.05□□□□□ -0.96
NEDD8-203ENST00000524927 REV3LO60673 3130 aa9.05□□□□□ -0.96
NEDD8-203ENST00000524927 SH3TC1Q8TE82 1336 aa9.05□□□□□ -0.96
NEDD8-203ENST00000524927 TFE3P19532 575 aaPredicted RBP9.04□□□□□ -0.96
NEDD8-203ENST00000524927 ATP2B1P20020 1258 aa9.04□□□□□ -0.96
NEDD8-203ENST00000524927 BMP6P22004 513 aa9.04□□□□□ -0.96
NEDD8-203ENST00000524927 ARNTP27540 789 aa9.04□□□□□ -0.96
NEDD8-203ENST00000524927 RPS8P62241 208 aaKnown RBP9.04□□□□□ -0.96
NEDD8-203ENST00000524927 MAP3K21Q5TCX8 1036 aa9.04□□□□□ -0.96
NEDD8-203ENST00000524927 DIEXFQ68CQ4 756 aaKnown RBP9.04□□□□□ -0.96
NEDD8-203ENST00000524927 FBXL19Q6PCT2 694 aa9.04□□□□□ -0.96
NEDD8-203ENST00000524927 JARID2Q92833 1246 aaPredicted RBP9.04□□□□□ -0.96
NEDD8-203ENST00000524927 MIR1-1HGQ9H1L0 117 aa9.04□□□□□ -0.96
NEDD8-203ENST00000524927 SNCAIPQ9Y6H5 919 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms