RNA–Protein interactions for RNA: ENST00000521932.1

VPS13B-210, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 1,055 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-210ENST00000521932 STK3Q13188 491 aa9.66□□□□□ -0.86
VPS13B-210ENST00000521932 CDC37Q16543 378 aaPredicted RBP9.66□□□□□ -0.86
VPS13B-210ENST00000521932 NPAS3Q8IXF0 933 aa9.66□□□□□ -0.86
VPS13B-210ENST00000521932 CMTR1Q8N1G2 835 aaKnown RBP9.66□□□□□ -0.86
VPS13B-210ENST00000521932 SHCBP1Q8NEM2 672 aa9.66□□□□□ -0.86
VPS13B-210ENST00000521932 CCDC97Q96F63 343 aaPredicted RBP9.66□□□□□ -0.86
VPS13B-210ENST00000521932 PAGR1Q9BTK6 254 aa9.66□□□□□ -0.86
VPS13B-210ENST00000521932 MOV10L1Q9BXT6 1211 aaKnown RBP9.66□□□□□ -0.86
VPS13B-210ENST00000521932 TEX13BQ9BXU2 312 aa9.66□□□□□ -0.86
VPS13B-210ENST00000521932 RAVER2Q9HCJ3 691 aaKnown RBP9.66□□□□□ -0.86
VPS13B-210ENST00000521932 VAT1LQ9HCJ6 419 aa9.66□□□□□ -0.86
VPS13B-210ENST00000521932 SH2B1Q9NRF2 756 aaPredicted RBP9.66□□□□□ -0.86
VPS13B-210ENST00000521932 NAP1L2Q9ULW6 460 aaPredicted RBP9.66□□□□□ -0.86
VPS13B-210ENST00000521932 PRPF3O43395 683 aaKnown RBP9.65□□□□□ -0.86
VPS13B-210ENST00000521932 FKTNO75072 461 aa9.65□□□□□ -0.86
VPS13B-210ENST00000521932 LARGE1O95461 756 aa9.65□□□□□ -0.86
VPS13B-210ENST00000521932 MAPK4P31152 587 aa9.65□□□□□ -0.86
VPS13B-210ENST00000521932 COPB2P35606 906 aa9.65□□□□□ -0.86
VPS13B-210ENST00000521932 SNAP25P60880 206 aa9.65□□□□□ -0.86
VPS13B-210ENST00000521932 QRICH1Q2TAL8 776 aa9.65□□□□□ -0.86
VPS13B-210ENST00000521932 TKFCQ3LXA3 575 aa9.65□□□□□ -0.86
VPS13B-210ENST00000521932 CPXCR1Q8N123 301 aa9.65□□□□□ -0.86
VPS13B-210ENST00000521932 ZNF296Q8WUU4 475 aaPredicted RBP9.65□□□□□ -0.86
VPS13B-210ENST00000521932 GTF3C6Q969F1 213 aa9.65□□□□□ -0.86
VPS13B-210ENST00000521932 SNX21Q969T3 373 aa9.65□□□□□ -0.86
VPS13B-210ENST00000521932 RRP36Q96EU6 259 aaKnown RBP9.65□□□□□ -0.86
VPS13B-210ENST00000521932 PIGSQ96S52 555 aa9.65□□□□□ -0.86
VPS13B-210ENST00000521932 RNF26Q9BY78 433 aaPredicted RBP9.65□□□□□ -0.86
VPS13B-210ENST00000521932 MAF1Q9H063 256 aa9.65□□□□□ -0.86
VPS13B-210ENST00000521932 PORCNQ9H237 461 aa9.65□□□□□ -0.86
VPS13B-210ENST00000521932 MROH8Q9H579 483 aa9.65□□□□□ -0.86
VPS13B-210ENST00000521932 NCOA5Q9HCD5 579 aaKnown RBP9.65□□□□□ -0.86
VPS13B-210ENST00000521932 RIPK3Q9Y572 518 aa9.65□□□□□ -0.86
VPS13B-210ENST00000521932 CTDP1Q9Y5B0 961 aaPredicted RBP9.65□□□□□ -0.86
VPS13B-210ENST00000521932 CNTNAP5Q8WYK1 1306 aa9.64□□□□□ -0.87
VPS13B-210ENST00000521932 CPLX1O14810 134 aa9.64□□□□□ -0.87
VPS13B-210ENST00000521932 STRNO43815 780 aa9.64□□□□□ -0.87
VPS13B-210ENST00000521932 PPP1R11O60927 126 aaPredicted RBP9.64□□□□□ -0.87
VPS13B-210ENST00000521932 CTDNEP1O95476 244 aa9.64□□□□□ -0.87
VPS13B-210ENST00000521932 GNRH1P01148 92 aa9.64□□□□□ -0.87
VPS13B-210ENST00000521932 HSPA8P11142 646 aaKnown RBP9.64□□□□□ -0.87
VPS13B-210ENST00000521932 ERCC3P19447 782 aa9.64□□□□□ -0.87
VPS13B-210ENST00000521932 CTGFP29279 349 aa9.64□□□□□ -0.87
VPS13B-210ENST00000521932 GMPRP36959 345 aa9.64□□□□□ -0.87
VPS13B-210ENST00000521932 CTCFP49711 727 aaPredicted RBP9.64□□□□□ -0.87
VPS13B-210ENST00000521932 RELBQ01201 579 aa9.64□□□□□ -0.87
VPS13B-210ENST00000521932 TRAF1Q13077 416 aa9.64□□□□□ -0.87
VPS13B-210ENST00000521932 NR1H3Q13133 447 aa9.64□□□□□ -0.87
VPS13B-210ENST00000521932 PLS1Q14651 629 aa9.64□□□□□ -0.87
VPS13B-210ENST00000521932 SNRNP48Q6IEG0 339 aaKnown RBP9.64□□□□□ -0.87
VPS13B-210ENST00000521932 CCDC174Q6PII3 467 aa9.64□□□□□ -0.87
VPS13B-210ENST00000521932 CPLX2Q6PUV4 134 aaKnown RBP9.64□□□□□ -0.87
VPS13B-210ENST00000521932 FBXO11Q86XK2 927 aa9.64□□□□□ -0.87
VPS13B-210ENST00000521932 ABRAQ8N0Z2 381 aa9.64□□□□□ -0.87
VPS13B-210ENST00000521932 NECAB1Q8N987 351 aa9.64□□□□□ -0.87
VPS13B-210ENST00000521932 RGS22Q8NE09 1264 aa9.64□□□□□ -0.87
VPS13B-210ENST00000521932 CHST13Q8NET6 341 aa9.64□□□□□ -0.87
VPS13B-210ENST00000521932 TMX3Q96JJ7 454 aa9.64□□□□□ -0.87
VPS13B-210ENST00000521932 AMNQ9BXJ7 453 aa9.64□□□□□ -0.87
VPS13B-210ENST00000521932 EFCC1Q9HA90 598 aa9.64□□□□□ -0.87
VPS13B-210ENST00000521932 TTLL8A6PVC2 850 aa9.63□□□□□ -0.87
VPS13B-210ENST00000521932 hCG_1984214I3L0E3 225 aa9.63□□□□□ -0.87
VPS13B-210ENST00000521932 CDKL5O76039 1030 aa9.63□□□□□ -0.87
VPS13B-210ENST00000521932 ABL2P42684 1182 aa9.63□□□□□ -0.87
VPS13B-210ENST00000521932 CTSOP43234 321 aaPredicted RBP9.63□□□□□ -0.87
VPS13B-210ENST00000521932 PSMC4P43686 418 aa9.63□□□□□ -0.87
VPS13B-210ENST00000521932 CAP1Q01518 475 aa9.63□□□□□ -0.87
VPS13B-210ENST00000521932 ST3GAL1Q11201 340 aa9.63□□□□□ -0.87
VPS13B-210ENST00000521932 KIF22Q14807 665 aa9.63□□□□□ -0.87
VPS13B-210ENST00000521932 ARHGEF6Q15052 776 aa9.63□□□□□ -0.87
VPS13B-210ENST00000521932 PKN1Q16512 942 aa9.63□□□□□ -0.87
VPS13B-210ENST00000521932 PFKFB3Q16875 520 aaPredicted RBP9.63□□□□□ -0.87
VPS13B-210ENST00000521932 NOL8Q76FK4 1167 aaKnown RBP9.63□□□□□ -0.87
VPS13B-210ENST00000521932 GPR142Q7Z601 462 aa9.63□□□□□ -0.87
VPS13B-210ENST00000521932 HOMER1Q86YM7 354 aa9.63□□□□□ -0.87
VPS13B-210ENST00000521932 SAMD3Q8N6K7 520 aa9.63□□□□□ -0.87
VPS13B-210ENST00000521932 ZNF713Q8N859 430 aaPredicted RBP9.63□□□□□ -0.87
VPS13B-210ENST00000521932 PHKBQ93100 1093 aa9.63□□□□□ -0.87
VPS13B-210ENST00000521932 ERO1AQ96HE7 468 aa9.63□□□□□ -0.87
VPS13B-210ENST00000521932 TRERF1Q96PN7 1200 aa9.63□□□□□ -0.87
VPS13B-210ENST00000521932 LLPHQ9BRT6 129 aaKnown RBP9.63□□□□□ -0.87
VPS13B-210ENST00000521932 ZNF395Q9H8N7 513 aaPredicted RBP9.63□□□□□ -0.87
VPS13B-210ENST00000521932 SEC63Q9UGP8 760 aaKnown RBP9.63□□□□□ -0.87
VPS13B-210ENST00000521932 FBXO40Q9UH90 709 aa9.63□□□□□ -0.87
VPS13B-210ENST00000521932 CCPG1Q9ULG6 757 aa9.63□□□□□ -0.87
VPS13B-210ENST00000521932 PCDHA1Q9Y5I3 950 aa9.63□□□□□ -0.87
VPS13B-210ENST00000521932 COL11A1P12107 1806 aaPredicted RBP9.63□□□□□ -0.87
VPS13B-210ENST00000521932 ABCB11O95342 1321 aa9.62□□□□□ -0.87
VPS13B-210ENST00000521932 FIGNL2A6NMB9 653 aa9.62□□□□□ -0.87
VPS13B-210ENST00000521932 ALAS1P13196 640 aa9.62□□□□□ -0.87
VPS13B-210ENST00000521932 LBX1P52954 281 aa9.62□□□□□ -0.87
VPS13B-210ENST00000521932 FCGRTP55899 365 aa9.62□□□□□ -0.87
VPS13B-210ENST00000521932 GHRHRQ02643 423 aa9.62□□□□□ -0.87
VPS13B-210ENST00000521932 SSRP1Q08945 709 aaKnown RBP9.62□□□□□ -0.87
VPS13B-210ENST00000521932 CUL4AQ13619 759 aa9.62□□□□□ -0.87
VPS13B-210ENST00000521932 GRB14Q14449 540 aa9.62□□□□□ -0.87
VPS13B-210ENST00000521932 MUM1L1Q5H9M0 696 aa9.62□□□□□ -0.87
VPS13B-210ENST00000521932 PLEKHH3Q7Z736 793 aa9.62□□□□□ -0.87
VPS13B-210ENST00000521932 NCAPG2Q86XI2 1143 aa9.62□□□□□ -0.87
VPS13B-210ENST00000521932 CCAR1Q8IX12 1150 aaKnown RBP9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms