RNA–Protein interactions for RNA: ENST00000519362.5

SPIDR-210, Transcript of scaffold protein involved in DNA repair, human

TSL 2

Gene SPIDR, Length 1,807 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIDR-210	ENST00000519362	MRPL44	Q9H9J2	332 aa	Known RBP	13.79	□□□□□ -0.2
SPIDR-210	ENST00000519362	CAPN11	Q9UMQ6	739 aa		13.79	□□□□□ -0.2
SPIDR-210	ENST00000519362	TTC26	A0AVF1	554 aa		13.78	□□□□□ -0.2
SPIDR-210	ENST00000519362	PLA2G4B	P0C869	781 aa		13.78	□□□□□ -0.2
SPIDR-210	ENST00000519362	COASY	Q13057	564 aa		13.78	□□□□□ -0.2
SPIDR-210	ENST00000519362	HAUS3	Q68CZ6	603 aa		13.78	□□□□□ -0.2
SPIDR-210	ENST00000519362	CIAPIN1	Q6FI81	312 aa		13.78	□□□□□ -0.2
SPIDR-210	ENST00000519362	CHURC1	Q8WUH1	139 aa		13.78	□□□□□ -0.2
SPIDR-210	ENST00000519362	EEF2KMT	Q96G04	330 aa		13.78	□□□□□ -0.2
SPIDR-210	ENST00000519362	UIMC1	Q96RL1	719 aa		13.78	□□□□□ -0.2
SPIDR-210	ENST00000519362	DNAJC7	Q99615	494 aa		13.78	□□□□□ -0.2
SPIDR-210	ENST00000519362	TTYH3	Q9C0H2	523 aa		13.78	□□□□□ -0.2
SPIDR-210	ENST00000519362	SH2D4A	Q9H788	454 aa		13.78	□□□□□ -0.2
SPIDR-210	ENST00000519362	MYOZ2	Q9NPC6	264 aa		13.78	□□□□□ -0.2
SPIDR-210	ENST00000519362	BMP2K	Q9NSY1	1161 aa	Predicted RBP	13.78	□□□□□ -0.2
SPIDR-210	ENST00000519362	FRMD4A	Q9P2Q2	1039 aa	Predicted RBP	13.78	□□□□□ -0.2
SPIDR-210	ENST00000519362	ABCB11	O95342	1321 aa		13.78	□□□□□ -0.2
SPIDR-210	ENST00000519362	SRCAP	Q6ZRS2	3230 aa		13.78	□□□□□ -0.2
SPIDR-210	ENST00000519362	IGLV3-22	A0A075B6J6	115 aa		13.78	□□□□□ -0.2
SPIDR-210	ENST00000519362	FRMD3	A2A2Y4	597 aa		13.78	□□□□□ -0.2
SPIDR-210	ENST00000519362	NKRF	O15226	690 aa	Known RBP eCLIP	13.78	□□□□□ -0.2
SPIDR-210	ENST00000519362	MSH4	O15457	936 aa		13.78	□□□□□ -0.2
SPIDR-210	ENST00000519362	CYP11B2	P19099	503 aa		13.78	□□□□□ -0.2
SPIDR-210	ENST00000519362	RPA1	P27694	616 aa		13.78	□□□□□ -0.2
SPIDR-210	ENST00000519362	BRCA1	P38398	1863 aa	Known RBP	13.78	□□□□□ -0.2
SPIDR-210	ENST00000519362	SLC12A3	P55017	1021 aa		13.78	□□□□□ -0.2
SPIDR-210	ENST00000519362	NAA30	Q147X3	362 aa	Predicted RBP	13.78	□□□□□ -0.2
SPIDR-210	ENST00000519362	DALRD3	Q5D0E6	543 aa	Known RBP	13.78	□□□□□ -0.2
SPIDR-210	ENST00000519362	CYP26C1	Q6V0L0	522 aa		13.78	□□□□□ -0.2
SPIDR-210	ENST00000519362	FAM160B2	Q86V87	743 aa		13.78	□□□□□ -0.2
SPIDR-210	ENST00000519362	CATSPER3	Q86XQ3	398 aa		13.78	□□□□□ -0.2
SPIDR-210	ENST00000519362	GLIS3	Q8NEA6	775 aa		13.78	□□□□□ -0.2
SPIDR-210	ENST00000519362	TAOK3	Q9H2K8	898 aa		13.78	□□□□□ -0.2
SPIDR-210	ENST00000519362	VAV3	Q9UKW4	847 aa		13.78	□□□□□ -0.2
SPIDR-210	ENST00000519362	PCDHA2	Q9Y5H9	948 aa		13.78	□□□□□ -0.2
SPIDR-210	ENST00000519362	STK24	Q9Y6E0	443 aa		13.78	□□□□□ -0.2
SPIDR-210	ENST00000519362	RASSF10	A6NK89	507 aa		13.77	□□□□□ -0.21
SPIDR-210	ENST00000519362	ASNS	P08243	561 aa		13.77	□□□□□ -0.21
SPIDR-210	ENST00000519362	SPATA31C1	P0DKV0	1188 aa		13.77	□□□□□ -0.21
SPIDR-210	ENST00000519362	MTIF2	P46199	727 aa	Known RBP	13.77	□□□□□ -0.21
SPIDR-210	ENST00000519362	ZCWPW2	Q504Y3	356 aa		13.77	□□□□□ -0.21
SPIDR-210	ENST00000519362	LRRC55	Q6ZSA7	311 aa		13.77	□□□□□ -0.21
SPIDR-210	ENST00000519362	RETREG2	Q8NC44	543 aa		13.77	□□□□□ -0.21
SPIDR-210	ENST00000519362	OR8K1	Q8NGG5	319 aa		13.77	□□□□□ -0.21
SPIDR-210	ENST00000519362	ERMN	Q8TAM6	284 aa		13.77	□□□□□ -0.21
SPIDR-210	ENST00000519362	CYP2W1	Q8TAV3	490 aa		13.77	□□□□□ -0.21
SPIDR-210	ENST00000519362	KIFC2	Q96AC6	838 aa		13.77	□□□□□ -0.21
SPIDR-210	ENST00000519362	ERGIC2	Q96RQ1	377 aa		13.77	□□□□□ -0.21
SPIDR-210	ENST00000519362	WDR24	Q96S15	920 aa		13.77	□□□□□ -0.21
SPIDR-210	ENST00000519362	NOC4L	Q9BVI4	516 aa	Known RBP	13.77	□□□□□ -0.21
SPIDR-210	ENST00000519362	NUP58	Q9BVL2	599 aa		13.77	□□□□□ -0.21
SPIDR-210	ENST00000519362	GLIS2	Q9BZE0	524 aa	Predicted RBP	13.77	□□□□□ -0.21
SPIDR-210	ENST00000519362	PANK4	Q9NVE7	773 aa		13.77	□□□□□ -0.21
SPIDR-210	ENST00000519362	LUC7L2	Q9Y383	392 aa	Known RBP	13.77	□□□□□ -0.21
SPIDR-210	ENST00000519362	PITPNM2	Q9BZ72	1349 aa		13.77	□□□□□ -0.21
SPIDR-210	ENST00000519362	SHTN1	A0MZ66	631 aa		13.76	□□□□□ -0.21
SPIDR-210	ENST00000519362	POTEF	A5A3E0	1075 aa		13.76	□□□□□ -0.21
SPIDR-210	ENST00000519362	PHF20L1	A8MW92	1017 aa		13.76	□□□□□ -0.21
SPIDR-210	ENST00000519362	FGFR1OP	O95684	399 aa	Known RBP	13.76	□□□□□ -0.21
SPIDR-210	ENST00000519362	POTEI	P0CG38	1075 aa		13.76	□□□□□ -0.21
SPIDR-210	ENST00000519362	ZNF280A	P59817	542 aa	Predicted RBP	13.76	□□□□□ -0.21
SPIDR-210	ENST00000519362	GNG11	P61952	73 aa		13.76	□□□□□ -0.21
SPIDR-210	ENST00000519362	TBC1D8B	Q0IIM8	1120 aa		13.76	□□□□□ -0.21
SPIDR-210	ENST00000519362	ARSH	Q5FYA8	562 aa		13.76	□□□□□ -0.21
SPIDR-210	ENST00000519362	FIGN	Q5HY92	759 aa		13.76	□□□□□ -0.21
SPIDR-210	ENST00000519362	FAM26F	Q5R3K3	315 aa		13.76	□□□□□ -0.21
SPIDR-210	ENST00000519362	POTEG	Q6S5H5	508 aa		13.76	□□□□□ -0.21
SPIDR-210	ENST00000519362	POTEE	Q6S8J3	1075 aa		13.76	□□□□□ -0.21
SPIDR-210	ENST00000519362	MYOCD	Q8IZQ8	938 aa		13.76	□□□□□ -0.21
SPIDR-210	ENST00000519362	TBC1D5	Q92609	795 aa		13.76	□□□□□ -0.21
SPIDR-210	ENST00000519362	FEM1B	Q9UK73	627 aa		13.76	□□□□□ -0.21
SPIDR-210	ENST00000519362	SMCHD1	A6NHR9	2005 aa		13.76	□□□□□ -0.21
SPIDR-210	ENST00000519362	NFKBIE	O00221	500 aa		13.76	□□□□□ -0.21
SPIDR-210	ENST00000519362	PES1	O00541	588 aa	Known RBP	13.76	□□□□□ -0.21
SPIDR-210	ENST00000519362	ZBTB7A	O95365	584 aa		13.76	□□□□□ -0.21
SPIDR-210	ENST00000519362	SSB	P05455	408 aa	Known RBP eCLIP	13.76	□□□□□ -0.21
SPIDR-210	ENST00000519362	LRRC41	Q15345	812 aa		13.76	□□□□□ -0.21
SPIDR-210	ENST00000519362	KIF4B	Q2VIQ3	1234 aa		13.76	□□□□□ -0.21
SPIDR-210	ENST00000519362	NCAPH2	Q6IBW4	605 aa		13.76	□□□□□ -0.21
SPIDR-210	ENST00000519362	CCDC174	Q6PII3	467 aa		13.76	□□□□□ -0.21
SPIDR-210	ENST00000519362	WDR59	Q6PJI9	974 aa		13.76	□□□□□ -0.21
SPIDR-210	ENST00000519362	GPBP1	Q86WP2	473 aa		13.76	□□□□□ -0.21
SPIDR-210	ENST00000519362	CCDC65	Q8IXS2	484 aa		13.76	□□□□□ -0.21
SPIDR-210	ENST00000519362	JDP2	Q8WYK2	163 aa		13.76	□□□□□ -0.21
SPIDR-210	ENST00000519362	TEPSIN	Q96N21	525 aa		13.76	□□□□□ -0.21
SPIDR-210	ENST00000519362	DEFB129	Q9H1M3	183 aa		13.76	□□□□□ -0.21
SPIDR-210	ENST00000519362	MRPL11	Q9Y3B7	192 aa	Known RBP	13.76	□□□□□ -0.21
SPIDR-210	ENST00000519362		A0A0U1RQJ8	604 aa		13.75	□□□□□ -0.21
SPIDR-210	ENST00000519362	GCOM1	H8Y6P7	765 aa	Predicted RBP	13.75	□□□□□ -0.21
SPIDR-210	ENST00000519362	CFB	P00751	764 aa		13.75	□□□□□ -0.21
SPIDR-210	ENST00000519362	POLR2M	P0CAP2	368 aa		13.75	□□□□□ -0.21
SPIDR-210	ENST00000519362	PTGER2	P43116	358 aa		13.75	□□□□□ -0.21
SPIDR-210	ENST00000519362	RASA3	Q14644	834 aa		13.75	□□□□□ -0.21
SPIDR-210	ENST00000519362	TNIP1	Q15025	636 aa		13.75	□□□□□ -0.21
SPIDR-210	ENST00000519362	ZYX	Q15942	572 aa	Known RBP	13.75	□□□□□ -0.21
SPIDR-210	ENST00000519362	MEA1	Q16626	185 aa		13.75	□□□□□ -0.21
SPIDR-210	ENST00000519362	VWA3B	Q502W6	1294 aa		13.75	□□□□□ -0.21
SPIDR-210	ENST00000519362	KCTD17	Q8N5Z5	321 aa		13.75	□□□□□ -0.21
SPIDR-210	ENST00000519362	SYT2	Q8N9I0	419 aa	Predicted RBP	13.75	□□□□□ -0.21
SPIDR-210	ENST00000519362	ATRIP	Q8WXE1	791 aa		13.75	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms