RNA–Protein interactions for RNA: ENST00000520580.5

SREK1-208, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 2

Gene SREK1, Length 2,369 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-208ENST00000520580 CAMKK1Q8N5S9 505 aa4.51□□□□□ -1.69
SREK1-208ENST00000520580 GOLGA6L1Q8N7Z2 621 aa4.51□□□□□ -1.69
SREK1-208ENST00000520580 PUM2Q8TB72 1066 aaKnown RBP eCLIP4.51□□□□□ -1.69
SREK1-208ENST00000520580 JADE3Q92613 823 aa4.51□□□□□ -1.69
SREK1-208ENST00000520580 TRIM47Q96LD4 638 aa4.51□□□□□ -1.69
SREK1-208ENST00000520580 RNF208Q9H0X6 261 aa4.51□□□□□ -1.69
SREK1-208ENST00000520580 MBIPQ9NS73 344 aa4.51□□□□□ -1.69
SREK1-208ENST00000520580 PCDHGB3Q9Y5G1 929 aa4.51□□□□□ -1.69
SREK1-208ENST00000520580 ST14Q9Y5Y6 855 aa4.51□□□□□ -1.69
SREK1-208ENST00000520580 DYNC1LI2O43237 492 aaPredicted RBP4.51□□□□□ -1.69
SREK1-208ENST00000520580 SIGLEC6O43699 453 aa4.51□□□□□ -1.69
SREK1-208ENST00000520580 OFD1O75665 1012 aa4.51□□□□□ -1.69
SREK1-208ENST00000520580 GRK2P25098 689 aa4.51□□□□□ -1.69
SREK1-208ENST00000520580 PTX3P26022 381 aaPredicted RBP4.51□□□□□ -1.69
SREK1-208ENST00000520580 MAP2K3P46734 347 aa4.51□□□□□ -1.69
SREK1-208ENST00000520580 TERF2Q15554 542 aa4.51□□□□□ -1.69
SREK1-208ENST00000520580 INF2Q27J81 1249 aa4.51□□□□□ -1.69
SREK1-208ENST00000520580 TUBB8Q3ZCM7 444 aa4.51□□□□□ -1.69
SREK1-208ENST00000520580 MBLAC2Q68D91 279 aa4.51□□□□□ -1.69
SREK1-208ENST00000520580 SLCO4C1Q6ZQN7 724 aa4.51□□□□□ -1.69
SREK1-208ENST00000520580 KIAA1211Q6ZU35 1233 aa4.51□□□□□ -1.69
SREK1-208ENST00000520580 SMAP1Q8IYB5 467 aaPredicted RBP4.51□□□□□ -1.69
SREK1-208ENST00000520580 PPM1NQ8N819 430 aa4.51□□□□□ -1.69
SREK1-208ENST00000520580 GALNT6Q8NCL4 622 aa4.51□□□□□ -1.69
SREK1-208ENST00000520580 LMBR1Q8WVP7 490 aa4.51□□□□□ -1.69
SREK1-208ENST00000520580 NUP88Q99567 741 aaPredicted RBP4.51□□□□□ -1.69
SREK1-208ENST00000520580 ELF4Q99607 663 aaPredicted RBP4.51□□□□□ -1.69
SREK1-208ENST00000520580 ZFYVE21Q9BQ24 234 aa4.51□□□□□ -1.69
SREK1-208ENST00000520580 GTPBP4Q9BZE4 634 aaKnown RBP4.51□□□□□ -1.69
SREK1-208ENST00000520580 RNF38Q9H0F5 515 aa4.51□□□□□ -1.69
SREK1-208ENST00000520580 TOMM22Q9NS69 142 aa4.51□□□□□ -1.69
SREK1-208ENST00000520580 C1orf112Q9NSG2 853 aa4.51□□□□□ -1.69
SREK1-208ENST00000520580 FBXL7Q9UJT9 491 aa4.51□□□□□ -1.69
SREK1-208ENST00000520580 PCOLCE2Q9UKZ9 415 aa4.51□□□□□ -1.69
SREK1-208ENST00000520580 PPP2R3BQ9Y5P8 575 aa4.51□□□□□ -1.69
SREK1-208ENST00000520580 AURKAO14965 403 aa4.5□□□□□ -1.69
SREK1-208ENST00000520580 KDM1AO60341 852 aa4.5□□□□□ -1.69
SREK1-208ENST00000520580 SETSIPP0DME0 302 aa4.5□□□□□ -1.69
SREK1-208ENST00000520580 SLC5A1P13866 664 aa4.5□□□□□ -1.69
SREK1-208ENST00000520580 ETV3P41162 512 aa4.5□□□□□ -1.69
SREK1-208ENST00000520580 AK2P54819 239 aa4.5□□□□□ -1.69
SREK1-208ENST00000520580 NMIQ13287 307 aaPredicted RBP4.5□□□□□ -1.69
SREK1-208ENST00000520580 KIZQ2M2Z5 673 aa4.5□□□□□ -1.69
SREK1-208ENST00000520580 FDX2Q6P4F2 183 aa4.5□□□□□ -1.69
SREK1-208ENST00000520580 OSTM1Q86WC4 334 aa4.5□□□□□ -1.69
SREK1-208ENST00000520580 GPR161Q8N6U8 529 aaKnown RBP4.5□□□□□ -1.69
SREK1-208ENST00000520580 EFHBQ8N7U6 833 aa4.5□□□□□ -1.69
SREK1-208ENST00000520580 PPP1R35Q8TAP8 253 aa4.5□□□□□ -1.69
SREK1-208ENST00000520580 FBXW5Q969U6 566 aa4.5□□□□□ -1.69
SREK1-208ENST00000520580 MYD88Q99836 296 aa4.5□□□□□ -1.69
SREK1-208ENST00000520580 NGRNQ9NPE2 291 aaKnown RBP4.5□□□□□ -1.69
SREK1-208ENST00000520580 DNAJC28Q9NX36 388 aa4.5□□□□□ -1.69
SREK1-208ENST00000520580 BTG4Q9NY30 223 aa4.5□□□□□ -1.69
SREK1-208ENST00000520580 RNF112Q9ULX5 631 aa4.5□□□□□ -1.69
SREK1-208ENST00000520580 H7C1D1 291 aa4.5□□□□□ -1.69
SREK1-208ENST00000520580 CBX7O95931 251 aa4.5□□□□□ -1.69
SREK1-208ENST00000520580 NID1P14543 1247 aa4.5□□□□□ -1.69
SREK1-208ENST00000520580 AMPD1P23109 780 aa4.5□□□□□ -1.69
SREK1-208ENST00000520580 GRK3P35626 688 aa4.5□□□□□ -1.69
SREK1-208ENST00000520580 RENBPP51606 427 aa4.5□□□□□ -1.69
SREK1-208ENST00000520580 CDK5R2Q13319 367 aa4.5□□□□□ -1.69
SREK1-208ENST00000520580 RGL3Q3MIN7 710 aa4.5□□□□□ -1.69
SREK1-208ENST00000520580 TRAPPC3LQ5T215 181 aa4.5□□□□□ -1.69
SREK1-208ENST00000520580 RSPO2Q6UXX9 243 aaPredicted RBP4.5□□□□□ -1.69
SREK1-208ENST00000520580 CPNE8Q86YQ8 564 aa4.5□□□□□ -1.69
SREK1-208ENST00000520580 MAP4K3Q8IVH8 894 aa4.5□□□□□ -1.69
SREK1-208ENST00000520580 FAM9BQ8IZU0 186 aa4.5□□□□□ -1.69
SREK1-208ENST00000520580 MIER2Q8N344 545 aa4.5□□□□□ -1.69
SREK1-208ENST00000520580 C2CD4AQ8NCU7 369 aaPredicted RBP4.5□□□□□ -1.69
SREK1-208ENST00000520580 NANOS1Q8WY41 292 aaKnown RBP4.5□□□□□ -1.69
SREK1-208ENST00000520580 JAM3Q9BX67 310 aa4.5□□□□□ -1.69
SREK1-208ENST00000520580 ZHX3Q9H4I2 956 aa4.5□□□□□ -1.69
SREK1-208ENST00000520580 SENP2Q9HC62 589 aa4.5□□□□□ -1.69
SREK1-208ENST00000520580 GTF2IRD1Q9UHL9 959 aa4.5□□□□□ -1.69
SREK1-208ENST00000520580 EDARQ9UNE0 448 aa4.5□□□□□ -1.69
SREK1-208ENST00000520580 ABHD14A-ACY1A0A1B0GW23 586 aa4.49□□□□□ -1.69
SREK1-208ENST00000520580 PQBP1O60828 265 aaKnown RBP4.49□□□□□ -1.69
SREK1-208ENST00000520580 JAM2P57087 298 aa4.49□□□□□ -1.69
SREK1-208ENST00000520580 GJA9P57773 515 aa4.49□□□□□ -1.69
SREK1-208ENST00000520580 IRF9Q00978 393 aa4.49□□□□□ -1.69
SREK1-208ENST00000520580 SRSF2Q01130 221 aaKnown RBP4.49□□□□□ -1.69
SREK1-208ENST00000520580 KIAA0753Q2KHM9 967 aa4.49□□□□□ -1.69
SREK1-208ENST00000520580 RNFT1Q5M7Z0 435 aa4.49□□□□□ -1.69
SREK1-208ENST00000520580 CPZQ66K79 652 aa4.49□□□□□ -1.69
SREK1-208ENST00000520580 TTLL7Q6ZT98 887 aa4.49□□□□□ -1.69
SREK1-208ENST00000520580 CHST15Q7LFX5 561 aaPredicted RBP4.49□□□□□ -1.69
SREK1-208ENST00000520580 RASSF3Q86WH2 238 aa4.49□□□□□ -1.69
SREK1-208ENST00000520580 ZNF354CQ86Y25 554 aa4.49□□□□□ -1.69
SREK1-208ENST00000520580 TMTC2Q8N394 836 aa4.49□□□□□ -1.69
SREK1-208ENST00000520580 KIAA1958Q8N8K9 716 aa4.49□□□□□ -1.69
SREK1-208ENST00000520580 DIS3LQ8TF46 1054 aaKnown RBP4.49□□□□□ -1.69
SREK1-208ENST00000520580 TMEM169Q96HH4 297 aa4.49□□□□□ -1.69
SREK1-208ENST00000520580 TBCBQ99426 244 aa4.49□□□□□ -1.69
SREK1-208ENST00000520580 SENP7Q9BQF6 1050 aa4.49□□□□□ -1.69
SREK1-208ENST00000520580 HERPUD2Q9BSE4 406 aa4.49□□□□□ -1.69
SREK1-208ENST00000520580 SUGCTQ9HAC7 445 aa4.49□□□□□ -1.69
SREK1-208ENST00000520580 C9orf78Q9NZ63 289 aaPredicted RBP4.49□□□□□ -1.69
SREK1-208ENST00000520580 SERPINB13Q9UIV8 391 aa4.49□□□□□ -1.69
SREK1-208ENST00000520580 PTPN22Q9Y2R2 807 aa4.49□□□□□ -1.69
SREK1-208ENST00000520580 RPS6KL1Q9Y6S9 549 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms