RNA–Protein interactions for RNA: ENST00000523387.5

CSMD1-212, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 2

Gene CSMD1, Length 3,989 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-212ENST00000523387 TRIM9Q9C026 710 aa9.89□□□□□ -0.83
CSMD1-212ENST00000523387 ZNF287Q9HBT7 754 aa9.89□□□□□ -0.83
CSMD1-212ENST00000523387 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.89□□□□□ -0.83
CSMD1-212ENST00000523387 GRID2IPA4D2P6 1211 aa9.89□□□□□ -0.83
CSMD1-212ENST00000523387 WNT7AO00755 349 aa9.89□□□□□ -0.83
CSMD1-212ENST00000523387 PDE6BP35913 854 aa9.89□□□□□ -0.83
CSMD1-212ENST00000523387 SLCO1A2P46721 670 aa9.89□□□□□ -0.83
CSMD1-212ENST00000523387 ZKSCAN8Q15776 578 aaPredicted RBP9.89□□□□□ -0.83
CSMD1-212ENST00000523387 HLFQ16534 295 aa9.89□□□□□ -0.83
CSMD1-212ENST00000523387 PDXDC1Q6P996 788 aa9.89□□□□□ -0.83
CSMD1-212ENST00000523387 NEK8Q86SG6 692 aa9.89□□□□□ -0.83
CSMD1-212ENST00000523387 FBF1Q8TES7 1133 aa9.89□□□□□ -0.83
CSMD1-212ENST00000523387 SPDL1Q96EA4 605 aa9.89□□□□□ -0.83
CSMD1-212ENST00000523387 FAM114A2Q9NRY5 505 aa9.89□□□□□ -0.83
CSMD1-212ENST00000523387 BIN2Q9UBW5 565 aaPredicted RBP9.89□□□□□ -0.83
CSMD1-212ENST00000523387 AMFRQ9UKV5 643 aa9.89□□□□□ -0.83
CSMD1-212ENST00000523387 GRIN2DO15399 1336 aa9.88□□□□□ -0.83
CSMD1-212ENST00000523387 DAPK3O43293 454 aa9.88□□□□□ -0.83
CSMD1-212ENST00000523387 H2AFZP0C0S5 128 aa9.88□□□□□ -0.83
CSMD1-212ENST00000523387 ABCB4P21439 1286 aa9.88□□□□□ -0.83
CSMD1-212ENST00000523387 FECHP22830 423 aa9.88□□□□□ -0.83
CSMD1-212ENST00000523387 HSD17B3P37058 310 aa9.88□□□□□ -0.83
CSMD1-212ENST00000523387 PLTPP55058 493 aa9.88□□□□□ -0.83
CSMD1-212ENST00000523387 FKBP3Q00688 224 aaKnown RBP9.88□□□□□ -0.83
CSMD1-212ENST00000523387 ITIH3Q06033 890 aa9.88□□□□□ -0.83
CSMD1-212ENST00000523387 UBE4AQ14139 1066 aa9.88□□□□□ -0.83
CSMD1-212ENST00000523387 ZRSR2Q15696 482 aaKnown RBP9.88□□□□□ -0.83
CSMD1-212ENST00000523387 SEPT7Q16181 437 aaKnown RBP9.88□□□□□ -0.83
CSMD1-212ENST00000523387 CCDC6Q16204 474 aa9.88□□□□□ -0.83
CSMD1-212ENST00000523387 PKN1Q16512 942 aa9.88□□□□□ -0.83
CSMD1-212ENST00000523387 FAM83BQ5T0W9 1011 aa9.88□□□□□ -0.83
CSMD1-212ENST00000523387 H2AFVQ71UI9 128 aa9.88□□□□□ -0.83
CSMD1-212ENST00000523387 STAG2Q8N3U4 1231 aa9.88□□□□□ -0.83
CSMD1-212ENST00000523387 CTNNBL1Q8WYA6 563 aaPredicted RBP9.88□□□□□ -0.83
CSMD1-212ENST00000523387 LARP4BQ92615 738 aaKnown RBP9.88□□□□□ -0.83
CSMD1-212ENST00000523387 MTMR8Q96EF0 704 aa9.88□□□□□ -0.83
CSMD1-212ENST00000523387 PBKQ96KB5 322 aa9.88□□□□□ -0.83
CSMD1-212ENST00000523387 AK8Q96MA6 479 aa9.88□□□□□ -0.83
CSMD1-212ENST00000523387 NAP1L3Q99457 506 aaPredicted RBP9.88□□□□□ -0.83
CSMD1-212ENST00000523387 FMO2Q99518 471 aa9.88□□□□□ -0.83
CSMD1-212ENST00000523387 TRIM7Q9C029 511 aa9.88□□□□□ -0.83
CSMD1-212ENST00000523387 PAX7P23759 505 aa9.88□□□□□ -0.83
CSMD1-212ENST00000523387 CDC37Q16543 378 aaPredicted RBP9.88□□□□□ -0.83
CSMD1-212ENST00000523387 PREPLQ4J6C6 727 aaPredicted RBP9.88□□□□□ -0.83
CSMD1-212ENST00000523387 INTS8Q75QN2 995 aaKnown RBP9.88□□□□□ -0.83
CSMD1-212ENST00000523387 TAOK1Q7L7X3 1001 aa9.88□□□□□ -0.83
CSMD1-212ENST00000523387 SYCE1Q8N0S2 351 aa9.88□□□□□ -0.83
CSMD1-212ENST00000523387 TLR10Q9BXR5 811 aa9.88□□□□□ -0.83
CSMD1-212ENST00000523387 TMEM60Q9H2L4 133 aa9.88□□□□□ -0.83
CSMD1-212ENST00000523387 KANSL2Q9H9L4 492 aa9.88□□□□□ -0.83
CSMD1-212ENST00000523387 NOP53Q9NZM5 478 aaKnown RBP9.88□□□□□ -0.83
CSMD1-212ENST00000523387 COL4A3BPQ9Y5P4 624 aa9.88□□□□□ -0.83
CSMD1-212ENST00000523387 A0A1W2PQJ5 194 aa9.88□□□□□ -0.83
CSMD1-212ENST00000523387 LAD1O00515 517 aa9.88□□□□□ -0.83
CSMD1-212ENST00000523387 KLRC1P26715 233 aa9.88□□□□□ -0.83
CSMD1-212ENST00000523387 SCTRP47872 440 aa9.88□□□□□ -0.83
CSMD1-212ENST00000523387 FAM26FQ5R3K3 315 aa9.88□□□□□ -0.83
CSMD1-212ENST00000523387 VSIG1Q86XK7 387 aa9.88□□□□□ -0.83
CSMD1-212ENST00000523387 IRF2BP1Q8IU81 584 aa9.88□□□□□ -0.83
CSMD1-212ENST00000523387 P3H4Q92791 437 aa9.88□□□□□ -0.83
CSMD1-212ENST00000523387 DDX20Q9UHI6 824 aaKnown RBP9.88□□□□□ -0.83
CSMD1-212ENST00000523387 AMACRQ9UHK6 382 aa9.88□□□□□ -0.83
CSMD1-212ENST00000523387 TPX2Q9ULW0 747 aaKnown RBP9.88□□□□□ -0.83
CSMD1-212ENST00000523387 NIP7Q9Y221 180 aaKnown RBP eCLIP9.88□□□□□ -0.83
CSMD1-212ENST00000523387 A0A1W2PRG0 241 aa9.87□□□□□ -0.83
CSMD1-212ENST00000523387 SPDYE3A6NKU9 549 aa9.87□□□□□ -0.83
CSMD1-212ENST00000523387 SART1O43290 800 aaKnown RBP9.87□□□□□ -0.83
CSMD1-212ENST00000523387 TRIM37O94972 964 aa9.87□□□□□ -0.83
CSMD1-212ENST00000523387 SATB1Q01826 763 aa9.87□□□□□ -0.83
CSMD1-212ENST00000523387 CALCOCO2Q13137 446 aa9.87□□□□□ -0.83
CSMD1-212ENST00000523387 AEBP2Q6ZN18 517 aaPredicted RBP9.87□□□□□ -0.83
CSMD1-212ENST00000523387 REXO1Q8N1G1 1221 aaKnown RBP9.87□□□□□ -0.83
CSMD1-212ENST00000523387 ZNF507Q8TCN5 953 aa9.87□□□□□ -0.83
CSMD1-212ENST00000523387 GOLPH3Q9H4A6 298 aa9.87□□□□□ -0.83
CSMD1-212ENST00000523387 EIF4E1BA6NMX2 242 aaKnown RBP9.87□□□□□ -0.83
CSMD1-212ENST00000523387 HIP1RO75146 1068 aa9.87□□□□□ -0.83
CSMD1-212ENST00000523387 PRPHP41219 470 aa9.87□□□□□ -0.83
CSMD1-212ENST00000523387 CRYMQ14894 314 aa9.87□□□□□ -0.83
CSMD1-212ENST00000523387 LRIG3Q6UXM1 1119 aa9.87□□□□□ -0.83
CSMD1-212ENST00000523387 LMNTD2Q8IXW0 634 aa9.87□□□□□ -0.83
CSMD1-212ENST00000523387 FUKQ8N0W3 1084 aa9.87□□□□□ -0.83
CSMD1-212ENST00000523387 MDM1Q8TC05 714 aa9.87□□□□□ -0.83
CSMD1-212ENST00000523387 TMBIM4Q9HC24 238 aa9.87□□□□□ -0.83
CSMD1-212ENST00000523387 SKAP2O75563 359 aaPredicted RBP9.87□□□□□ -0.83
CSMD1-212ENST00000523387 CSF1RP07333 972 aa9.87□□□□□ -0.83
CSMD1-212ENST00000523387 LRRC63Q05C16 580 aa9.87□□□□□ -0.83
CSMD1-212ENST00000523387 IKQ13123 557 aaPredicted RBP9.87□□□□□ -0.83
CSMD1-212ENST00000523387 BIRC2Q13490 618 aa9.87□□□□□ -0.83
CSMD1-212ENST00000523387 SETDB1Q15047 1291 aa9.87□□□□□ -0.83
CSMD1-212ENST00000523387 YTHDF3Q7Z739 585 aaKnown RBP9.87□□□□□ -0.83
CSMD1-212ENST00000523387 NEK9Q8TD19 979 aa9.87□□□□□ -0.83
CSMD1-212ENST00000523387 MIEF2Q96C03 454 aa9.87□□□□□ -0.83
CSMD1-212ENST00000523387 CCSER1Q9C0I3 900 aa9.87□□□□□ -0.83
CSMD1-212ENST00000523387 NOD2Q9HC29 1040 aa9.87□□□□□ -0.83
CSMD1-212ENST00000523387 HOMER3Q9NSC5 361 aa9.87□□□□□ -0.83
CSMD1-212ENST00000523387 CEP72Q9P209 647 aa9.87□□□□□ -0.83
CSMD1-212ENST00000523387 GGT7Q9UJ14 662 aa9.87□□□□□ -0.83
CSMD1-212ENST00000523387 ASAP1Q9ULH1 1129 aa9.87□□□□□ -0.83
CSMD1-212ENST00000523387 DAAM1Q9Y4D1 1078 aa9.87□□□□□ -0.83
CSMD1-212ENST00000523387 RGPD1P0DJD0 1748 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 99.4 ms