RNA–Protein interactions for RNA: ENST00000522802.5

VPS13B-211, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-211ENST00000522802 RFX7Q2KHR2 1363 aa7.97□□□□□ -1.13
VPS13B-211ENST00000522802 TMEM238LA0A1B0GVL6 79 aa7.97□□□□□ -1.13
VPS13B-211ENST00000522802 CXCL11O14625 94 aa7.97□□□□□ -1.13
VPS13B-211ENST00000522802 DEAF1O75398 565 aaPredicted RBP7.97□□□□□ -1.13
VPS13B-211ENST00000522802 ITPKAP23677 461 aa7.97□□□□□ -1.13
VPS13B-211ENST00000522802 GNA15P30679 374 aa7.97□□□□□ -1.13
VPS13B-211ENST00000522802 TAF7LQ5H9L4 462 aa7.97□□□□□ -1.13
VPS13B-211ENST00000522802 MAP3K21Q5TCX8 1036 aa7.97□□□□□ -1.13
VPS13B-211ENST00000522802 SCYL3Q8IZE3 742 aa7.97□□□□□ -1.13
VPS13B-211ENST00000522802 LINS1Q8NG48 757 aa7.97□□□□□ -1.13
VPS13B-211ENST00000522802 ASAP3Q8TDY4 903 aa7.97□□□□□ -1.13
VPS13B-211ENST00000522802 FAM151AQ8WW52 585 aa7.97□□□□□ -1.13
VPS13B-211ENST00000522802 STK31Q9BXU1 1019 aa7.97□□□□□ -1.13
VPS13B-211ENST00000522802 KRTAP4-8Q9BYQ9 185 aa7.97□□□□□ -1.13
VPS13B-211ENST00000522802 PPP4R2Q9NY27 417 aa7.97□□□□□ -1.13
VPS13B-211ENST00000522802 SLC45A1Q9Y2W3 748 aa7.97□□□□□ -1.13
VPS13B-211ENST00000522802 ZHX2Q9Y6X8 837 aa7.97□□□□□ -1.13
VPS13B-211ENST00000522802 TMEM265A0A087WTH1 108 aa7.96□□□□□ -1.14
VPS13B-211ENST00000522802 TRIM75PA6NK02 468 aa7.96□□□□□ -1.14
VPS13B-211ENST00000522802 LINC01387J3KSC0 135 aa7.96□□□□□ -1.14
VPS13B-211ENST00000522802 K7ELQ4 463 aaPredicted RBP7.96□□□□□ -1.14
VPS13B-211ENST00000522802 TM4SF5O14894 197 aa7.96□□□□□ -1.14
VPS13B-211ENST00000522802 FOSL2P15408 326 aa7.96□□□□□ -1.14
VPS13B-211ENST00000522802 UBE4AQ14139 1066 aa7.96□□□□□ -1.14
VPS13B-211ENST00000522802 SETDB1Q15047 1291 aa7.96□□□□□ -1.14
VPS13B-211ENST00000522802 WDR43Q15061 677 aaKnown RBP eCLIP7.96□□□□□ -1.14
VPS13B-211ENST00000522802 FAM110CQ1W6H9 321 aa7.96□□□□□ -1.14
VPS13B-211ENST00000522802 CCDC57Q2TAC2 916 aa7.96□□□□□ -1.14
VPS13B-211ENST00000522802 CDC42EP5Q6NZY7 148 aa7.96□□□□□ -1.14
VPS13B-211ENST00000522802 FASTKD5Q7L8L6 764 aaKnown RBP7.96□□□□□ -1.14
VPS13B-211ENST00000522802 FBXO11Q86XK2 927 aa7.96□□□□□ -1.14
VPS13B-211ENST00000522802 ZFPM1Q8IX07 1006 aa7.96□□□□□ -1.14
VPS13B-211ENST00000522802 TBC1D22AQ8WUA7 517 aa7.96□□□□□ -1.14
VPS13B-211ENST00000522802 DNAAF4Q8WXU2 420 aa7.96□□□□□ -1.14
VPS13B-211ENST00000522802 SRCIN1Q9C0H9 1055 aa7.96□□□□□ -1.14
VPS13B-211ENST00000522802 SEMA6BQ9H3T3 888 aa7.96□□□□□ -1.14
VPS13B-211ENST00000522802 SRA1Q9HD15 236 aaKnown RBP7.96□□□□□ -1.14
VPS13B-211ENST00000522802 PARP2Q9UGN5 583 aa7.96□□□□□ -1.14
VPS13B-211ENST00000522802 GJD2Q9UKL4 321 aa7.96□□□□□ -1.14
VPS13B-211ENST00000522802 AGTPBP1Q9UPW5 1226 aa7.96□□□□□ -1.14
VPS13B-211ENST00000522802 DAGLAQ9Y4D2 1042 aa7.96□□□□□ -1.14
VPS13B-211ENST00000522802 AFG3L2Q9Y4W6 797 aa7.96□□□□□ -1.14
VPS13B-211ENST00000522802 CACNA1FO60840 1977 aa7.96□□□□□ -1.14
VPS13B-211ENST00000522802 MAST3O60307 1309 aa7.96□□□□□ -1.14
VPS13B-211ENST00000522802 RLFQ13129 1914 aa7.95□□□□□ -1.14
VPS13B-211ENST00000522802 CHD7Q9P2D1 2997 aa7.95□□□□□ -1.14
VPS13B-211ENST00000522802 PEX10O60683 326 aa7.95□□□□□ -1.14
VPS13B-211ENST00000522802 CCND3P30281 292 aaPredicted RBP7.95□□□□□ -1.14
VPS13B-211ENST00000522802 DAB2P98082 770 aa7.95□□□□□ -1.14
VPS13B-211ENST00000522802 C9orf50Q5SZB4 431 aa7.95□□□□□ -1.14
VPS13B-211ENST00000522802 HHIPL2Q6UWX4 724 aa7.95□□□□□ -1.14
VPS13B-211ENST00000522802 ALYREFQ86V81 257 aaKnown RBP7.95□□□□□ -1.14
VPS13B-211ENST00000522802 VPS37DQ86XT2 251 aa7.95□□□□□ -1.14
VPS13B-211ENST00000522802 MAP4K3Q8IVH8 894 aa7.95□□□□□ -1.14
VPS13B-211ENST00000522802 FMR1NBQ8N0W7 255 aaPredicted RBP7.95□□□□□ -1.14
VPS13B-211ENST00000522802 PICK1Q9NRD5 415 aa7.95□□□□□ -1.14
VPS13B-211ENST00000522802 AK5Q9Y6K8 562 aa7.95□□□□□ -1.14
VPS13B-211ENST00000522802 NCOR1O75376 2440 aa7.95□□□□□ -1.14
VPS13B-211ENST00000522802 MYH2Q9UKX2 1941 aa7.95□□□□□ -1.14
VPS13B-211ENST00000522802 RBM47A0AV96 593 aaKnown RBP7.94□□□□□ -1.14
VPS13B-211ENST00000522802 F6X3S4 739 aa7.94□□□□□ -1.14
VPS13B-211ENST00000522802 H3BRJ5 948 aa7.94□□□□□ -1.14
VPS13B-211ENST00000522802 APAF1O14727 1248 aa7.94□□□□□ -1.14
VPS13B-211ENST00000522802 FRAT2O75474 233 aaPredicted RBP7.94□□□□□ -1.14
VPS13B-211ENST00000522802 CDC25BP30305 580 aa7.94□□□□□ -1.14
VPS13B-211ENST00000522802 RAC1P63000 192 aa7.94□□□□□ -1.14
VPS13B-211ENST00000522802 SHHQ15465 462 aa7.94□□□□□ -1.14
VPS13B-211ENST00000522802 VGLL2Q8N8G2 317 aa7.94□□□□□ -1.14
VPS13B-211ENST00000522802 FAM122AQ96E09 287 aa7.94□□□□□ -1.14
VPS13B-211ENST00000522802 LBHD1Q9BQE6 289 aaPredicted RBP7.94□□□□□ -1.14
VPS13B-211ENST00000522802 CLEC4MQ9H2X3 399 aaPredicted RBP7.94□□□□□ -1.14
VPS13B-211ENST00000522802 C12orf49Q9H741 205 aa7.94□□□□□ -1.14
VPS13B-211ENST00000522802 MYBBP1AQ9BQG0 1328 aaKnown RBP7.94□□□□□ -1.14
VPS13B-211ENST00000522802 SIPA1L1O43166 1804 aa7.94□□□□□ -1.14
VPS13B-211ENST00000522802 KRBA1A5PL33 1030 aa7.93□□□□□ -1.14
VPS13B-211ENST00000522802 FAM229AH3BQW9 127 aa7.93□□□□□ -1.14
VPS13B-211ENST00000522802 FSCN2O14926 492 aa7.93□□□□□ -1.14
VPS13B-211ENST00000522802 SPATA31C1P0DKV0 1188 aa7.93□□□□□ -1.14
VPS13B-211ENST00000522802 ESRRAP11474 423 aaPredicted RBP7.93□□□□□ -1.14
VPS13B-211ENST00000522802 XRCC5P13010 732 aaKnown RBP7.93□□□□□ -1.14
VPS13B-211ENST00000522802 ZNF16P17020 682 aaPredicted RBP7.93□□□□□ -1.14
VPS13B-211ENST00000522802 CYP2B6P20813 491 aa7.93□□□□□ -1.14
VPS13B-211ENST00000522802 PRDX5P30044 214 aa7.93□□□□□ -1.14
VPS13B-211ENST00000522802 CALD1Q05682 793 aaKnown RBP7.93□□□□□ -1.14
VPS13B-211ENST00000522802 CACNB2Q08289 660 aaPredicted RBP7.93□□□□□ -1.14
VPS13B-211ENST00000522802 CCL14Q16627 93 aa7.93□□□□□ -1.14
VPS13B-211ENST00000522802 ZNF423Q2M1K9 1284 aa7.93□□□□□ -1.14
VPS13B-211ENST00000522802 TWISTNBQ3B726 338 aaPredicted RBP7.93□□□□□ -1.14
VPS13B-211ENST00000522802 LRRC24Q50LG9 513 aa7.93□□□□□ -1.14
VPS13B-211ENST00000522802 PRRT3Q5FWE3 981 aa7.93□□□□□ -1.14
VPS13B-211ENST00000522802 RPS26P11Q5JNZ5 115 aaPredicted RBP7.93□□□□□ -1.14
VPS13B-211ENST00000522802 BEND3Q5T5X7 828 aa7.93□□□□□ -1.14
VPS13B-211ENST00000522802 TXNDC11Q6PKC3 985 aa7.93□□□□□ -1.14
VPS13B-211ENST00000522802 GALNT11Q8NCW6 608 aa7.93□□□□□ -1.14
VPS13B-211ENST00000522802 C3orf58Q8NDZ4 430 aa7.93□□□□□ -1.14
VPS13B-211ENST00000522802 GIPC2Q8TF65 315 aa7.93□□□□□ -1.14
VPS13B-211ENST00000522802 WNT8BQ93098 351 aa7.93□□□□□ -1.14
VPS13B-211ENST00000522802 MRIQ9BWK5 157 aa7.93□□□□□ -1.14
VPS13B-211ENST00000522802 ZNF576Q9H609 170 aa7.93□□□□□ -1.14
VPS13B-211ENST00000522802 ZFYVE1Q9HBF4 777 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms