RNA–Protein interactions for RNA: ENST00000523768.5

TNPO1-213, Transcript of transportin 1, humanhuman

TSL 2 BASIC

Gene TNPO1, Length 2,632 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNPO1-213ENST00000523768 GPS2Q13227 327 aa12.55□□□□□ -0.4
TNPO1-213ENST00000523768 LRRC41Q15345 812 aa12.55□□□□□ -0.4
TNPO1-213ENST00000523768 MOXD1Q6UVY6 613 aa12.55□□□□□ -0.4
TNPO1-213ENST00000523768 TRIM58Q8NG06 486 aa12.55□□□□□ -0.4
TNPO1-213ENST00000523768 PANK4Q9NVE7 773 aa12.55□□□□□ -0.4
TNPO1-213ENST00000523768 ADAMTSL1Q8N6G6 1762 aa12.54□□□□□ -0.4
TNPO1-213ENST00000523768 TARSL2A2RTX5 802 aaKnown RBP12.54□□□□□ -0.4
TNPO1-213ENST00000523768 CCDC66A2RUB6 948 aa12.54□□□□□ -0.4
TNPO1-213ENST00000523768 H3BQF6 201 aa12.54□□□□□ -0.4
TNPO1-213ENST00000523768 EIF3JO75822 258 aaKnown RBP12.54□□□□□ -0.4
TNPO1-213ENST00000523768 PLEKP08567 350 aaPredicted RBP12.54□□□□□ -0.4
TNPO1-213ENST00000523768 KIF11P52732 1056 aa12.54□□□□□ -0.4
TNPO1-213ENST00000523768 QRICH1Q2TAL8 776 aa12.54□□□□□ -0.4
TNPO1-213ENST00000523768 KRT26Q7Z3Y9 468 aa12.54□□□□□ -0.4
TNPO1-213ENST00000523768 NLGN1Q8N2Q7 840 aa12.54□□□□□ -0.4
TNPO1-213ENST00000523768 CEP63Q96MT8 703 aa12.54□□□□□ -0.4
TNPO1-213ENST00000523768 SH2D4AQ9H788 454 aa12.54□□□□□ -0.4
TNPO1-213ENST00000523768 PCDHA2Q9Y5H9 948 aa12.54□□□□□ -0.4
TNPO1-213ENST00000523768 PCDHA13Q9Y5I0 950 aa12.54□□□□□ -0.4
TNPO1-213ENST00000523768 COL4A3BPQ9Y5P4 624 aa12.54□□□□□ -0.4
TNPO1-213ENST00000523768 SRGAP2O75044 1071 aa12.54□□□□□ -0.4
TNPO1-213ENST00000523768 MARSP56192 900 aaKnown RBP12.54□□□□□ -0.4
TNPO1-213ENST00000523768 TAF3Q5VWG9 929 aa12.54□□□□□ -0.4
TNPO1-213ENST00000523768 PODNQ7Z5L7 613 aa12.54□□□□□ -0.4
TNPO1-213ENST00000523768 ZFPM1Q8IX07 1006 aa12.54□□□□□ -0.4
TNPO1-213ENST00000523768 CCDC65Q8IXS2 484 aa12.54□□□□□ -0.4
TNPO1-213ENST00000523768 IFIH1Q9BYX4 1025 aaKnown RBP12.54□□□□□ -0.4
TNPO1-213ENST00000523768 KANSL2Q9H9L4 492 aa12.54□□□□□ -0.4
TNPO1-213ENST00000523768 JRKLQ9Y4A0 524 aa12.54□□□□□ -0.4
TNPO1-213ENST00000523768 ARFGEF1Q9Y6D6 1849 aa12.53□□□□□ -0.4
TNPO1-213ENST00000523768 SSU72P8A0A1W2PR75 194 aa12.53□□□□□ -0.4
TNPO1-213ENST00000523768 LRRC53A6NM62 1247 aa12.53□□□□□ -0.4
TNPO1-213ENST00000523768 USP17L15C9J2P7 530 aa12.53□□□□□ -0.4
TNPO1-213ENST00000523768 USP17L13C9JLJ4 530 aa12.53□□□□□ -0.4
TNPO1-213ENST00000523768 USP17L11C9JVI0 530 aa12.53□□□□□ -0.4
TNPO1-213ENST00000523768 USP17L18D6R9N7 530 aa12.53□□□□□ -0.4
TNPO1-213ENST00000523768 USP17L22D6RA61 530 aa12.53□□□□□ -0.4
TNPO1-213ENST00000523768 USP17L17D6RBQ6 530 aa12.53□□□□□ -0.4
TNPO1-213ENST00000523768 USP17L19D6RCP7 530 aa12.53□□□□□ -0.4
TNPO1-213ENST00000523768 USP17L20D6RJB6 530 aa12.53□□□□□ -0.4
TNPO1-213ENST00000523768 GNA14O95837 355 aa12.53□□□□□ -0.4
TNPO1-213ENST00000523768 EEF2P13639 858 aaKnown RBP12.53□□□□□ -0.4
TNPO1-213ENST00000523768 PRLRP16471 622 aa12.53□□□□□ -0.4
TNPO1-213ENST00000523768 EIF4A3P38919 411 aaKnown RBP12.53□□□□□ -0.4
TNPO1-213ENST00000523768 FKBP1AP62942 108 aaKnown RBP12.53□□□□□ -0.4
TNPO1-213ENST00000523768 USP17L24Q0WX57 530 aa12.53□□□□□ -0.4
TNPO1-213ENST00000523768 KCNMA1Q12791 1236 aa12.53□□□□□ -0.4
TNPO1-213ENST00000523768 AP3B2Q13367 1082 aa12.53□□□□□ -0.4
TNPO1-213ENST00000523768 MAPK8IP2Q13387 824 aaPredicted RBP12.53□□□□□ -0.4
TNPO1-213ENST00000523768 CASP8Q14790 479 aa12.53□□□□□ -0.4
TNPO1-213ENST00000523768 ASTE1Q2TB18 679 aaPredicted RBP12.53□□□□□ -0.4
TNPO1-213ENST00000523768 MCTP2Q6DN12 878 aa12.53□□□□□ -0.4
TNPO1-213ENST00000523768 PDXDC1Q6P996 788 aa12.53□□□□□ -0.4
TNPO1-213ENST00000523768 USP17L6PQ6QN14 398 aa12.53□□□□□ -0.4
TNPO1-213ENST00000523768 NEK11Q8NG66 645 aa12.53□□□□□ -0.4
TNPO1-213ENST00000523768 GJA10Q969M2 543 aa12.53□□□□□ -0.4
TNPO1-213ENST00000523768 IDI2Q9BXS1 227 aa12.53□□□□□ -0.4
TNPO1-213ENST00000523768 ANO3Q9BYT9 981 aa12.53□□□□□ -0.4
TNPO1-213ENST00000523768 PDE11AQ9HCR9 933 aa12.53□□□□□ -0.4
TNPO1-213ENST00000523768 PCDHA1Q9Y5I3 950 aa12.53□□□□□ -0.4
TNPO1-213ENST00000523768 MACROD2A1Z1Q3 448 aa12.53□□□□□ -0.4
TNPO1-213ENST00000523768 G3V3G9 751 aa12.53□□□□□ -0.4
TNPO1-213ENST00000523768 PJA2O43164 708 aa12.53□□□□□ -0.4
TNPO1-213ENST00000523768 TACC1O75410 805 aa12.53□□□□□ -0.4
TNPO1-213ENST00000523768 NPM3O75607 178 aaKnown RBP12.53□□□□□ -0.4
TNPO1-213ENST00000523768 PLA2G4BP0C869 781 aa12.53□□□□□ -0.4
TNPO1-213ENST00000523768 SLC1A4P43007 532 aa12.53□□□□□ -0.4
TNPO1-213ENST00000523768 HDLBPQ00341 1268 aaKnown RBP12.53□□□□□ -0.4
TNPO1-213ENST00000523768 DCAF8Q5TAQ9 597 aa12.53□□□□□ -0.4
TNPO1-213ENST00000523768 RRAGAQ7L523 313 aa12.53□□□□□ -0.4
TNPO1-213ENST00000523768 SLFN12Q8IYM2 578 aa12.53□□□□□ -0.4
TNPO1-213ENST00000523768 CRYGNQ8WXF5 182 aa12.53□□□□□ -0.4
TNPO1-213ENST00000523768 NUCKS1Q9H1E3 243 aaKnown RBP12.53□□□□□ -0.4
TNPO1-213ENST00000523768 SUGCTQ9HAC7 445 aa12.53□□□□□ -0.4
TNPO1-213ENST00000523768 PSD3Q9NYI0 1048 aa12.53□□□□□ -0.4
TNPO1-213ENST00000523768 PI4KBQ9UBF8 816 aa12.53□□□□□ -0.4
TNPO1-213ENST00000523768 KIAA1024Q9UPX6 916 aa12.53□□□□□ -0.4
TNPO1-213ENST00000523768 SIPA1L1O43166 1804 aa12.52□□□□□ -0.4
TNPO1-213ENST00000523768 FRMD3A2A2Y4 597 aa12.52□□□□□ -0.4
TNPO1-213ENST00000523768 E9PMD0 336 aa12.52□□□□□ -0.4
TNPO1-213ENST00000523768 TRAF5O00463 557 aa12.52□□□□□ -0.4
TNPO1-213ENST00000523768 TRIM37O94972 964 aa12.52□□□□□ -0.4
TNPO1-213ENST00000523768 SLURP2P0DP57 97 aa12.52□□□□□ -0.4
TNPO1-213ENST00000523768 PDE6BP35913 854 aa12.52□□□□□ -0.4
TNPO1-213ENST00000523768 CDC37Q16543 378 aaPredicted RBP12.52□□□□□ -0.4
TNPO1-213ENST00000523768 CERKLQ49MI3 558 aaPredicted RBP12.52□□□□□ -0.4
TNPO1-213ENST00000523768 SLFN13Q68D06 897 aa12.52□□□□□ -0.4
TNPO1-213ENST00000523768 ZNF572Q7Z3I7 529 aaPredicted RBP12.52□□□□□ -0.4
TNPO1-213ENST00000523768 ZC3H3Q8IXZ2 948 aaKnown RBP12.52□□□□□ -0.4
TNPO1-213ENST00000523768 SYN2Q92777 582 aaPredicted RBP12.52□□□□□ -0.4
TNPO1-213ENST00000523768 TMX4Q9H1E5 349 aaPredicted RBP12.52□□□□□ -0.4
TNPO1-213ENST00000523768 DEF6Q9H4E7 631 aa12.52□□□□□ -0.4
TNPO1-213ENST00000523768 SNX12Q9UMY4 172 aa12.52□□□□□ -0.4
TNPO1-213ENST00000523768 PITPNM2Q9BZ72 1349 aa12.52□□□□□ -0.4
TNPO1-213ENST00000523768 MEIS2O14770 477 aa12.52□□□□□ -0.41
TNPO1-213ENST00000523768 CYP11B2P19099 503 aa12.52□□□□□ -0.41
TNPO1-213ENST00000523768 ITIH3Q06033 890 aa12.52□□□□□ -0.41
TNPO1-213ENST00000523768 IQCEQ6IPM2 695 aa12.52□□□□□ -0.41
TNPO1-213ENST00000523768 TATDN1Q6P1N9 297 aa12.52□□□□□ -0.41
TNPO1-213ENST00000523768 EXOC4Q96A65 974 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms