RNA–Protein interactions for RNA: ENST00000519309.5

CTNNA1-215, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 869 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-215ENST00000519309 HOXC8P31273 242 aa9.89□□□□□ -0.83
CTNNA1-215ENST00000519309 SLC16A2P36021 539 aa9.89□□□□□ -0.83
CTNNA1-215ENST00000519309 PSEN2P49810 448 aa9.89□□□□□ -0.83
CTNNA1-215ENST00000519309 TCF15Q12870 199 aa9.89□□□□□ -0.83
CTNNA1-215ENST00000519309 MFSD10Q14728 455 aa9.89□□□□□ -0.83
CTNNA1-215ENST00000519309 DGKDQ16760 1214 aa9.89□□□□□ -0.83
CTNNA1-215ENST00000519309 TTBK2Q6IQ55 1244 aa9.89□□□□□ -0.83
CTNNA1-215ENST00000519309 SERINC5Q86VE9 423 aa9.89□□□□□ -0.83
CTNNA1-215ENST00000519309 TMEM192Q8IY95 271 aa9.89□□□□□ -0.83
CTNNA1-215ENST00000519309 C7orf31Q8N865 590 aa9.89□□□□□ -0.83
CTNNA1-215ENST00000519309 DBF4BQ8NFT6 615 aa9.89□□□□□ -0.83
CTNNA1-215ENST00000519309 PPTC7Q8NI37 304 aa9.89□□□□□ -0.83
CTNNA1-215ENST00000519309 CHMP4CQ96CF2 233 aa9.89□□□□□ -0.83
CTNNA1-215ENST00000519309 ANAPC4Q9UJX5 808 aa9.89□□□□□ -0.83
CTNNA1-215ENST00000519309 DDX19BQ9UMR2 479 aa9.89□□□□□ -0.83
CTNNA1-215ENST00000519309 PTPRZ1P23471 2315 aaPredicted RBP9.88□□□□□ -0.83
CTNNA1-215ENST00000519309 MYO15AQ9UKN7 3530 aa9.88□□□□□ -0.83
CTNNA1-215ENST00000519309 CAND2O75155 1236 aa9.88□□□□□ -0.83
CTNNA1-215ENST00000519309 FGRP09769 529 aa9.88□□□□□ -0.83
CTNNA1-215ENST00000519309 ZNF286BP0CG31 522 aa9.88□□□□□ -0.83
CTNNA1-215ENST00000519309 SNHG28P0DPA3 235 aa9.88□□□□□ -0.83
CTNNA1-215ENST00000519309 PDHBP11177 359 aa9.88□□□□□ -0.83
CTNNA1-215ENST00000519309 MS4A1P11836 297 aa9.88□□□□□ -0.83
CTNNA1-215ENST00000519309 CHMP4BP1P59074 171 aa9.88□□□□□ -0.83
CTNNA1-215ENST00000519309 LY6KQ17RY6 165 aa9.88□□□□□ -0.83
CTNNA1-215ENST00000519309 KIAA0753Q2KHM9 967 aa9.88□□□□□ -0.83
CTNNA1-215ENST00000519309 RNF135Q8IUD6 432 aa9.88□□□□□ -0.83
CTNNA1-215ENST00000519309 TOP1MTQ969P6 601 aa9.88□□□□□ -0.83
CTNNA1-215ENST00000519309 GPATCH3Q96I76 525 aa9.88□□□□□ -0.83
CTNNA1-215ENST00000519309 YME1L1Q96TA2 773 aa9.88□□□□□ -0.83
CTNNA1-215ENST00000519309 RC3H2Q9HBD1 1191 aaKnown RBP9.88□□□□□ -0.83
CTNNA1-215ENST00000519309 TTC3P53804 2025 aa9.88□□□□□ -0.83
CTNNA1-215ENST00000519309 FRMPD2Q68DX3 1309 aaPredicted RBP9.87□□□□□ -0.83
CTNNA1-215ENST00000519309 GFRA3O60609 400 aa9.87□□□□□ -0.83
CTNNA1-215ENST00000519309 RB1P06400 928 aa9.87□□□□□ -0.83
CTNNA1-215ENST00000519309 TOP1P11387 765 aaKnown RBP9.87□□□□□ -0.83
CTNNA1-215ENST00000519309 DLX2Q07687 328 aaPredicted RBP9.87□□□□□ -0.83
CTNNA1-215ENST00000519309 ZNF543Q08ER8 600 aa9.87□□□□□ -0.83
CTNNA1-215ENST00000519309 HYAL1Q12794 435 aa9.87□□□□□ -0.83
CTNNA1-215ENST00000519309 HIC1Q14526 733 aa9.87□□□□□ -0.83
CTNNA1-215ENST00000519309 CBX2Q14781 532 aaPredicted RBP9.87□□□□□ -0.83
CTNNA1-215ENST00000519309 ZMYM1Q5SVZ6 1142 aa9.87□□□□□ -0.83
CTNNA1-215ENST00000519309 IER5LQ5T953 404 aa9.87□□□□□ -0.83
CTNNA1-215ENST00000519309 TRIM67Q6ZTA4 783 aa9.87□□□□□ -0.83
CTNNA1-215ENST00000519309 IWS1Q96ST2 819 aa9.87□□□□□ -0.83
CTNNA1-215ENST00000519309 SEC62Q99442 399 aaKnown RBP9.87□□□□□ -0.83
CTNNA1-215ENST00000519309 TMEM47Q9BQJ4 181 aa9.87□□□□□ -0.83
CTNNA1-215ENST00000519309 C11orf84Q9BUA3 381 aaPredicted RBP9.87□□□□□ -0.83
CTNNA1-215ENST00000519309 BCL11AQ9H165 835 aa9.87□□□□□ -0.83
CTNNA1-215ENST00000519309 RWDD3Q9Y3V2 267 aa9.87□□□□□ -0.83
CTNNA1-215ENST00000519309 DCHS1Q96JQ0 3298 aa9.87□□□□□ -0.83
CTNNA1-215ENST00000519309 ZMYM6O95789 1325 aa9.86□□□□□ -0.83
CTNNA1-215ENST00000519309 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.86□□□□□ -0.83
CTNNA1-215ENST00000519309 TMEM221A6NGB7 291 aa9.86□□□□□ -0.83
CTNNA1-215ENST00000519309 RSPH10B2B2RC85 870 aa9.86□□□□□ -0.83
CTNNA1-215ENST00000519309 LOC730098B7Z3J9 87 aa9.86□□□□□ -0.83
CTNNA1-215ENST00000519309 M0R296 226 aa9.86□□□□□ -0.83
CTNNA1-215ENST00000519309 SMARCA5O60264 1052 aaPredicted RBP9.86□□□□□ -0.83
CTNNA1-215ENST00000519309 EYA4O95677 639 aa9.86□□□□□ -0.83
CTNNA1-215ENST00000519309 MMP1P03956 469 aa9.86□□□□□ -0.83
CTNNA1-215ENST00000519309 RSPH10BP0C881 870 aa9.86□□□□□ -0.83
CTNNA1-215ENST00000519309 CTDSPL2Q05D32 466 aa9.86□□□□□ -0.83
CTNNA1-215ENST00000519309 LAMC2Q13753 1193 aa9.86□□□□□ -0.83
CTNNA1-215ENST00000519309 SUGP1Q8IWZ8 645 aaKnown RBP9.86□□□□□ -0.83
CTNNA1-215ENST00000519309 FBXL6Q8N531 539 aa9.86□□□□□ -0.83
CTNNA1-215ENST00000519309 SYTL5Q8TDW5 730 aaPredicted RBP9.86□□□□□ -0.83
CTNNA1-215ENST00000519309 NSUN6Q8TEA1 469 aaKnown RBP9.86□□□□□ -0.83
CTNNA1-215ENST00000519309 SEPT8Q92599 483 aa9.86□□□□□ -0.83
CTNNA1-215ENST00000519309 APBB2Q92870 758 aa9.86□□□□□ -0.83
CTNNA1-215ENST00000519309 CLP1Q92989 425 aaKnown RBP9.86□□□□□ -0.83
CTNNA1-215ENST00000519309 MSLNLQ96KJ4 702 aa9.86□□□□□ -0.83
CTNNA1-215ENST00000519309 ALG1Q9BT22 464 aa9.86□□□□□ -0.83
CTNNA1-215ENST00000519309 TCP11L1Q9NUJ3 509 aa9.86□□□□□ -0.83
CTNNA1-215ENST00000519309 COL20A1Q9P218 1284 aa9.86□□□□□ -0.83
CTNNA1-215ENST00000519309 CD207Q9UJ71 328 aa9.86□□□□□ -0.83
CTNNA1-215ENST00000519309 DDX41Q9UJV9 622 aaKnown RBP9.86□□□□□ -0.83
CTNNA1-215ENST00000519309 MTMR7Q9Y216 660 aa9.86□□□□□ -0.83
CTNNA1-215ENST00000519309 ABCB11O95342 1321 aa9.85□□□□□ -0.83
CTNNA1-215ENST00000519309 ADGRA3Q8IWK6 1321 aa9.85□□□□□ -0.83
CTNNA1-215ENST00000519309 DOCK5Q9H7D0 1870 aa9.85□□□□□ -0.83
CTNNA1-215ENST00000519309 PLXNA4Q9HCM2 1894 aa9.85□□□□□ -0.83
CTNNA1-215ENST00000519309 STXBP3O00186 592 aa9.85□□□□□ -0.83
CTNNA1-215ENST00000519309 RANBP6O60518 1105 aaKnown RBP9.85□□□□□ -0.83
CTNNA1-215ENST00000519309 CTNNB1P35222 781 aa9.85□□□□□ -0.83
CTNNA1-215ENST00000519309 THPOP40225 353 aa9.85□□□□□ -0.83
CTNNA1-215ENST00000519309 ZXDAP98168 799 aa9.85□□□□□ -0.83
CTNNA1-215ENST00000519309 ZNF200P98182 395 aaPredicted RBP9.85□□□□□ -0.83
CTNNA1-215ENST00000519309 GHRHRQ02643 423 aa9.85□□□□□ -0.83
CTNNA1-215ENST00000519309 STXBP2Q15833 593 aa9.85□□□□□ -0.83
CTNNA1-215ENST00000519309 TSHZ3Q63HK5 1081 aa9.85□□□□□ -0.83
CTNNA1-215ENST00000519309 EP400NLQ6ZTU2 488 aa9.85□□□□□ -0.83
CTNNA1-215ENST00000519309 SEPT14Q6ZU15 432 aa9.85□□□□□ -0.83
CTNNA1-215ENST00000519309 CHST3Q7LGC8 479 aa9.85□□□□□ -0.83
CTNNA1-215ENST00000519309 SMRP1Q8NCR6 262 aa9.85□□□□□ -0.83
CTNNA1-215ENST00000519309 PBXIP1Q96AQ6 731 aa9.85□□□□□ -0.83
CTNNA1-215ENST00000519309 IFIH1Q9BYX4 1025 aaKnown RBP9.85□□□□□ -0.83
CTNNA1-215ENST00000519309 IRF2BPLQ9H1B7 796 aa9.85□□□□□ -0.83
CTNNA1-215ENST00000519309 CHMP4BQ9H444 224 aaKnown RBP9.85□□□□□ -0.83
CTNNA1-215ENST00000519309 GPCPD1Q9NPB8 672 aa9.85□□□□□ -0.83
CTNNA1-215ENST00000519309 TTC41PQ6P2S7 1318 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms