RNA–Protein interactions for RNA: ENST00000517785.1

LINC00535-202, long intergenic non-protein coding RNA 535, humanhuman

TSL 3 BASIC

Gene LINC00535, Length 264 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00535-202ENST00000517785 SUGCTQ9HAC7 445 aa6.85□□□□□ -1.31
LINC00535-202ENST00000517785 PLXNA3P51805 1871 aa6.85□□□□□ -1.31
LINC00535-202ENST00000517785 KMT2EQ8IZD2 1858 aa6.85□□□□□ -1.31
LINC00535-202ENST00000517785 PTPRCP08575 1304 aa6.84□□□□□ -1.31
LINC00535-202ENST00000517785 EP300Q09472 2414 aaPredicted RBP6.84□□□□□ -1.31
LINC00535-202ENST00000517785 ESPNB1AK53 854 aa6.84□□□□□ -1.31
LINC00535-202ENST00000517785 VWA5AO00534 786 aa6.84□□□□□ -1.31
LINC00535-202ENST00000517785 SRGAP3O43295 1099 aa6.84□□□□□ -1.31
LINC00535-202ENST00000517785 IDH1O75874 414 aaKnown RBP6.84□□□□□ -1.31
LINC00535-202ENST00000517785 KRT37O76014 449 aa6.84□□□□□ -1.31
LINC00535-202ENST00000517785 PFKMP08237 780 aa6.84□□□□□ -1.31
LINC00535-202ENST00000517785 UQCRFS1P1P0C7P4 283 aa6.84□□□□□ -1.31
LINC00535-202ENST00000517785 CYP2D6P10635 497 aa6.84□□□□□ -1.31
LINC00535-202ENST00000517785 AKR1B1P15121 316 aa6.84□□□□□ -1.31
LINC00535-202ENST00000517785 IRS1P35568 1242 aa6.84□□□□□ -1.31
LINC00535-202ENST00000517785 ZAP70P43403 619 aa6.84□□□□□ -1.31
LINC00535-202ENST00000517785 DEFB103AP81534 67 aa6.84□□□□□ -1.31
LINC00535-202ENST00000517785 ICA1Q05084 483 aa6.84□□□□□ -1.31
LINC00535-202ENST00000517785 FSCN1Q16658 493 aaKnown RBP6.84□□□□□ -1.31
LINC00535-202ENST00000517785 FAM83BQ5T0W9 1011 aa6.84□□□□□ -1.31
LINC00535-202ENST00000517785 TMEM63BQ5T3F8 832 aa6.84□□□□□ -1.31
LINC00535-202ENST00000517785 SNRNP48Q6IEG0 339 aaKnown RBP6.84□□□□□ -1.31
LINC00535-202ENST00000517785 ARMCX2Q7L311 632 aa6.84□□□□□ -1.31
LINC00535-202ENST00000517785 TTC6Q86TZ1 520 aa6.84□□□□□ -1.31
LINC00535-202ENST00000517785 TLK2Q86UE8 772 aa6.84□□□□□ -1.31
LINC00535-202ENST00000517785 TMEM151AQ8N4L1 468 aa6.84□□□□□ -1.31
LINC00535-202ENST00000517785 SVOPQ8N4V2 548 aa6.84□□□□□ -1.31
LINC00535-202ENST00000517785 PNMA1Q8ND90 353 aa6.84□□□□□ -1.31
LINC00535-202ENST00000517785 REPS2Q8NFH8 660 aa6.84□□□□□ -1.31
LINC00535-202ENST00000517785 WHAMMQ8TF30 809 aa6.84□□□□□ -1.31
LINC00535-202ENST00000517785 FGD4Q96M96 766 aa6.84□□□□□ -1.31
LINC00535-202ENST00000517785 ALDH8A1Q9H2A2 487 aaPredicted RBP6.84□□□□□ -1.31
LINC00535-202ENST00000517785 VCPKMTQ9H867 229 aa6.84□□□□□ -1.31
LINC00535-202ENST00000517785 ZNF214Q9UL59 606 aaPredicted RBP6.84□□□□□ -1.31
LINC00535-202ENST00000517785 RIPK3Q9Y572 518 aa6.84□□□□□ -1.31
LINC00535-202ENST00000517785 COL4A6Q14031 1691 aa6.84□□□□□ -1.32
LINC00535-202ENST00000517785 TNKSO95271 1327 aa6.83□□□□□ -1.32
LINC00535-202ENST00000517785 WDR46O15213 610 aaKnown RBP6.83□□□□□ -1.32
LINC00535-202ENST00000517785 DYNC1LI2O43237 492 aaPredicted RBP6.83□□□□□ -1.32
LINC00535-202ENST00000517785 PTGIRP43119 386 aa6.83□□□□□ -1.32
LINC00535-202ENST00000517785 KCNJ6P48051 423 aa6.83□□□□□ -1.32
LINC00535-202ENST00000517785 TNFAIP2Q03169 654 aa6.83□□□□□ -1.32
LINC00535-202ENST00000517785 FAM47CQ5HY64 1035 aa6.83□□□□□ -1.32
LINC00535-202ENST00000517785 MAMDC4Q6UXC1 1216 aa6.83□□□□□ -1.32
LINC00535-202ENST00000517785 EEPD1Q7L9B9 569 aa6.83□□□□□ -1.32
LINC00535-202ENST00000517785 SIAH1Q8IUQ4 282 aa6.83□□□□□ -1.32
LINC00535-202ENST00000517785 CCDC144CPQ8IYA2 1237 aa6.83□□□□□ -1.32
LINC00535-202ENST00000517785 CPXCR1Q8N123 301 aa6.83□□□□□ -1.32
LINC00535-202ENST00000517785 MSL3Q8N5Y2 521 aaKnown RBP6.83□□□□□ -1.32
LINC00535-202ENST00000517785 MAGEB6Q8N7X4 407 aa6.83□□□□□ -1.32
LINC00535-202ENST00000517785 PHOSPHO2Q8TCD6 241 aa6.83□□□□□ -1.32
LINC00535-202ENST00000517785 NEK9Q8TD19 979 aa6.83□□□□□ -1.32
LINC00535-202ENST00000517785 SSH1Q8WYL5 1049 aa6.83□□□□□ -1.32
LINC00535-202ENST00000517785 ATOH1Q92858 354 aaPredicted RBP6.83□□□□□ -1.32
LINC00535-202ENST00000517785 PBXIP1Q96AQ6 731 aa6.83□□□□□ -1.32
LINC00535-202ENST00000517785 DYNLL2Q96FJ2 89 aa6.83□□□□□ -1.32
LINC00535-202ENST00000517785 NUP88Q99567 741 aaPredicted RBP6.83□□□□□ -1.32
LINC00535-202ENST00000517785 MEIS3Q99687 375 aa6.83□□□□□ -1.32
LINC00535-202ENST00000517785 DBNDD2Q9BQY9 259 aa6.83□□□□□ -1.32
LINC00535-202ENST00000517785 KATNBL1Q9H079 304 aa6.83□□□□□ -1.32
LINC00535-202ENST00000517785 AP5M1Q9H0R1 490 aa6.83□□□□□ -1.32
LINC00535-202ENST00000517785 ABHD16BQ9H3Z7 469 aa6.83□□□□□ -1.32
LINC00535-202ENST00000517785 ARHGEF10LQ9HCE6 1279 aa6.83□□□□□ -1.32
LINC00535-202ENST00000517785 LMCD1Q9NZU5 365 aa6.83□□□□□ -1.32
LINC00535-202ENST00000517785 PPP1R9AQ9ULJ8 1098 aa6.83□□□□□ -1.32
LINC00535-202ENST00000517785 BAZ2AQ9UIF9 1905 aaKnown RBP6.83□□□□□ -1.32
LINC00535-202ENST00000517785 ATG2AQ2TAZ0 1938 aa6.82□□□□□ -1.32
LINC00535-202ENST00000517785 ACACBO00763 2458 aa6.82□□□□□ -1.32
LINC00535-202ENST00000517785 DNAJC25-GNG10A0A024R161 153 aa6.82□□□□□ -1.32
LINC00535-202ENST00000517785 LINC01553A4QN01 128 aa6.82□□□□□ -1.32
LINC00535-202ENST00000517785 TMEM221A6NGB7 291 aa6.82□□□□□ -1.32
LINC00535-202ENST00000517785 E9PSI1 815 aa6.82□□□□□ -1.32
LINC00535-202ENST00000517785 RNF225M0QZC1 329 aaPredicted RBP6.82□□□□□ -1.32
LINC00535-202ENST00000517785 M0R296 226 aa6.82□□□□□ -1.32
LINC00535-202ENST00000517785 CABYRO75952 493 aa6.82□□□□□ -1.32
LINC00535-202ENST00000517785 CSPG5O95196 566 aa6.82□□□□□ -1.32
LINC00535-202ENST00000517785 RFC5P40937 340 aa6.82□□□□□ -1.32
LINC00535-202ENST00000517785 VCPP55072 806 aaKnown RBP6.82□□□□□ -1.32
LINC00535-202ENST00000517785 CHMP4BP1P59074 171 aa6.82□□□□□ -1.32
LINC00535-202ENST00000517785 WDR5P61964 334 aaKnown RBP6.82□□□□□ -1.32
LINC00535-202ENST00000517785 CNTN2Q02246 1040 aa6.82□□□□□ -1.32
LINC00535-202ENST00000517785 GABPAQ06546 454 aa6.82□□□□□ -1.32
LINC00535-202ENST00000517785 TMEM179Q6ZVK1 233 aa6.82□□□□□ -1.32
LINC00535-202ENST00000517785 ASCL5Q7RTU5 278 aa6.82□□□□□ -1.32
LINC00535-202ENST00000517785 RNF135Q8IUD6 432 aa6.82□□□□□ -1.32
LINC00535-202ENST00000517785 ADHFE1Q8IWW8 467 aa6.82□□□□□ -1.32
LINC00535-202ENST00000517785 SUGP1Q8IWZ8 645 aaKnown RBP6.82□□□□□ -1.32
LINC00535-202ENST00000517785 FBXO16Q8IX29 292 aaPredicted RBP6.82□□□□□ -1.32
LINC00535-202ENST00000517785 ANKRD35Q8N283 1001 aa6.82□□□□□ -1.32
LINC00535-202ENST00000517785 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.82□□□□□ -1.32
LINC00535-202ENST00000517785 TGS1Q96RS0 853 aaKnown RBP6.82□□□□□ -1.32
LINC00535-202ENST00000517785 CRBNQ96SW2 442 aa6.82□□□□□ -1.32
LINC00535-202ENST00000517785 C17orf80Q9BSJ5 609 aa6.82□□□□□ -1.32
LINC00535-202ENST00000517785 RAVER2Q9HCJ3 691 aaKnown RBP6.82□□□□□ -1.32
LINC00535-202ENST00000517785 PDGFCQ9NRA1 345 aa6.82□□□□□ -1.32
LINC00535-202ENST00000517785 HOMER2Q9NSB8 354 aa6.82□□□□□ -1.32
LINC00535-202ENST00000517785 MCM9Q9NXL9 1143 aa6.82□□□□□ -1.32
LINC00535-202ENST00000517785 ADAMTS5Q9UNA0 930 aa6.82□□□□□ -1.32
LINC00535-202ENST00000517785 GNEQ9Y223 722 aaKnown RBP6.82□□□□□ -1.32
LINC00535-202ENST00000517785 TMX2Q9Y320 296 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms