RNA–Protein interactions for RNA: ENST00000519401.5

SPIDR-211, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 2,090 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-211ENST00000519401 PTPRN2Q92932 1015 aa12.49□□□□□ -0.41
SPIDR-211ENST00000519401 PPP2R3CQ969Q6 453 aa12.49□□□□□ -0.41
SPIDR-211ENST00000519401 NUP88Q99567 741 aaPredicted RBP12.49□□□□□ -0.41
SPIDR-211ENST00000519401 CCDC134Q9H6E4 229 aa12.49□□□□□ -0.41
SPIDR-211ENST00000519401 PREBQ9HCU5 417 aa12.49□□□□□ -0.41
SPIDR-211ENST00000519401 UTP6Q9NYH9 597 aaKnown RBP12.49□□□□□ -0.41
SPIDR-211ENST00000519401 TRIM10Q9UDY6 481 aa12.49□□□□□ -0.41
SPIDR-211ENST00000519401 SCOCQ9UIL1 159 aa12.49□□□□□ -0.41
SPIDR-211ENST00000519401 PLAAQ9Y263 795 aa12.49□□□□□ -0.41
SPIDR-211ENST00000519401 HYOU1Q9Y4L1 999 aa12.49□□□□□ -0.41
SPIDR-211ENST00000519401 BZW2Q9Y6E2 419 aaKnown RBP12.49□□□□□ -0.41
SPIDR-211ENST00000519401 SYNRGQ9UMZ2 1314 aa12.49□□□□□ -0.41
SPIDR-211ENST00000519401 POLR3DP05423 398 aaPredicted RBP12.49□□□□□ -0.41
SPIDR-211ENST00000519401 MSH2P43246 934 aa12.49□□□□□ -0.41
SPIDR-211ENST00000519401 FOSBP53539 338 aa12.49□□□□□ -0.41
SPIDR-211ENST00000519401 MEA1Q16626 185 aa12.49□□□□□ -0.41
SPIDR-211ENST00000519401 USH1GQ495M9 461 aa12.49□□□□□ -0.41
SPIDR-211ENST00000519401 CCDC92Q53HC0 331 aaPredicted RBP12.49□□□□□ -0.41
SPIDR-211ENST00000519401 ZBTB8BQ8NAP8 495 aaPredicted RBP12.49□□□□□ -0.41
SPIDR-211ENST00000519401 LRRC45Q96CN5 670 aa12.49□□□□□ -0.41
SPIDR-211ENST00000519401 ZNF317Q96PQ6 595 aaPredicted RBP12.49□□□□□ -0.41
SPIDR-211ENST00000519401 TMEM98Q9Y2Y6 226 aa12.49□□□□□ -0.41
SPIDR-211ENST00000519401 C5P01031 1676 aa12.48□□□□□ -0.41
SPIDR-211ENST00000519401 MYH7P12883 1935 aa12.48□□□□□ -0.41
SPIDR-211ENST00000519401 H0YGN5 161 aa12.48□□□□□ -0.41
SPIDR-211ENST00000519401 SH2B2O14492 632 aaPredicted RBP12.48□□□□□ -0.41
SPIDR-211ENST00000519401 FAM200BP0CF97 657 aa12.48□□□□□ -0.41
SPIDR-211ENST00000519401 RARAP10276 462 aa12.48□□□□□ -0.41
SPIDR-211ENST00000519401 EIF2S2P20042 333 aaKnown RBP12.48□□□□□ -0.41
SPIDR-211ENST00000519401 MTMR3Q13615 1198 aa12.48□□□□□ -0.41
SPIDR-211ENST00000519401 TRMT44Q8IYL2 757 aaKnown RBP12.48□□□□□ -0.41
SPIDR-211ENST00000519401 PROCA1Q8NCQ7 364 aaPredicted RBP12.48□□□□□ -0.41
SPIDR-211ENST00000519401 LINC00116Q8NCU8 138 aa12.48□□□□□ -0.41
SPIDR-211ENST00000519401 STKLD1Q8NE28 680 aa12.48□□□□□ -0.41
SPIDR-211ENST00000519401 LINS1Q8NG48 757 aa12.48□□□□□ -0.41
SPIDR-211ENST00000519401 XPO6Q96QU8 1125 aaKnown RBP12.48□□□□□ -0.41
SPIDR-211ENST00000519401 FSD1Q9BTV5 496 aa12.48□□□□□ -0.41
SPIDR-211ENST00000519401 NSRP1Q9H0G5 558 aaKnown RBP12.48□□□□□ -0.41
SPIDR-211ENST00000519401 PDP2Q9P2J9 529 aa12.48□□□□□ -0.41
SPIDR-211ENST00000519401 DDX25Q9UHL0 483 aaKnown RBP12.48□□□□□ -0.41
SPIDR-211ENST00000519401 TSKSQ9UJT2 592 aa12.48□□□□□ -0.41
SPIDR-211ENST00000519401 PAIP2BQ9ULR5 123 aaKnown RBP12.48□□□□□ -0.41
SPIDR-211ENST00000519401 NFS1Q9Y697 457 aa12.48□□□□□ -0.41
SPIDR-211ENST00000519401 PNPLA7Q6ZV29 1317 aa12.48□□□□□ -0.41
SPIDR-211ENST00000519401 TACC1O75410 805 aa12.47□□□□□ -0.41
SPIDR-211ENST00000519401 MBD4O95243 580 aa12.47□□□□□ -0.41
SPIDR-211ENST00000519401 CALB2P22676 271 aa12.47□□□□□ -0.41
SPIDR-211ENST00000519401 TUBP50607 506 aa12.47□□□□□ -0.41
SPIDR-211ENST00000519401 EIF4A1P60842 406 aaKnown RBP12.47□□□□□ -0.41
SPIDR-211ENST00000519401 SULT2A1Q06520 285 aa12.47□□□□□ -0.41
SPIDR-211ENST00000519401 TSR1Q2NL82 804 aaKnown RBP12.47□□□□□ -0.41
SPIDR-211ENST00000519401 ZNF365Q70YC5 407 aa12.47□□□□□ -0.41
SPIDR-211ENST00000519401 ZNF589Q86UQ0 364 aaPredicted RBP12.47□□□□□ -0.41
SPIDR-211ENST00000519401 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.47□□□□□ -0.41
SPIDR-211ENST00000519401 SPICE1Q8N0Z3 855 aa12.47□□□□□ -0.41
SPIDR-211ENST00000519401 SDR16C5Q8N3Y7 309 aa12.47□□□□□ -0.41
SPIDR-211ENST00000519401 IRGQQ8WZA9 623 aa12.47□□□□□ -0.41
SPIDR-211ENST00000519401 RAB3IPQ96QF0 476 aaPredicted RBP12.47□□□□□ -0.41
SPIDR-211ENST00000519401 ZCWPW1Q9H0M4 648 aa12.47□□□□□ -0.41
SPIDR-211ENST00000519401 SAMD15Q9P1V8 674 aa12.47□□□□□ -0.41
SPIDR-211ENST00000519401 TUBGCP4Q9UGJ1 667 aa12.47□□□□□ -0.41
SPIDR-211ENST00000519401 RPL26L1Q9UNX3 145 aaKnown RBP12.47□□□□□ -0.41
SPIDR-211ENST00000519401 LRP5O75197 1615 aa12.47□□□□□ -0.41
SPIDR-211ENST00000519401 MAP3K13O43283 966 aa12.47□□□□□ -0.41
SPIDR-211ENST00000519401 PTCD1O75127 700 aaKnown RBP12.47□□□□□ -0.41
SPIDR-211ENST00000519401 ZNF189O75820 626 aaPredicted RBP12.47□□□□□ -0.41
SPIDR-211ENST00000519401 ZBTB7AO95365 584 aa12.47□□□□□ -0.41
SPIDR-211ENST00000519401 CYP21A2P08686 494 aa12.47□□□□□ -0.41
SPIDR-211ENST00000519401 PAX3P23760 479 aa12.47□□□□□ -0.41
SPIDR-211ENST00000519401 KCNJ2P63252 427 aa12.47□□□□□ -0.41
SPIDR-211ENST00000519401 SLC7A5Q01650 507 aa12.47□□□□□ -0.41
SPIDR-211ENST00000519401 SLC39A6Q13433 755 aa12.47□□□□□ -0.41
SPIDR-211ENST00000519401 TTC39AQ5SRH9 613 aa12.47□□□□□ -0.41
SPIDR-211ENST00000519401 ASRGL1Q7L266 308 aa12.47□□□□□ -0.41
SPIDR-211ENST00000519401 ENDOVQ8N8Q3 282 aaKnown RBP12.47□□□□□ -0.41
SPIDR-211ENST00000519401 WDR66Q8TBY9 1149 aa12.47□□□□□ -0.41
SPIDR-211ENST00000519401 FAM136AQ96C01 138 aa12.47□□□□□ -0.41
SPIDR-211ENST00000519401 RPS6KC1Q96S38 1066 aa12.47□□□□□ -0.41
SPIDR-211ENST00000519401 HAPLN3Q96S86 360 aa12.47□□□□□ -0.41
SPIDR-211ENST00000519401 MAP3K14Q99558 947 aa12.47□□□□□ -0.41
SPIDR-211ENST00000519401 MIS12Q9H081 205 aa12.47□□□□□ -0.41
SPIDR-211ENST00000519401 RNPEPL1Q9HAU8 725 aa12.47□□□□□ -0.41
SPIDR-211ENST00000519401 LUC7LQ9NQ29 371 aaKnown RBP12.47□□□□□ -0.41
SPIDR-211ENST00000519401 ZNHIT6Q9NWK9 470 aaKnown RBP12.47□□□□□ -0.41
SPIDR-211ENST00000519401 TFCP2L1Q9NZI6 479 aa12.47□□□□□ -0.41
SPIDR-211ENST00000519401 NFU1Q9UMS0 254 aa12.47□□□□□ -0.41
SPIDR-211ENST00000519401 DAAM1Q9Y4D1 1078 aa12.47□□□□□ -0.41
SPIDR-211ENST00000519401 COMMD3-BMI1R4GMX3 469 aa12.47□□□□□ -0.41
SPIDR-211ENST00000519401 MYH13Q9UKX3 1938 aa12.47□□□□□ -0.41
SPIDR-211ENST00000519401 A0A1W2PQC6 194 aa12.46□□□□□ -0.41
SPIDR-211ENST00000519401 PHF20L1A8MW92 1017 aa12.46□□□□□ -0.41
SPIDR-211ENST00000519401 F8VZ95 297 aa12.46□□□□□ -0.41
SPIDR-211ENST00000519401 IGF2BP3O00425 579 aaKnown RBP eCLIP12.46□□□□□ -0.41
SPIDR-211ENST00000519401 CYP11B2P19099 503 aa12.46□□□□□ -0.41
SPIDR-211ENST00000519401 VCAM1P19320 739 aa12.46□□□□□ -0.41
SPIDR-211ENST00000519401 MARCKSP29966 332 aaPredicted RBP12.46□□□□□ -0.41
SPIDR-211ENST00000519401 CARSP49589 748 aaKnown RBP12.46□□□□□ -0.41
SPIDR-211ENST00000519401 PEX5P50542 639 aa12.46□□□□□ -0.41
SPIDR-211ENST00000519401 COPS2P61201 443 aa12.46□□□□□ -0.41
SPIDR-211ENST00000519401 CDK17Q00537 523 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 111.5 ms